RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 PROCRQ9UNN8 238 aa9.01□□□□□ -0.97
CLSTN3-207ENST00000537408 SYNGR1O43759 233 aa9.01□□□□□ -0.97
CLSTN3-207ENST00000537408 OPRK1P41145 380 aa9.01□□□□□ -0.97
CLSTN3-207ENST00000537408 PCOLCEQ15113 449 aa9.01□□□□□ -0.97
CLSTN3-207ENST00000537408 GCSAMLQ5JQS6 135 aa9.01□□□□□ -0.97
CLSTN3-207ENST00000537408 SLC25A47Q6Q0C1 308 aa9.01□□□□□ -0.97
CLSTN3-207ENST00000537408 BOD1L2Q8IYS8 172 aa9.01□□□□□ -0.97
CLSTN3-207ENST00000537408 TMEM167BQ9NRX6 74 aa9.01□□□□□ -0.97
CLSTN3-207ENST00000537408 IL36RNQ9UBH0 155 aa9.01□□□□□ -0.97
CLSTN3-207ENST00000537408 DIDO1Q9BTC0 2240 aaKnown RBP9.01□□□□□ -0.97
CLSTN3-207ENST00000537408 ADAMTS9Q9P2N4 1935 aa9.01□□□□□ -0.97
CLSTN3-207ENST00000537408 SIVA1O15304 175 aa9□□□□□ -0.97
CLSTN3-207ENST00000537408 IGHV1-24A0A0C4DH33 117 aa9□□□□□ -0.97
CLSTN3-207ENST00000537408 hADV38S2A0JD32 116 aa9□□□□□ -0.97
CLSTN3-207ENST00000537408 C17orf51A8MQB3 221 aa9□□□□□ -0.97
CLSTN3-207ENST00000537408 B5MCH6 92 aa9□□□□□ -0.97
CLSTN3-207ENST00000537408 TGFBR3LH3BV60 316 aa9□□□□□ -0.97
CLSTN3-207ENST00000537408 OR2J3O76001 311 aa9□□□□□ -0.97
CLSTN3-207ENST00000537408 CCL3P10147 92 aa9□□□□□ -0.97
CLSTN3-207ENST00000537408 SRSF6Q13247 344 aaKnown RBP9□□□□□ -0.97
CLSTN3-207ENST00000537408 SPAG8Q99932 426 aaPredicted RBP9□□□□□ -0.97
CLSTN3-207ENST00000537408 SIGLEC8Q9NYZ4 499 aa9□□□□□ -0.97
CLSTN3-207ENST00000537408 WDR83OSQ9Y284 106 aa9□□□□□ -0.97
CLSTN3-207ENST00000537408 SPTBN1Q01082 2364 aaKnown RBP9□□□□□ -0.97
CLSTN3-207ENST00000537408 AREGP15514 252 aa9□□□□□ -0.97
CLSTN3-207ENST00000537408 CITED1Q99966 193 aa9□□□□□ -0.97
CLSTN3-207ENST00000537408 UFC1Q9Y3C8 167 aa9□□□□□ -0.97
CLSTN3-207ENST00000537408 BRCA2P51587 3418 aa9□□□□□ -0.97
CLSTN3-207ENST00000537408 IGLV3-12A0A075B6K2 115 aa9□□□□□ -0.97
CLSTN3-207ENST00000537408 DHHO43323 396 aa9□□□□□ -0.97
CLSTN3-207ENST00000537408 IGLV3-1P01715 115 aa9□□□□□ -0.97
CLSTN3-207ENST00000537408 IGHV3-7P01780 117 aa9□□□□□ -0.97
CLSTN3-207ENST00000537408 STPG3Q8N7X2 389 aa9□□□□□ -0.97
CLSTN3-207ENST00000537408 YAE1D1Q9NRH1 226 aa9□□□□□ -0.97
CLSTN3-207ENST00000537408 PCNX3Q9H6A9 2034 aa8.99□□□□□ -0.97
CLSTN3-207ENST00000537408 KIR2DL2P43627 348 aaPredicted RBP8.99□□□□□ -0.97
CLSTN3-207ENST00000537408 GUSBP1Q15486 140 aa8.99□□□□□ -0.97
CLSTN3-207ENST00000537408 FGFRL1Q8N441 504 aa8.99□□□□□ -0.97
CLSTN3-207ENST00000537408 RAX2Q96IS3 184 aa8.99□□□□□ -0.97
CLSTN3-207ENST00000537408 ENY2Q9NPA8 101 aa8.99□□□□□ -0.97
CLSTN3-207ENST00000537408 WISP1O95388 367 aa8.99□□□□□ -0.97
CLSTN3-207ENST00000537408 VWC2Q2TAL6 325 aa8.99□□□□□ -0.97
CLSTN3-207ENST00000537408 GCSAMQ8N6F7 178 aa8.99□□□□□ -0.97
CLSTN3-207ENST00000537408 PRORYQ9H606 182 aa8.99□□□□□ -0.97
CLSTN3-207ENST00000537408 CREBBPQ92793 2442 aa8.99□□□□□ -0.97
CLSTN3-207ENST00000537408 SH2D7A6NKC9 451 aaPredicted RBP8.99□□□□□ -0.97
CLSTN3-207ENST00000537408 SMAD7O15105 426 aaKnown RBP8.99□□□□□ -0.97
CLSTN3-207ENST00000537408 DKK1O94907 266 aa8.99□□□□□ -0.97
CLSTN3-207ENST00000537408 ETDBQ3ZM63 59 aa8.99□□□□□ -0.97
CLSTN3-207ENST00000537408 SPATA31B1PQ5VZV4 182 aa8.99□□□□□ -0.97
CLSTN3-207ENST00000537408 ATP5L2Q7Z4Y8 100 aa8.99□□□□□ -0.97
CLSTN3-207ENST00000537408 SH2D2AQ9NP31 389 aa8.99□□□□□ -0.97
CLSTN3-207ENST00000537408 DUSP13Q9UII6 198 aa8.99□□□□□ -0.97
CLSTN3-207ENST00000537408 PHF3Q92576 2039 aaKnown RBP8.99□□□□□ -0.97
CLSTN3-207ENST00000537408 CEP295Q9C0D2 2601 aa8.98□□□□□ -0.97
CLSTN3-207ENST00000537408 GCSHP23434 173 aa8.98□□□□□ -0.97
CLSTN3-207ENST00000537408 GAGE13Q4V321 117 aa8.98□□□□□ -0.97
CLSTN3-207ENST00000537408 VCX2Q9H322 139 aa8.98□□□□□ -0.97
CLSTN3-207ENST00000537408 C5orf63A6NC05 138 aa8.98□□□□□ -0.97
CLSTN3-207ENST00000537408 CSN1S1P47710 185 aa8.98□□□□□ -0.97
CLSTN3-207ENST00000537408 ZNF562Q6V9R5 426 aa8.98□□□□□ -0.97
CLSTN3-207ENST00000537408 OR10X1Q8NGY0 326 aa8.98□□□□□ -0.97
CLSTN3-207ENST00000537408 NEU4Q8WWR8 484 aaPredicted RBP8.98□□□□□ -0.97
CLSTN3-207ENST00000537408 ZNF716A6NP11 495 aa8.98□□□□□ -0.97
CLSTN3-207ENST00000537408 E9PLN8 166 aa8.98□□□□□ -0.97
CLSTN3-207ENST00000537408 APOMO95445 188 aa8.98□□□□□ -0.97
CLSTN3-207ENST00000537408 IGKV1-39P01597 117 aa8.98□□□□□ -0.97
CLSTN3-207ENST00000537408 IGKV1D-39P04432 117 aa8.98□□□□□ -0.97
CLSTN3-207ENST00000537408 CATR1Q13166 79 aa8.98□□□□□ -0.97
CLSTN3-207ENST00000537408 ZNF585BQ52M93 769 aa8.98□□□□□ -0.97
CLSTN3-207ENST00000537408 ZFAND6Q6FIF0 208 aa8.98□□□□□ -0.97
CLSTN3-207ENST00000537408 ZNF502Q8TBZ5 544 aa8.98□□□□□ -0.97
CLSTN3-207ENST00000537408 SPXQ9BT56 116 aa8.98□□□□□ -0.97
CLSTN3-207ENST00000537408 ZNF391Q9UJN7 358 aa8.98□□□□□ -0.97
CLSTN3-207ENST00000537408 EPG5Q9HCE0 2579 aa8.98□□□□□ -0.97
CLSTN3-207ENST00000537408 IGKV1-12A0A0C4DH73 117 aa8.97□□□□□ -0.97
CLSTN3-207ENST00000537408 A0A1B0GWB2 263 aa8.97□□□□□ -0.97
CLSTN3-207ENST00000537408 A0A1W2PRD5 423 aa8.97□□□□□ -0.97
CLSTN3-207ENST00000537408 A0A1W2PRF3 423 aa8.97□□□□□ -0.97
CLSTN3-207ENST00000537408 A0A1W2PRM7 423 aa8.97□□□□□ -0.97
CLSTN3-207ENST00000537408 ZG16O60844 167 aa8.97□□□□□ -0.97
CLSTN3-207ENST00000537408 IGKV1D-12P01611 117 aa8.97□□□□□ -0.97
CLSTN3-207ENST00000537408 FCGR2BP31994 310 aaPredicted RBP8.97□□□□□ -0.97
CLSTN3-207ENST00000537408 NRN1LQ496H8 165 aa8.97□□□□□ -0.97
CLSTN3-207ENST00000537408 LINC01545Q5VT33 79 aa8.97□□□□□ -0.97
CLSTN3-207ENST00000537408 TEX29Q8N6K0 151 aa8.97□□□□□ -0.97
CLSTN3-207ENST00000537408 SPANXA1Q9NS26 97 aa8.97□□□□□ -0.97
CLSTN3-207ENST00000537408 TNFRSF18Q9Y5U5 241 aa8.97□□□□□ -0.97
CLSTN3-207ENST00000537408 IGKV1-27A0A075B6S5 117 aa8.97□□□□□ -0.97
CLSTN3-207ENST00000537408 G6PCP35575 357 aa8.97□□□□□ -0.97
CLSTN3-207ENST00000537408 ATP5G2Q06055 141 aa8.97□□□□□ -0.97
CLSTN3-207ENST00000537408 KLRD1Q13241 179 aa8.97□□□□□ -0.97
CLSTN3-207ENST00000537408 H2BFWTQ7Z2G1 175 aa8.97□□□□□ -0.97
CLSTN3-207ENST00000537408 LRRC29Q8WV35 223 aa8.97□□□□□ -0.97
CLSTN3-207ENST00000537408 SSBP3Q9BWW4 388 aaPredicted RBP8.97□□□□□ -0.97
CLSTN3-207ENST00000537408 LOC102723996A0A087X1L8 192 aa8.97□□□□□ -0.97
CLSTN3-207ENST00000537408 CLDN14O95500 239 aa8.97□□□□□ -0.97
CLSTN3-207ENST00000537408 B4GALT1P15291 398 aa8.97□□□□□ -0.97
CLSTN3-207ENST00000537408 WFDC2Q14508 124 aa8.97□□□□□ -0.97
CLSTN3-207ENST00000537408 MIC13Q5XKP0 118 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms