RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 OR2T10Q8NGZ9 312 aa12.55□□□□□ -0.4
MKS1-204ENST00000537529 OR1P1Q8NH06 330 aa12.55□□□□□ -0.4
MKS1-204ENST00000537529 DPM3Q9P2X0 92 aa12.55□□□□□ -0.4
MKS1-204ENST00000537529 TNCP24821 2201 aa12.55□□□□□ -0.4
MKS1-204ENST00000537529 IGKV1D-37A0A075B6S9 117 aa12.55□□□□□ -0.4
MKS1-204ENST00000537529 A0A1W2PPQ1 181 aa12.55□□□□□ -0.4
MKS1-204ENST00000537529 C9JCJ5 164 aa12.55□□□□□ -0.4
MKS1-204ENST00000537529 CRYGCP07315 174 aa12.55□□□□□ -0.4
MKS1-204ENST00000537529 PLGLAQ15195 96 aa12.55□□□□□ -0.4
MKS1-204ENST00000537529 C4orf17Q53FE4 359 aa12.55□□□□□ -0.4
MKS1-204ENST00000537529 C10orf113Q5VZT2 155 aa12.55□□□□□ -0.4
MKS1-204ENST00000537529 FRZBQ92765 325 aa12.55□□□□□ -0.4
MKS1-204ENST00000537529 SFRP2Q96HF1 295 aa12.55□□□□□ -0.4
MKS1-204ENST00000537529 IMMP2LQ96T52 175 aa12.55□□□□□ -0.4
MKS1-204ENST00000537529 FBXL15Q9H469 300 aa12.55□□□□□ -0.4
MKS1-204ENST00000537529 AURKAIP1Q9NWT8 199 aaPredicted RBP12.55□□□□□ -0.4
MKS1-204ENST00000537529 LY96Q9Y6Y9 160 aa12.55□□□□□ -0.4
MKS1-204ENST00000537529 TIMM23O14925 209 aa12.54□□□□□ -0.4
MKS1-204ENST00000537529 TRGC1P0CF51 173 aa12.54□□□□□ -0.4
MKS1-204ENST00000537529 OR4X1Q8NH49 305 aa12.54□□□□□ -0.4
MKS1-204ENST00000537529 BTF3L4Q96K17 158 aa12.54□□□□□ -0.4
MKS1-204ENST00000537529 SLC25A2Q9BXI2 301 aa12.54□□□□□ -0.4
MKS1-204ENST00000537529 A0A1W2PRE2 83 aa12.53□□□□□ -0.4
MKS1-204ENST00000537529 PGPEP1LA6NFU8 196 aa12.53□□□□□ -0.4
MKS1-204ENST00000537529 TEX22C9J3V5 150 aa12.53□□□□□ -0.4
MKS1-204ENST00000537529 IGHV3-48P01763 117 aa12.53□□□□□ -0.4
MKS1-204ENST00000537529 PRTN3P24158 256 aa12.53□□□□□ -0.4
MKS1-204ENST00000537529 GPR6P46095 362 aaPredicted RBP12.53□□□□□ -0.4
MKS1-204ENST00000537529 CDX1P47902 265 aaPredicted RBP12.53□□□□□ -0.4
MKS1-204ENST00000537529 MFAP2P55001 183 aa12.53□□□□□ -0.4
MKS1-204ENST00000537529 PAX2Q02962 417 aa12.53□□□□□ -0.4
MKS1-204ENST00000537529 ZNF90Q03938 601 aa12.53□□□□□ -0.4
MKS1-204ENST00000537529 MRPL36Q9P0J6 103 aaKnown RBP12.53□□□□□ -0.4
MKS1-204ENST00000537529 F11RQ9Y624 299 aaKnown RBP12.53□□□□□ -0.4
MKS1-204ENST00000537529 PHOX2AO14813 284 aa12.53□□□□□ -0.4
MKS1-204ENST00000537529 OR10J4P0C629 311 aa12.53□□□□□ -0.4
MKS1-204ENST00000537529 FAM3BP58499 235 aaPredicted RBP12.53□□□□□ -0.4
MKS1-204ENST00000537529 UBE2L3P68036 154 aaKnown RBP12.53□□□□□ -0.4
MKS1-204ENST00000537529 LCN2P80188 198 aa12.53□□□□□ -0.4
MKS1-204ENST00000537529 OR5AU1Q8NGC0 362 aa12.53□□□□□ -0.4
MKS1-204ENST00000537529 SRSF12Q8WXF0 261 aaKnown RBP12.53□□□□□ -0.4
MKS1-204ENST00000537529 FAM167A-AS1Q96KT0 104 aa12.53□□□□□ -0.4
MKS1-204ENST00000537529 TRGV9Q99603 122 aa12.53□□□□□ -0.4
MKS1-204ENST00000537529 SRSF8Q9BRL6 282 aaKnown RBP12.53□□□□□ -0.4
MKS1-204ENST00000537529 TNFRSF19Q9NS68 423 aa12.53□□□□□ -0.4
MKS1-204ENST00000537529 ELOA3CA0A087WX78 387 aaPredicted RBP12.52□□□□□ -0.4
MKS1-204ENST00000537529 ODF3BA8MYP8 253 aa12.52□□□□□ -0.4
MKS1-204ENST00000537529 TYMSP04818 313 aa12.52□□□□□ -0.4
MKS1-204ENST00000537529 KIR3DL3Q8N743 410 aa12.52□□□□□ -0.4
MKS1-204ENST00000537529 OCC1Q8TAD7 63 aa12.52□□□□□ -0.4
MKS1-204ENST00000537529 ITLN2Q8WWU7 325 aaPredicted RBP12.52□□□□□ -0.4
MKS1-204ENST00000537529 ZNF355PQ9NSJ1 428 aa12.52□□□□□ -0.4
MKS1-204ENST00000537529 MALRD1Q5VYJ5 2156 aa12.52□□□□□ -0.41
MKS1-204ENST00000537529 ADGRG4Q8IZF6 3080 aa12.52□□□□□ -0.41
MKS1-204ENST00000537529 MMDQ15546 238 aa12.52□□□□□ -0.41
MKS1-204ENST00000537529 LDLRAD2Q5SZI1 272 aa12.52□□□□□ -0.41
MKS1-204ENST00000537529 OR10G8Q8NGN5 311 aa12.52□□□□□ -0.41
MKS1-204ENST00000537529 UBTD1Q9HAC8 227 aa12.52□□□□□ -0.41
MKS1-204ENST00000537529 TRAV5A0A0B4J249 113 aa12.51□□□□□ -0.41
MKS1-204ENST00000537529 A0A1W2PPR1 153 aa12.51□□□□□ -0.41
MKS1-204ENST00000537529 GGTLC3B5MD39 225 aa12.51□□□□□ -0.41
MKS1-204ENST00000537529 APELAP0DMC3 54 aa12.51□□□□□ -0.41
MKS1-204ENST00000537529 HNF1AP20823 631 aa12.51□□□□□ -0.41
MKS1-204ENST00000537529 CRYBB3P26998 211 aa12.51□□□□□ -0.41
MKS1-204ENST00000537529 CDKN1AP38936 164 aa12.51□□□□□ -0.41
MKS1-204ENST00000537529 KLRD1Q13241 179 aa12.51□□□□□ -0.41
MKS1-204ENST00000537529 SSX2Q16385 188 aa12.51□□□□□ -0.41
MKS1-204ENST00000537529 CLEC12BQ2HXU8 276 aa12.51□□□□□ -0.41
MKS1-204ENST00000537529 MORN5Q5VZ52 161 aa12.51□□□□□ -0.41
MKS1-204ENST00000537529 TEX38Q6PEX7 206 aa12.51□□□□□ -0.41
MKS1-204ENST00000537529 C1orf122Q6ZSJ8 110 aa12.51□□□□□ -0.41
MKS1-204ENST00000537529 TMEM116Q8NCL8 245 aa12.51□□□□□ -0.41
MKS1-204ENST00000537529 EAF1Q96JC9 268 aaPredicted RBP12.51□□□□□ -0.41
MKS1-204ENST00000537529 PAXXQ9BUH6 204 aa12.51□□□□□ -0.41
MKS1-204ENST00000537529 HILPDAQ9Y5L2 63 aa12.51□□□□□ -0.41
MKS1-204ENST00000537529 HELTA6NFD8 242 aa12.5□□□□□ -0.41
MKS1-204ENST00000537529 A6NNC1 897 aa12.5□□□□□ -0.41
MKS1-204ENST00000537529 NBR2O15453 112 aa12.5□□□□□ -0.41
MKS1-204ENST00000537529 MOSP00540 346 aa12.5□□□□□ -0.41
MKS1-204ENST00000537529 GNG4P50150 75 aa12.5□□□□□ -0.41
MKS1-204ENST00000537529 PATE2Q6UY27 113 aa12.5□□□□□ -0.41
MKS1-204ENST00000537529 CFHR4Q92496 578 aa12.5□□□□□ -0.41
MKS1-204ENST00000537529 PERPQ96FX8 193 aa12.5□□□□□ -0.41
MKS1-204ENST00000537529 PCP4L1A6NKN8 68 aa12.5□□□□□ -0.41
MKS1-204ENST00000537529 CNIH1O95406 144 aa12.5□□□□□ -0.41
MKS1-204ENST00000537529 UQCRFS1P47985 274 aa12.5□□□□□ -0.41
MKS1-204ENST00000537529 FOXL1Q12952 345 aa12.5□□□□□ -0.41
MKS1-204ENST00000537529 C19orf35Q6ZS72 473 aa12.5□□□□□ -0.41
MKS1-204ENST00000537529 FCN1O00602 326 aa12.49□□□□□ -0.41
MKS1-204ENST00000537529 GNLYP22749 145 aa12.49□□□□□ -0.41
MKS1-204ENST00000537529 S100A2P29034 98 aa12.49□□□□□ -0.41
MKS1-204ENST00000537529 SUMO1P63165 101 aaKnown RBP12.49□□□□□ -0.41
MKS1-204ENST00000537529 CENPWQ5EE01 88 aa12.49□□□□□ -0.41
MKS1-204ENST00000537529 STXBP6Q8NFX7 210 aa12.49□□□□□ -0.41
MKS1-204ENST00000537529 OR51M1Q9H341 326 aa12.49□□□□□ -0.41
MKS1-204ENST00000537529 K7EN84 100 aa12.49□□□□□ -0.41
MKS1-204ENST00000537529 EFNA4P52798 201 aa12.49□□□□□ -0.41
MKS1-204ENST00000537529 CCDC144NLQ6NUI1 221 aa12.49□□□□□ -0.41
MKS1-204ENST00000537529 LINC00305Q7Z4B0 112 aa12.49□□□□□ -0.41
MKS1-204ENST00000537529 VMO1Q7Z5L0 202 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms