RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 RPL39P5Q59GN2 51 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 DEFB124Q8NES8 71 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 ZNF479Q96JC4 524 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 LSM4Q9Y4Z0 139 aaKnown RBP4.5□□□□□ -1.69
PTPRD-213ENST00000537002 ATG2BQ96BY7 2078 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 HCP5Q6MZN7 132 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 MDP1Q86V88 176 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 SHISA5Q8N114 240 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 EML5Q05BV3 1969 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 J3QW42 95 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 ZNF83P51522 516 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 TMPRSS3P57727 454 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 TNFRSF19Q9NS68 423 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 ZNF581Q9P0T4 197 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 KLF13Q9Y2Y9 288 aaPredicted RBP4.5□□□□□ -1.69
PTPRD-213ENST00000537002 TRIP6Q15654 476 aaKnown RBP4.5□□□□□ -1.69
PTPRD-213ENST00000537002 GAB4Q2WGN9 574 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 GOLT1AQ6ZVE7 132 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 OR1L8Q8NGR8 309 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 TMUB1Q9BVT8 246 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 KIAA2026Q5HYC2 2103 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 KBTBD11-OT1A0A1B0GTJ5 212 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 F8W1H4 67 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 TAX1BP3O14907 124 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 CELA2AP08217 269 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 HSPE1P61604 102 aaKnown RBP4.5□□□□□ -1.69
PTPRD-213ENST00000537002 MRPL32Q9BYC8 188 aaKnown RBP4.5□□□□□ -1.69
PTPRD-213ENST00000537002 SRXN1Q9BYN0 137 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 OR11H12B2RN74 326 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 GFRA1P56159 465 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 KIR3DS1Q14943 382 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 GUSBP1Q15486 140 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 SPANXN1Q5VSR9 72 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 MBNL2Q5VZF2 373 aaKnown RBP4.5□□□□□ -1.69
PTPRD-213ENST00000537002 OR11H1Q8NG94 326 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 OR11H2Q8NH07 326 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 TSKUQ8WUA8 353 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 TMEM54Q969K7 222 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 LMO7DNF2Z398 122 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 PRB4P10163 310 aaPredicted RBP4.5□□□□□ -1.69
PTPRD-213ENST00000537002 MEOX1P50221 254 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 GAGE13Q4V321 117 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 Q6ZS92 163 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 OBSL1O75147 1896 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 TRAV8-2A0A0B4J237 113 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 C22orf46C9J442 243 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 SPINK14Q6IE38 97 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 CLEC7AQ9BXN2 247 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 TCF20Q9UGU0 1960 aaKnown RBP4.49□□□□□ -1.69
PTPRD-213ENST00000537002 ZNF716A6NP11 495 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 SHISA9B4DS77 424 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 RAB9AP51151 201 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 FXYD7P58549 80 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 GUSBP11Q6P575 273 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 ADAMTSL5Q6ZMM2 481 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 LINC00305Q7Z4B0 112 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 NFAM1Q8NET5 270 aaPredicted RBP4.49□□□□□ -1.69
PTPRD-213ENST00000537002 MYO9BQ13459 2157 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 MYOFQ9NZM1 2061 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 hCG_38984A0A1B0GV85 526 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 PRDX2P32119 198 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 CYSLTR1Q9Y271 337 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 LOXL2Q9Y4K0 774 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 IGKV3D-11A0A0A0MRZ8 115 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 MAGEA5P43359 124 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 PMS2CLQ68D20 193 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 PRDM14Q9GZV8 571 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 TSSC4Q9Y5U2 329 aaPredicted RBP4.49□□□□□ -1.69
PTPRD-213ENST00000537002 C12orf77C9JDV5 145 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 NDUFA3O95167 84 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 COX8AP10176 69 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 LGALS3P17931 250 aaKnown RBP4.49□□□□□ -1.69
PTPRD-213ENST00000537002 TNFAIP6P98066 277 aaPredicted RBP4.49□□□□□ -1.69
PTPRD-213ENST00000537002 C8orf46Q8TAG6 207 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 C18orf32Q8TCD1 76 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 NPIPB3Q92617 1050 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 GFRA4Q9GZZ7 299 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 PNRC2Q9NPJ4 139 aaKnown RBP4.49□□□□□ -1.69
PTPRD-213ENST00000537002 SYS1-DBNDD2H3BUS1 97 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 Q6AWC8 147 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 FADS6Q8N9I5 356 aa4.49□□□□□ -1.69
PTPRD-213ENST00000537002 TMEM262E9PQX1 116 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 KLRB1Q12918 225 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 C16orf54Q6UWD8 224 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 NEUROG1Q92886 237 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 LINC00470Q9BZP3 86 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 ONECUT1Q9UBC0 465 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 DOCK11Q5JSL3 2073 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 TRAV5A0A0B4J249 113 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 LEPP41159 167 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 C5orf64Q2M2E5 130 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 NEGR1Q7Z3B1 354 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 ZNF441Q8N8Z8 693 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 NGBQ9NPG2 151 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 FOXH1O75593 365 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 PYYP10082 97 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 PEAR1Q5VY43 1037 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-213ENST00000537002 COLCA1Q6ZS62 124 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 RP1P56715 2156 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms