RNA–Protein interactions for RNA: ENST00000535954.1

C2CD3-209, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-209ENST00000535954 ZNF124Q15973 351 aa6.55□□□□□ -1.36
C2CD3-209ENST00000535954 ZFAND6Q6FIF0 208 aa6.55□□□□□ -1.36
C2CD3-209ENST00000535954 RBPMS2Q6ZRY4 209 aaKnown RBP6.55□□□□□ -1.36
C2CD3-209ENST00000535954 SLC16A13Q7RTY0 426 aa6.55□□□□□ -1.36
C2CD3-209ENST00000535954 WFDC3Q8IUB2 231 aa6.55□□□□□ -1.36
C2CD3-209ENST00000535954 FAM219AQ8IW50 185 aa6.55□□□□□ -1.36
C2CD3-209ENST00000535954 CCDC71LQ8N9Z2 235 aa6.55□□□□□ -1.36
C2CD3-209ENST00000535954 RBPMSQ93062 196 aaKnown RBP6.55□□□□□ -1.36
C2CD3-209ENST00000535954 TRIM63Q969Q1 353 aa6.55□□□□□ -1.36
C2CD3-209ENST00000535954 PINX1Q96BK5 328 aaKnown RBP6.55□□□□□ -1.36
C2CD3-209ENST00000535954 C20orf24Q9BUV8 137 aa6.55□□□□□ -1.36
C2CD3-209ENST00000535954 VSIRQ9H7M9 311 aa6.55□□□□□ -1.36
C2CD3-209ENST00000535954 UBQLN2Q9UHD9 624 aa6.55□□□□□ -1.36
C2CD3-209ENST00000535954 V9GYH0 126 aa6.55□□□□□ -1.36
C2CD3-209ENST00000535954 LOC102724200A0A096LPH7 203 aaPredicted RBP6.54□□□□□ -1.36
C2CD3-209ENST00000535954 IGHV3-49A0A0A0MS15 119 aa6.54□□□□□ -1.36
C2CD3-209ENST00000535954 TRAV14DV4A0A0A6YYC5 116 aa6.54□□□□□ -1.36
C2CD3-209ENST00000535954 NUPL2O15504 423 aaKnown RBP6.54□□□□□ -1.36
C2CD3-209ENST00000535954 CLN5O75503 358 aa6.54□□□□□ -1.36
C2CD3-209ENST00000535954 NXPH3O95157 252 aa6.54□□□□□ -1.36
C2CD3-209ENST00000535954 IFNA17P01571 189 aa6.54□□□□□ -1.36
C2CD3-209ENST00000535954 IGKV1-17P01599 117 aa6.54□□□□□ -1.36
C2CD3-209ENST00000535954 AKR1C2P52895 323 aa6.54□□□□□ -1.36
C2CD3-209ENST00000535954 SPCS3P61009 180 aa6.54□□□□□ -1.36
C2CD3-209ENST00000535954 EWSR1Q01844 656 aaKnown RBP eCLIP6.54□□□□□ -1.36
C2CD3-209ENST00000535954 TRIM16LQ309B1 348 aa6.54□□□□□ -1.36
C2CD3-209ENST00000535954 ANKRD55Q3KP44 614 aa6.54□□□□□ -1.36
C2CD3-209ENST00000535954 NMSQ5H8A3 153 aa6.54□□□□□ -1.36
C2CD3-209ENST00000535954 TMEM268Q5VZI3 342 aa6.54□□□□□ -1.36
C2CD3-209ENST00000535954 CCDC190Q86UF4 302 aa6.54□□□□□ -1.36
C2CD3-209ENST00000535954 TMEM116Q8NCL8 245 aa6.54□□□□□ -1.36
C2CD3-209ENST00000535954 OR4X1Q8NH49 305 aa6.54□□□□□ -1.36
C2CD3-209ENST00000535954 MCFD2Q8NI22 146 aa6.54□□□□□ -1.36
C2CD3-209ENST00000535954 GGTLC1Q9BX51 225 aa6.54□□□□□ -1.36
C2CD3-209ENST00000535954 C6orf62Q9GZU0 229 aaPredicted RBP6.54□□□□□ -1.36
C2CD3-209ENST00000535954 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.54□□□□□ -1.36
C2CD3-209ENST00000535954 NDUFA13Q9P0J0 144 aa6.54□□□□□ -1.36
C2CD3-209ENST00000535954 RSL24D1Q9UHA3 163 aaKnown RBP6.54□□□□□ -1.36
C2CD3-209ENST00000535954 U3KQE9 123 aa6.54□□□□□ -1.36
C2CD3-209ENST00000535954 IGHV3OR16-13A0A075B7E8 117 aa6.53□□□□□ -1.36
C2CD3-209ENST00000535954 IGHV3-74A0A0B4J1X5 117 aa6.53□□□□□ -1.36
C2CD3-209ENST00000535954 LCE6AA0A183 80 aa6.53□□□□□ -1.36
C2CD3-209ENST00000535954 GNG7O60262 68 aa6.53□□□□□ -1.36
C2CD3-209ENST00000535954 ATG12O94817 140 aa6.53□□□□□ -1.36
C2CD3-209ENST00000535954 SNCAP37840 140 aa6.53□□□□□ -1.36
C2CD3-209ENST00000535954 RELQ04864 619 aaPredicted RBP6.53□□□□□ -1.36
C2CD3-209ENST00000535954 C2orf83Q53S99 150 aa6.53□□□□□ -1.36
C2CD3-209ENST00000535954 LAMTOR1Q6IAA8 161 aa6.53□□□□□ -1.36
C2CD3-209ENST00000535954 ZNF600Q6ZNG1 722 aa6.53□□□□□ -1.36
C2CD3-209ENST00000535954 LYZL2Q7Z4W2 148 aa6.53□□□□□ -1.36
C2CD3-209ENST00000535954 APRG1Q8IVJ8 170 aa6.53□□□□□ -1.36
C2CD3-209ENST00000535954 FAM24BQ8N5W8 94 aa6.53□□□□□ -1.36
C2CD3-209ENST00000535954 SLC35G3Q8N808 338 aa6.53□□□□□ -1.36
C2CD3-209ENST00000535954 DUSP18Q8NEJ0 188 aa6.53□□□□□ -1.36
C2CD3-209ENST00000535954 ST8SIA2Q92186 375 aa6.53□□□□□ -1.36
C2CD3-209ENST00000535954 IL22RA2Q969J5 263 aa6.53□□□□□ -1.36
C2CD3-209ENST00000535954 RRNAD1Q96FB5 475 aaKnown RBP6.53□□□□□ -1.36
C2CD3-209ENST00000535954 PRRT1Q99946 306 aa6.53□□□□□ -1.36
C2CD3-209ENST00000535954 CACNG5Q9UF02 275 aa6.53□□□□□ -1.36
C2CD3-209ENST00000535954 C14orf166Q9Y224 244 aaKnown RBP6.53□□□□□ -1.36
C2CD3-209ENST00000535954 PUS1Q9Y606 427 aaKnown RBP eCLIP6.53□□□□□ -1.36
C2CD3-209ENST00000535954 KMT2AQ03164 3969 aa6.53□□□□□ -1.36
C2CD3-209ENST00000535954 ALMS1Q8TCU4 4167 aa6.53□□□□□ -1.36
C2CD3-209ENST00000535954 PITX3O75364 302 aa6.52□□□□□ -1.37
C2CD3-209ENST00000535954 DFFBO76075 338 aa6.52□□□□□ -1.37
C2CD3-209ENST00000535954 YIF1AO95070 293 aa6.52□□□□□ -1.37
C2CD3-209ENST00000535954 IGLC1P0CG04 106 aa6.52□□□□□ -1.37
C2CD3-209ENST00000535954 CRYBB3P26998 211 aa6.52□□□□□ -1.37
C2CD3-209ENST00000535954 NPBWR1P48145 328 aa6.52□□□□□ -1.37
C2CD3-209ENST00000535954 SUB1P53999 127 aaKnown RBP eCLIP6.52□□□□□ -1.37
C2CD3-209ENST00000535954 PRSS54Q6PEW0 395 aa6.52□□□□□ -1.37
C2CD3-209ENST00000535954 Q6ZWC4 215 aa6.52□□□□□ -1.37
C2CD3-209ENST00000535954 RNF183Q96D59 192 aa6.52□□□□□ -1.37
C2CD3-209ENST00000535954 MAP6D1Q9H9H5 199 aa6.52□□□□□ -1.37
C2CD3-209ENST00000535954 A0A0B4J2A0 478 aa6.51□□□□□ -1.37
C2CD3-209ENST00000535954 KIR2DL5BA0A0G2JN68 375 aa6.51□□□□□ -1.37
C2CD3-209ENST00000535954 KIR2DL5BA0A0G2JPC4 375 aa6.51□□□□□ -1.37
C2CD3-209ENST00000535954 CORTO00230 105 aa6.51□□□□□ -1.37
C2CD3-209ENST00000535954 HTR2BP41595 481 aa6.51□□□□□ -1.37
C2CD3-209ENST00000535954 RBMS2Q15434 407 aaKnown RBP6.51□□□□□ -1.37
C2CD3-209ENST00000535954 TIGITQ495A1 244 aa6.51□□□□□ -1.37
C2CD3-209ENST00000535954 TCF24Q7RTU0 167 aa6.51□□□□□ -1.37
C2CD3-209ENST00000535954 KIR2DL5AQ8N109 375 aa6.51□□□□□ -1.37
C2CD3-209ENST00000535954 GBGT1Q8N5D6 347 aa6.51□□□□□ -1.37
C2CD3-209ENST00000535954 LRTM2Q8N967 370 aa6.51□□□□□ -1.37
C2CD3-209ENST00000535954 KIR2DL5BQ8NHK3 375 aa6.51□□□□□ -1.37
C2CD3-209ENST00000535954 SDHCQ99643 169 aaPredicted RBP6.51□□□□□ -1.37
C2CD3-209ENST00000535954 BATF3Q9NR55 127 aa6.51□□□□□ -1.37
C2CD3-209ENST00000535954 HSPB7Q9UBY9 170 aa6.51□□□□□ -1.37
C2CD3-209ENST00000535954 SHPKQ9UHJ6 478 aa6.51□□□□□ -1.37
C2CD3-209ENST00000535954 SCP2D1Q9UJQ7 156 aa6.51□□□□□ -1.37
C2CD3-209ENST00000535954 TP53TG1Q9Y2A0 90 aa6.51□□□□□ -1.37
C2CD3-209ENST00000535954 IGHV3-66A0A0C4DH42 116 aa6.5□□□□□ -1.37
C2CD3-209ENST00000535954 OR4C46A6NHA9 309 aa6.5□□□□□ -1.37
C2CD3-209ENST00000535954 ZNF701M0R085 212 aaPredicted RBP6.5□□□□□ -1.37
C2CD3-209ENST00000535954 SPRY2O43597 315 aa6.5□□□□□ -1.37
C2CD3-209ENST00000535954 GIG44P09565 113 aaPredicted RBP6.5□□□□□ -1.37
C2CD3-209ENST00000535954 SULT1A3P0DMM9 295 aa6.5□□□□□ -1.37
C2CD3-209ENST00000535954 SULT1A4P0DMN0 295 aa6.5□□□□□ -1.37
C2CD3-209ENST00000535954 AKR1C4P17516 323 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms