RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 FAM24BQ8N5W8 94 aa3.79□□□□□ -1.8
SNHG1-204ENST00000537068 DUSP18Q8NEJ0 188 aa3.79□□□□□ -1.8
SNHG1-204ENST00000537068 DCANP1Q8TF63 244 aa3.79□□□□□ -1.8
SNHG1-204ENST00000537068 SLC25A46Q96AG3 418 aa3.79□□□□□ -1.8
SNHG1-204ENST00000537068 GRAMD2BQ96HH9 432 aa3.79□□□□□ -1.8
SNHG1-204ENST00000537068 CNBD2Q96M20 576 aa3.79□□□□□ -1.8
SNHG1-204ENST00000537068 TSC22D3Q99576 134 aa3.79□□□□□ -1.8
SNHG1-204ENST00000537068 YTHDF1Q9BYJ9 559 aaKnown RBP3.79□□□□□ -1.8
SNHG1-204ENST00000537068 MS4A6AQ9H2W1 248 aa3.79□□□□□ -1.8
SNHG1-204ENST00000537068 RNF167Q9H6Y7 350 aa3.79□□□□□ -1.8
SNHG1-204ENST00000537068 HEYLQ9NQ87 328 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-204ENST00000537068 DIABLOQ9NR28 239 aa3.79□□□□□ -1.8
SNHG1-204ENST00000537068 RAB26Q9ULW5 256 aa3.79□□□□□ -1.8
SNHG1-204ENST00000537068 SSR3Q9UNL2 185 aa3.79□□□□□ -1.8
SNHG1-204ENST00000537068 NSG2Q9Y328 171 aa3.79□□□□□ -1.8
SNHG1-204ENST00000537068 PCLOQ9Y6V0 5065 aa3.79□□□□□ -1.8
SNHG1-204ENST00000537068 IGHV4-4A0A075B6R2 117 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 IGHV3-49A0A0A0MS15 119 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 TRAV10A0A0B4J240 114 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 A0A1B0GU03 582 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 LOC102723971A0A1B0GUV8 181 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 IGLL5B9A064 214 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 ANKRD65E5RJM6 399 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 K7EQG2 157 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 GPR31O00270 319 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 DEFB4AO15263 64 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 SNAPC5O75971 98 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 CA1P00915 261 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-204ENST00000537068 P0C879 139 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 BTF3P20290 206 aaKnown RBP3.78□□□□□ -1.8
SNHG1-204ENST00000537068 CRYBB3P26998 211 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 DEFB131AP59861 70 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 HSPE1P61604 102 aaKnown RBP3.78□□□□□ -1.8
SNHG1-204ENST00000537068 PRCDQ00LT1 54 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 IDNKQ5T6J7 187 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 MORN3Q6PF18 240 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-204ENST00000537068 IZUMO2Q6UXV1 221 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 ZNF600Q6ZNG1 722 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 GBGT1Q8N5D6 347 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 UBAC2Q8NBM4 344 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 FCGR1BQ92637 280 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 CMTM3Q96MX0 182 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 GINS3Q9BRX5 216 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 ZNF2Q9BSG1 426 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-204ENST00000537068 RNF126Q9BV68 326 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 FXYD6Q9H0Q3 95 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 EHFQ9NZC4 300 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 FBXL17Q9UF56 701 aa3.78□□□□□ -1.8
SNHG1-204ENST00000537068 NACAE9PAV3 2078 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 IGKV3-7A0A075B6H7 116 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 IGHV3OR16-13A0A075B7E8 117 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 IGHV3-74A0A0B4J1X5 117 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 IGHV4-28A0A0C4DH34 117 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 MEIS3P1A6NDR6 274 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 RTL8CO15255 209 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 ST8SIA3O43173 380 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 GNG7O60262 68 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 YIF1AO95070 293 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 PMP2P02689 132 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 AMBPP02760 352 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 FCER2P06734 321 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 SPP1P10451 314 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 PSMB9P28065 219 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 HLA-DMBP28068 263 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 NPBWR1P48145 328 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 TFPI2P48307 235 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 HERV-K104P61576 105 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 MXD1Q05195 221 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 C12orf74Q32Q52 190 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 LGALS9BQ3B8N2 356 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 BSXQ3C1V8 233 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 LEMD1Q68G75 181 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 LPCAT3Q6P1A2 487 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 Q6ZTC4 211 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 CROCCP3Q8IVE0 287 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 STHQ8IWL8 128 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 CMTM1Q8IZ96 169 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 POM121L12Q8N7R1 296 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 OR6F1Q8NGZ6 308 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 GPX8Q8TED1 209 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 TRIM63Q969Q1 353 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 S100A16Q96FQ6 103 aaKnown RBP3.77□□□□□ -1.81
SNHG1-204ENST00000537068 HINT2Q9BX68 163 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 VCX3BQ9H321 246 aa3.77□□□□□ -1.81
SNHG1-204ENST00000537068 PUS1Q9Y606 427 aaKnown RBP eCLIP3.77□□□□□ -1.81
SNHG1-204ENST00000537068 A0A0B4J293 547 aa3.76□□□□□ -1.81
SNHG1-204ENST00000537068 A0A1W2PS18 150 aa3.76□□□□□ -1.81
SNHG1-204ENST00000537068 DNASE2O00115 360 aaPredicted RBP3.76□□□□□ -1.81
SNHG1-204ENST00000537068 CLN5O75503 358 aa3.76□□□□□ -1.81
SNHG1-204ENST00000537068 IGHV3-48P01763 117 aa3.76□□□□□ -1.81
SNHG1-204ENST00000537068 EIF4EP06730 217 aaKnown RBP3.76□□□□□ -1.81
SNHG1-204ENST00000537068 RNASE2P10153 161 aaKnown RBP3.76□□□□□ -1.81
SNHG1-204ENST00000537068 C4BPBP20851 252 aa3.76□□□□□ -1.81
SNHG1-204ENST00000537068 NPPCP23582 126 aa3.76□□□□□ -1.81
SNHG1-204ENST00000537068 PRSS3P35030 304 aa3.76□□□□□ -1.81
SNHG1-204ENST00000537068 RPL5P46777 297 aaKnown RBP3.76□□□□□ -1.81
SNHG1-204ENST00000537068 TAS2R46P59540 309 aa3.76□□□□□ -1.81
SNHG1-204ENST00000537068 ERHP84090 104 aaKnown RBP3.76□□□□□ -1.81
SNHG1-204ENST00000537068 AARDQ4LEZ3 155 aa3.76□□□□□ -1.81
SNHG1-204ENST00000537068 UBE2NLQ5JXB2 153 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms