RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 AMBPP02760 352 aa9.41□□□□□ -0.9
TNFRSF1A-207ENST00000535958 RBMY1A1P0DJD3 496 aaKnown RBP9.41□□□□□ -0.9
TNFRSF1A-207ENST00000535958 RBMY1CP0DJD4 496 aa9.41□□□□□ -0.9
TNFRSF1A-207ENST00000535958 PGAM2P15259 253 aa9.41□□□□□ -0.9
TNFRSF1A-207ENST00000535958 NAT1P18440 290 aa9.41□□□□□ -0.9
TNFRSF1A-207ENST00000535958 C4BPBP20851 252 aa9.41□□□□□ -0.9
TNFRSF1A-207ENST00000535958 NPY1RP25929 384 aa9.41□□□□□ -0.9
TNFRSF1A-207ENST00000535958 NUTF2P61970 127 aaKnown RBP9.41□□□□□ -0.9
TNFRSF1A-207ENST00000535958 RBMY1FQ15415 496 aaKnown RBP9.41□□□□□ -0.9
TNFRSF1A-207ENST00000535958 LILRB2Q8N423 598 aa9.41□□□□□ -0.9
TNFRSF1A-207ENST00000535958 NDUFAF3Q9BU61 184 aa9.41□□□□□ -0.9
TNFRSF1A-207ENST00000535958 C1QTNF4Q9BXJ3 329 aa9.41□□□□□ -0.9
TNFRSF1A-207ENST00000535958 DEFB131BA0A096LNP1 70 aa9.4□□□□□ -0.9
TNFRSF1A-207ENST00000535958 A0A1B0GU03 582 aa9.4□□□□□ -0.9
TNFRSF1A-207ENST00000535958 PRSS29PA6NIE9 313 aa9.4□□□□□ -0.9
TNFRSF1A-207ENST00000535958 K7EQG2 157 aa9.4□□□□□ -0.9
TNFRSF1A-207ENST00000535958 TMEM50AO95807 157 aa9.4□□□□□ -0.9
TNFRSF1A-207ENST00000535958 DHRS2Q13268 280 aa9.4□□□□□ -0.9
TNFRSF1A-207ENST00000535958 UBE2DNLQ8IWF7 75 aa9.4□□□□□ -0.9
TNFRSF1A-207ENST00000535958 CLEC5AQ9NY25 188 aa9.4□□□□□ -0.9
TNFRSF1A-207ENST00000535958 RPS10-NUDT3A0A1W2PQS6 291 aa9.39□□□□□ -0.91
TNFRSF1A-207ENST00000535958 CLN5O75503 358 aa9.39□□□□□ -0.91
TNFRSF1A-207ENST00000535958 IGKV1-39P01597 117 aa9.39□□□□□ -0.91
TNFRSF1A-207ENST00000535958 IGKV1D-39P04432 117 aa9.39□□□□□ -0.91
TNFRSF1A-207ENST00000535958 MED14OSP0DP75 135 aa9.39□□□□□ -0.91
TNFRSF1A-207ENST00000535958 RCVRNP35243 200 aa9.39□□□□□ -0.91
TNFRSF1A-207ENST00000535958 PPP5CP53041 499 aa9.39□□□□□ -0.91
TNFRSF1A-207ENST00000535958 AP2S1P53680 142 aaPredicted RBP9.39□□□□□ -0.91
TNFRSF1A-207ENST00000535958 SNRPD3P62318 126 aaKnown RBP9.39□□□□□ -0.91
TNFRSF1A-207ENST00000535958 TRIM16LQ309B1 348 aa9.39□□□□□ -0.91
TNFRSF1A-207ENST00000535958 PSMG4Q5JS54 123 aa9.39□□□□□ -0.91
TNFRSF1A-207ENST00000535958 SCPEP1Q9HB40 452 aa9.39□□□□□ -0.91
TNFRSF1A-207ENST00000535958 X6R8D5 127 aa9.39□□□□□ -0.91
TNFRSF1A-207ENST00000535958 PCLOQ9Y6V0 5065 aa9.39□□□□□ -0.91
TNFRSF1A-207ENST00000535958 KIAA1109Q2LD37 5005 aa9.38□□□□□ -0.91
TNFRSF1A-207ENST00000535958 TRAV30A0A087WSZ9 112 aa9.38□□□□□ -0.91
TNFRSF1A-207ENST00000535958 ELOA3CA0A087WX78 387 aaPredicted RBP9.38□□□□□ -0.91
TNFRSF1A-207ENST00000535958 CRYBB3P26998 211 aa9.38□□□□□ -0.91
TNFRSF1A-207ENST00000535958 UCP3P55916 312 aa9.38□□□□□ -0.91
TNFRSF1A-207ENST00000535958 IZUMO4Q1ZYL8 232 aa9.38□□□□□ -0.91
TNFRSF1A-207ENST00000535958 ZNF767PQ75MW2 155 aa9.38□□□□□ -0.91
TNFRSF1A-207ENST00000535958 SNX29P2Q8IUI4 249 aa9.38□□□□□ -0.91
TNFRSF1A-207ENST00000535958 POM121L12Q8N7R1 296 aa9.38□□□□□ -0.91
TNFRSF1A-207ENST00000535958 OR4X1Q8NH49 305 aa9.38□□□□□ -0.91
TNFRSF1A-207ENST00000535958 RRNAD1Q96FB5 475 aaKnown RBP9.38□□□□□ -0.91
TNFRSF1A-207ENST00000535958 ZNF486Q96H40 463 aaPredicted RBP9.38□□□□□ -0.91
TNFRSF1A-207ENST00000535958 INS-IGF2F8WCM5 200 aa9.37□□□□□ -0.91
TNFRSF1A-207ENST00000535958 M0R2N4 97 aa9.37□□□□□ -0.91
TNFRSF1A-207ENST00000535958 IFNA10P01566 189 aa9.37□□□□□ -0.91
TNFRSF1A-207ENST00000535958 IFNA21P01568 189 aa9.37□□□□□ -0.91
TNFRSF1A-207ENST00000535958 HNRNPCP07910 306 aaKnown RBP eCLIP9.37□□□□□ -0.91
TNFRSF1A-207ENST00000535958 GIG44P09565 113 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF1A-207ENST00000535958 RNASE2P10153 161 aaKnown RBP9.37□□□□□ -0.91
TNFRSF1A-207ENST00000535958 LYSMD2Q8IV50 215 aa9.37□□□□□ -0.91
TNFRSF1A-207ENST00000535958 GPX8Q8TED1 209 aa9.37□□□□□ -0.91
TNFRSF1A-207ENST00000535958 DCANP1Q8TF63 244 aa9.37□□□□□ -0.91
TNFRSF1A-207ENST00000535958 Q8WTZ3 238 aa9.37□□□□□ -0.91
TNFRSF1A-207ENST00000535958 VCX3AQ9NNX9 186 aa9.37□□□□□ -0.91
TNFRSF1A-207ENST00000535958 CELA1Q9UNI1 258 aa9.37□□□□□ -0.91
TNFRSF1A-207ENST00000535958 AGRNO00468 2067 aa9.36□□□□□ -0.91
TNFRSF1A-207ENST00000535958 GSTZ1O43708 216 aaPredicted RBP9.36□□□□□ -0.91
TNFRSF1A-207ENST00000535958 TGFBR1P36897 503 aa9.36□□□□□ -0.91
TNFRSF1A-207ENST00000535958 ETV6P41212 452 aa9.36□□□□□ -0.91
TNFRSF1A-207ENST00000535958 PIGPP57054 158 aa9.36□□□□□ -0.91
TNFRSF1A-207ENST00000535958 LSM3P62310 102 aaKnown RBP9.36□□□□□ -0.91
TNFRSF1A-207ENST00000535958 TIGITQ495A1 244 aa9.36□□□□□ -0.91
TNFRSF1A-207ENST00000535958 SOHLH1Q5JUK2 328 aa9.36□□□□□ -0.91
TNFRSF1A-207ENST00000535958 CCDC71LQ8N9Z2 235 aa9.36□□□□□ -0.91
TNFRSF1A-207ENST00000535958 OR1S2Q8NGQ3 325 aa9.36□□□□□ -0.91
TNFRSF1A-207ENST00000535958 COPZ2Q9P299 210 aa9.36□□□□□ -0.91
TNFRSF1A-207ENST00000535958 COMMD3Q9UBI1 195 aa9.36□□□□□ -0.91
TNFRSF1A-207ENST00000535958 A0A0B4J293 547 aa9.35□□□□□ -0.91
TNFRSF1A-207ENST00000535958 C3orf85A0A1B0GTC6 90 aa9.35□□□□□ -0.91
TNFRSF1A-207ENST00000535958 M0QYG6 137 aa9.35□□□□□ -0.91
TNFRSF1A-207ENST00000535958 IGKV1-5P01602 117 aa9.35□□□□□ -0.91
TNFRSF1A-207ENST00000535958 RPS19P39019 145 aaKnown RBP9.35□□□□□ -0.91
TNFRSF1A-207ENST00000535958 RPL5P46777 297 aaKnown RBP9.35□□□□□ -0.91
TNFRSF1A-207ENST00000535958 RND3P61587 244 aa9.35□□□□□ -0.91
TNFRSF1A-207ENST00000535958 C12orf74Q32Q52 190 aa9.35□□□□□ -0.91
TNFRSF1A-207ENST00000535958 RNASE10Q5GAN6 216 aaKnown RBP9.35□□□□□ -0.91
TNFRSF1A-207ENST00000535958 RAB40CQ96S21 281 aa9.35□□□□□ -0.91
TNFRSF1A-207ENST00000535958 XCL2Q9UBD3 114 aa9.35□□□□□ -0.91
TNFRSF1A-207ENST00000535958 TEX48A0A1B0GUV7 120 aa9.34□□□□□ -0.91
TNFRSF1A-207ENST00000535958 A0A1B0GVY2 172 aa9.34□□□□□ -0.91
TNFRSF1A-207ENST00000535958 TMEM189A5PLL7 270 aa9.34□□□□□ -0.91
TNFRSF1A-207ENST00000535958 APOA1P02647 267 aa9.34□□□□□ -0.91
TNFRSF1A-207ENST00000535958 IL4P05112 153 aa9.34□□□□□ -0.91
TNFRSF1A-207ENST00000535958 SPART-AS1P0CW21 52 aa9.34□□□□□ -0.91
TNFRSF1A-207ENST00000535958 SLC25A4P12235 298 aa9.34□□□□□ -0.91
TNFRSF1A-207ENST00000535958 PI3P19957 117 aa9.34□□□□□ -0.91
TNFRSF1A-207ENST00000535958 HTR2BP41595 481 aa9.34□□□□□ -0.91
TNFRSF1A-207ENST00000535958 EMP1P54849 157 aa9.34□□□□□ -0.91
TNFRSF1A-207ENST00000535958 RNASE12Q5GAN4 147 aaKnown RBP9.34□□□□□ -0.91
TNFRSF1A-207ENST00000535958 ETFRF1Q6IPR1 90 aa9.34□□□□□ -0.91
TNFRSF1A-207ENST00000535958 CSNK1G2-AS1Q8NCQ2 148 aa9.34□□□□□ -0.91
TNFRSF1A-207ENST00000535958 TP53RKQ96S44 253 aa9.34□□□□□ -0.91
TNFRSF1A-207ENST00000535958 FNDC4Q9H6D8 234 aaPredicted RBP9.34□□□□□ -0.91
TNFRSF1A-207ENST00000535958 NRN1Q9NPD7 142 aa9.34□□□□□ -0.91
TNFRSF1A-207ENST00000535958 HEYLQ9NQ87 328 aaPredicted RBP9.34□□□□□ -0.91
TNFRSF1A-207ENST00000535958 FAT2Q9NYQ8 4349 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms