RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 NNATQ16517 81 aa2.01□□□□□ -2.09
PRKDC-208ENST00000536710 OR6V1Q8N148 313 aa2.01□□□□□ -2.09
PRKDC-208ENST00000536710 LINC00471Q8N535 108 aa2.01□□□□□ -2.09
PRKDC-208ENST00000536710 C9orf163Q8N9P6 203 aa2.01□□□□□ -2.09
PRKDC-208ENST00000536710 TERB2Q8NHR7 220 aa2.01□□□□□ -2.09
PRKDC-208ENST00000536710 KIFC1Q9BW19 673 aa2.01□□□□□ -2.09
PRKDC-208ENST00000536710 ERGIC3Q9Y282 383 aa2.01□□□□□ -2.09
PRKDC-208ENST00000536710 ARL2BPQ9Y2Y0 163 aa2.01□□□□□ -2.09
PRKDC-208ENST00000536710 GBF1Q92538 1859 aa2.01□□□□□ -2.09
PRKDC-208ENST00000536710 CFAP43Q8NDM7 1665 aa2□□□□□ -2.09
PRKDC-208ENST00000536710 HAND1O96004 215 aa2□□□□□ -2.09
PRKDC-208ENST00000536710 S100A4P26447 101 aaKnown RBP2□□□□□ -2.09
PRKDC-208ENST00000536710 ERVS71-1P61550 626 aa2□□□□□ -2.09
PRKDC-208ENST00000536710 Q1T7F1 81 aa2□□□□□ -2.09
PRKDC-208ENST00000536710 KHDC3LQ587J8 217 aa2□□□□□ -2.09
PRKDC-208ENST00000536710 OOSP2Q86WS3 158 aa2□□□□□ -2.09
PRKDC-208ENST00000536710 ZNF439Q8NDP4 499 aa2□□□□□ -2.09
PRKDC-208ENST00000536710 PFN4Q8NHR9 129 aa2□□□□□ -2.09
PRKDC-208ENST00000536710 YIPF3Q9GZM5 350 aa2□□□□□ -2.09
PRKDC-208ENST00000536710 C20orf27Q9GZN8 174 aa2□□□□□ -2.09
PRKDC-208ENST00000536710 TLNRD1Q9H1K6 362 aa2□□□□□ -2.09
PRKDC-208ENST00000536710 IDI2-AS1Q9NZ38 188 aa2□□□□□ -2.09
PRKDC-208ENST00000536710 ABCA8O94911 1581 aa2□□□□□ -2.09
PRKDC-208ENST00000536710 SAMD9Q5K651 1589 aa2□□□□□ -2.09
PRKDC-208ENST00000536710 COL11A1P12107 1806 aaPredicted RBP2□□□□□ -2.09
PRKDC-208ENST00000536710 CCDC144AA2RUR9 1427 aa2□□□□□ -2.09
PRKDC-208ENST00000536710 ROBO3Q96MS0 1386 aa1.99□□□□□ -2.09
PRKDC-208ENST00000536710 ABCA9Q8IUA7 1624 aa1.99□□□□□ -2.09
PRKDC-208ENST00000536710 HECW2Q9P2P5 1572 aa1.99□□□□□ -2.09
PRKDC-208ENST00000536710 IGKV2-29A2NJV5 120 aaPredicted RBP1.99□□□□□ -2.09
PRKDC-208ENST00000536710 TRAPPC13A5PLN9 417 aa1.99□□□□□ -2.09
PRKDC-208ENST00000536710 BUB1B-PAK6H3BSN5 160 aa1.99□□□□□ -2.09
PRKDC-208ENST00000536710 SERPINE1P05121 402 aa1.99□□□□□ -2.09
PRKDC-208ENST00000536710 HTR1AP08908 422 aa1.99□□□□□ -2.09
PRKDC-208ENST00000536710 SMIM17P0DL12 118 aa1.99□□□□□ -2.09
PRKDC-208ENST00000536710 DEFA3P59666 94 aa1.99□□□□□ -2.09
PRKDC-208ENST00000536710 CDC42P60953 191 aa1.99□□□□□ -2.09
PRKDC-208ENST00000536710 C12orf74Q32Q52 190 aa1.99□□□□□ -2.09
PRKDC-208ENST00000536710 LIN52Q52LA3 116 aa1.99□□□□□ -2.09
PRKDC-208ENST00000536710 HIST3H2BBQ8N257 126 aa1.99□□□□□ -2.09
PRKDC-208ENST00000536710 OR4E2Q8NGC2 313 aa1.99□□□□□ -2.09
PRKDC-208ENST00000536710 NMNAT1Q9HAN9 279 aaPredicted RBP1.99□□□□□ -2.09
PRKDC-208ENST00000536710 CYSLTR1Q9Y271 337 aa1.99□□□□□ -2.09
PRKDC-208ENST00000536710 LHFPL6Q9Y693 200 aa1.99□□□□□ -2.09
PRKDC-208ENST00000536710 RICTORQ6R327 1708 aa1.99□□□□□ -2.09
PRKDC-208ENST00000536710 LRRIQ1Q96JM4 1722 aa1.99□□□□□ -2.09
PRKDC-208ENST00000536710 FRMPD1Q5SYB0 1578 aa1.98□□□□□ -2.09
PRKDC-208ENST00000536710 FBN1P35555 2871 aaKnown RBP1.98□□□□□ -2.09
PRKDC-208ENST00000536710 EPRSP07814 1512 aaKnown RBP1.98□□□□□ -2.09
PRKDC-208ENST00000536710 DOCK10Q96BY6 2186 aa1.98□□□□□ -2.09
PRKDC-208ENST00000536710 TMEM212A6NML5 194 aa1.98□□□□□ -2.09
PRKDC-208ENST00000536710 CLPSP04118 112 aa1.98□□□□□ -2.09
PRKDC-208ENST00000536710 CRYGAP11844 174 aa1.98□□□□□ -2.09
PRKDC-208ENST00000536710 OR5A1Q8NGJ0 315 aa1.98□□□□□ -2.09
PRKDC-208ENST00000536710 FAM32AQ9Y421 112 aaKnown RBP1.98□□□□□ -2.09
PRKDC-208ENST00000536710 PRXQ9BXM0 1461 aa1.98□□□□□ -2.09
PRKDC-208ENST00000536710 RAPGEF2Q9Y4G8 1499 aa1.98□□□□□ -2.09
PRKDC-208ENST00000536710 PIK3C2GO75747 1445 aa1.98□□□□□ -2.09
PRKDC-208ENST00000536710 KIF21BO75037 1637 aa1.98□□□□□ -2.09
PRKDC-208ENST00000536710 CUL9Q8IWT3 2517 aa1.97□□□□□ -2.09
PRKDC-208ENST00000536710 MAGI3Q5TCQ9 1506 aa1.97□□□□□ -2.09
PRKDC-208ENST00000536710 WDR7Q9Y4E6 1490 aa1.97□□□□□ -2.09
PRKDC-208ENST00000536710 ITGB4P16144 1822 aa1.97□□□□□ -2.09
PRKDC-208ENST00000536710 A0A0D9SG52 128 aa1.97□□□□□ -2.09
PRKDC-208ENST00000536710 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
PRKDC-208ENST00000536710 OR7C1O76099 320 aaPredicted RBP1.97□□□□□ -2.09
PRKDC-208ENST00000536710 OR5F1O95221 314 aa1.97□□□□□ -2.09
PRKDC-208ENST00000536710 ZNF682O95780 498 aa1.97□□□□□ -2.09
PRKDC-208ENST00000536710 C8GP07360 202 aa1.97□□□□□ -2.09
PRKDC-208ENST00000536710 PPIBP23284 216 aaKnown RBP1.97□□□□□ -2.09
PRKDC-208ENST00000536710 HSD11B1P28845 292 aa1.97□□□□□ -2.09
PRKDC-208ENST00000536710 CASP1P29466 404 aa1.97□□□□□ -2.09
PRKDC-208ENST00000536710 TMED2Q15363 201 aa1.97□□□□□ -2.09
PRKDC-208ENST00000536710 TRAPPC6BQ86SZ2 158 aa1.97□□□□□ -2.09
PRKDC-208ENST00000536710 SIGLECL1Q8N7X8 197 aa1.97□□□□□ -2.09
PRKDC-208ENST00000536710 OR52L1Q8NGH7 329 aa1.97□□□□□ -2.09
PRKDC-208ENST00000536710 SLC25A40Q8TBP6 338 aa1.97□□□□□ -2.09
PRKDC-208ENST00000536710 OSTCQ9NRP0 149 aa1.97□□□□□ -2.09
PRKDC-208ENST00000536710 RAPGEF6Q8TEU7 1601 aa1.97□□□□□ -2.09
PRKDC-208ENST00000536710 NCOA1Q15788 1441 aa1.97□□□□□ -2.09
PRKDC-208ENST00000536710 UACAQ9BZF9 1416 aa1.97□□□□□ -2.09
PRKDC-208ENST00000536710 BCORL1Q5H9F3 1711 aa1.97□□□□□ -2.09
PRKDC-208ENST00000536710 TONSLQ96HA7 1378 aa1.97□□□□□ -2.09
PRKDC-208ENST00000536710 RALGAPA2Q2PPJ7 1873 aa1.97□□□□□ -2.09
PRKDC-208ENST00000536710 SERPINA1P01009 418 aa1.96□□□□□ -2.1
PRKDC-208ENST00000536710 SHBGP04278 402 aa1.96□□□□□ -2.1
PRKDC-208ENST00000536710 SPI1P17947 270 aa1.96□□□□□ -2.1
PRKDC-208ENST00000536710 G6PCP35575 357 aa1.96□□□□□ -2.1
PRKDC-208ENST00000536710 DEFB119Q8N690 84 aa1.96□□□□□ -2.1
PRKDC-208ENST00000536710 OR52R1Q8NGF1 315 aa1.96□□□□□ -2.1
PRKDC-208ENST00000536710 PHB2Q99623 299 aa1.96□□□□□ -2.1
PRKDC-208ENST00000536710 ENY2Q9NPA8 101 aa1.96□□□□□ -2.1
PRKDC-208ENST00000536710 PTPRGP23470 1445 aa1.96□□□□□ -2.1
PRKDC-208ENST00000536710 ZMYM4Q5VZL5 1548 aa1.96□□□□□ -2.1
PRKDC-208ENST00000536710 TEX14Q8IWB6 1497 aa1.95□□□□□ -2.1
PRKDC-208ENST00000536710 TTC37Q6PGP7 1564 aa1.95□□□□□ -2.1
PRKDC-208ENST00000536710 SETD5Q9C0A6 1442 aa1.95□□□□□ -2.1
PRKDC-208ENST00000536710 IGKV1D-42A0A075B6H8 117 aa1.95□□□□□ -2.1
PRKDC-208ENST00000536710 FUOMA2VDF0 154 aa1.95□□□□□ -2.1
PRKDC-208ENST00000536710 C1orf196B1AJZ1 125 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms