RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 HBE1P02100 147 aa6.43□□□□□ -1.38
COL21A1-212ENST00000535941 ZFP36P26651 326 aaKnown RBP6.43□□□□□ -1.38
COL21A1-212ENST00000535941 VAMP3Q15836 100 aa6.43□□□□□ -1.38
COL21A1-212ENST00000535941 TMEM41BQ5BJD5 291 aa6.43□□□□□ -1.38
COL21A1-212ENST00000535941 ZNF506Q5JVG8 444 aa6.43□□□□□ -1.38
COL21A1-212ENST00000535941 RBMXL1Q96E39 390 aaKnown RBP6.43□□□□□ -1.38
COL21A1-212ENST00000535941 C20orf144Q9BQM9 153 aa6.43□□□□□ -1.38
COL21A1-212ENST00000535941 CTDSP1Q9GZU7 261 aa6.43□□□□□ -1.38
COL21A1-212ENST00000535941 CHD8Q9HCK8 2581 aa6.43□□□□□ -1.38
COL21A1-212ENST00000535941 CR1P17927 2039 aa6.43□□□□□ -1.38
COL21A1-212ENST00000535941 TRAV34A0A0B4J273 112 aa6.43□□□□□ -1.38
COL21A1-212ENST00000535941 NDUFA3O95167 84 aa6.43□□□□□ -1.38
COL21A1-212ENST00000535941 IGHV4-39P01824 125 aa6.43□□□□□ -1.38
COL21A1-212ENST00000535941 GALR1P47211 349 aa6.43□□□□□ -1.38
COL21A1-212ENST00000535941 CNN1P51911 297 aaKnown RBP6.43□□□□□ -1.38
COL21A1-212ENST00000535941 FAM3BP58499 235 aaPredicted RBP6.43□□□□□ -1.38
COL21A1-212ENST00000535941 NPBQ8NG41 125 aa6.43□□□□□ -1.38
COL21A1-212ENST00000535941 VN1R17PQ8TDU5 208 aa6.43□□□□□ -1.38
COL21A1-212ENST00000535941 MBD3L1Q8WWY6 194 aa6.43□□□□□ -1.38
COL21A1-212ENST00000535941 RFNGQ9Y644 331 aa6.43□□□□□ -1.38
COL21A1-212ENST00000535941 LIPFP07098 398 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 SAA1P0DJI8 122 aaPredicted RBP6.42□□□□□ -1.38
COL21A1-212ENST00000535941 HOXB4P17483 251 aaPredicted RBP6.42□□□□□ -1.38
COL21A1-212ENST00000535941 PRTN3P24158 256 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 SLAQ13239 276 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 ZNF726P1Q15940 193 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 ABHD12Q8N2K0 398 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 STXBP6Q8NFX7 210 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 RAB1CQ92928 201 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 GNPNAT1Q96EK6 184 aaPredicted RBP6.42□□□□□ -1.38
COL21A1-212ENST00000535941 SSBP3Q9BWW4 388 aaPredicted RBP6.42□□□□□ -1.38
COL21A1-212ENST00000535941 PPIAL4CA0A0B4J2A2 164 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 TEX50A0A1B0GTY4 177 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 LY6HO94772 140 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 HRASP01112 189 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 PPBPP02775 128 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 PPIAL4GP0DN37 164 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 HNRNPA3P51991 378 aaKnown RBP6.42□□□□□ -1.38
COL21A1-212ENST00000535941 TMEM267Q0VDI3 215 aaPredicted RBP6.42□□□□□ -1.38
COL21A1-212ENST00000535941 LTC4SQ16873 150 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 TDRG1Q3Y452 100 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 C2orf83Q53S99 150 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 C16orf82Q7Z2V1 217 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 STPG4Q8N801 248 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 OR1L8Q8NGR8 309 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 OR5B3Q8NH48 314 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 CLEC7AQ9BXN2 247 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 PRNDQ9UKY0 176 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 TCF19Q9Y242 345 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 CSMD2Q7Z408 3487 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 ANKHD1Q8IWZ3 2542 aaKnown RBP6.42□□□□□ -1.38
COL21A1-212ENST00000535941 COL6A6A6NMZ7 2263 aa6.42□□□□□ -1.38
COL21A1-212ENST00000535941 IGHV2-70DA0A0C4DH43 119 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 MAP1LC3B2A6NCE7 125 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 GNG7O60262 68 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 HSPE1P61604 102 aaKnown RBP6.41□□□□□ -1.38
COL21A1-212ENST00000535941 SERF2P84101 59 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 TMEM241Q24JQ0 296 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 Q6ZN92 141 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 RITA1Q96K30 269 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 MAP1LC3BQ9GZQ8 125 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 WDR83OSQ9Y284 106 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 ATRXP46100 2492 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 NCOR2Q9Y618 2525 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 IGHV1-3A0A0C4DH29 117 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 MC5RP33032 325 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 RTL8BQ17RB0 113 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 VKORC1L1Q8N0U8 176 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 TEX45Q8NA69 505 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 OR4C13Q8NGP0 309 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 SMIM7Q9BQ49 75 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 SLC35D1Q9NTN3 355 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 WASHC3Q9Y3C0 194 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 IAPPP10997 89 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 SCGB2A2Q13296 93 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 FBLN7Q53RD9 439 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 CLDND2Q8NHS1 167 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 CMTM2Q8TAZ6 248 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 TMEM147Q9BVK8 224 aa6.41□□□□□ -1.38
COL21A1-212ENST00000535941 CEBPZOSA8MTT3 80 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 OOSP1A8MZH6 123 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 E7EUB6 86 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 NDUFS7O75251 213 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 CST7O76096 145 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 PDLIM4P50479 330 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 TPTE2P1Q5T6R2 138 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 UNQ5815/PRO19632Q6UWF5 114 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 SHISA2Q6UWI4 295 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 TMEM256Q8N2U0 113 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 OR2D3Q8NGH3 330 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 OR10G4Q8NGN3 311 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 C10orf105Q8TEF2 133 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 TAF15Q92804 592 aaKnown RBP eCLIP6.4□□□□□ -1.38
COL21A1-212ENST00000535941 TIMD4Q96H15 378 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 SRSF8Q9BRL6 282 aaKnown RBP6.4□□□□□ -1.38
COL21A1-212ENST00000535941 SAMD10Q9BYL1 202 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 SDF2L1Q9HCN8 221 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 LAMTOR2Q9Y2Q5 125 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 NXPH3O95157 252 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 IGKV1D-33P01593 117 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms