RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 UBE2E2Q96LR5 201 aa10.56□□□□□ -0.72
SPG11-203ENST00000535302 C19orf24Q9BVV8 132 aa10.56□□□□□ -0.72
SPG11-203ENST00000535302 ZNF257Q9Y2Q1 563 aa10.56□□□□□ -0.72
SPG11-203ENST00000535302 POLEQ07864 2286 aa10.56□□□□□ -0.72
SPG11-203ENST00000535302 C19orf67A6NJJ6 358 aa10.56□□□□□ -0.72
SPG11-203ENST00000535302 H7C1H1 209 aa10.56□□□□□ -0.72
SPG11-203ENST00000535302 RPRMQ9NS64 109 aa10.56□□□□□ -0.72
SPG11-203ENST00000535302 SAA2-SAA4A0A096LPE2 208 aa10.56□□□□□ -0.72
SPG11-203ENST00000535302 FAM90A26D6RGX4 464 aa10.56□□□□□ -0.72
SPG11-203ENST00000535302 SAP30O75446 220 aa10.56□□□□□ -0.72
SPG11-203ENST00000535302 VENTXO95231 258 aa10.56□□□□□ -0.72
SPG11-203ENST00000535302 SAA2P0DJI9 122 aaPredicted RBP10.56□□□□□ -0.72
SPG11-203ENST00000535302 IFITM2Q01629 132 aa10.56□□□□□ -0.72
SPG11-203ENST00000535302 DOCK7Q96N67 2140 aa10.56□□□□□ -0.72
SPG11-203ENST00000535302 KBTBD11-OT1A0A1B0GTJ5 212 aa10.55□□□□□ -0.72
SPG11-203ENST00000535302 RAMP3O60896 148 aa10.55□□□□□ -0.72
SPG11-203ENST00000535302 KLRD1Q13241 179 aa10.55□□□□□ -0.72
SPG11-203ENST00000535302 LYZL4Q96KX0 146 aa10.55□□□□□ -0.72
SPG11-203ENST00000535302 A6NNC1 897 aa10.55□□□□□ -0.72
SPG11-203ENST00000535302 CEACAM1P13688 526 aa10.55□□□□□ -0.72
SPG11-203ENST00000535302 NDPQ00604 133 aa10.55□□□□□ -0.72
SPG11-203ENST00000535302 CD300EQ496F6 205 aaPredicted RBP10.55□□□□□ -0.72
SPG11-203ENST00000535302 FGFBP3Q8TAT2 258 aa10.55□□□□□ -0.72
SPG11-203ENST00000535302 PRTN3P24158 256 aa10.55□□□□□ -0.72
SPG11-203ENST00000535302 FOXL1Q12952 345 aa10.55□□□□□ -0.72
SPG11-203ENST00000535302 NIT1Q86X76 327 aa10.55□□□□□ -0.72
SPG11-203ENST00000535302 ST20Q9HBF5 79 aa10.55□□□□□ -0.72
SPG11-203ENST00000535302 TRAV40A0A0B4J280 105 aa10.55□□□□□ -0.72
SPG11-203ENST00000535302 RPP21Q9H633 154 aaKnown RBP10.55□□□□□ -0.72
SPG11-203ENST00000535302 IGKV2-40A0A087WW87 121 aaPredicted RBP10.55□□□□□ -0.72
SPG11-203ENST00000535302 TRAV8-4A0A0B4J246 113 aa10.55□□□□□ -0.72
SPG11-203ENST00000535302 IGKV2D-40P01614 121 aaPredicted RBP10.55□□□□□ -0.72
SPG11-203ENST00000535302 HIST1H2BAQ96A08 127 aa10.55□□□□□ -0.72
SPG11-203ENST00000535302 SEPSECSQ9HD40 501 aaKnown RBP10.55□□□□□ -0.72
SPG11-203ENST00000535302 FOXF2Q12947 444 aa10.55□□□□□ -0.72
SPG11-203ENST00000535302 IGFL4Q6B9Z1 124 aa10.55□□□□□ -0.72
SPG11-203ENST00000535302 RBBP6Q7Z6E9 1792 aaKnown RBP10.54□□□□□ -0.72
SPG11-203ENST00000535302 A0A1B0GUT8 65 aa10.54□□□□□ -0.72
SPG11-203ENST00000535302 CFHR3Q02985 330 aa10.54□□□□□ -0.72
SPG11-203ENST00000535302 PSMG4Q5JS54 123 aa10.54□□□□□ -0.72
SPG11-203ENST00000535302 SCRT1Q9BWW7 348 aa10.54□□□□□ -0.72
SPG11-203ENST00000535302 IL36BQ9NZH7 164 aa10.54□□□□□ -0.72
SPG11-203ENST00000535302 SRSF6Q13247 344 aaKnown RBP10.54□□□□□ -0.72
SPG11-203ENST00000535302 RCC1LQ96I51 464 aaKnown RBP10.54□□□□□ -0.72
SPG11-203ENST00000535302 OR2K2Q8NGT1 345 aa10.54□□□□□ -0.72
SPG11-203ENST00000535302 MRPL32Q9BYC8 188 aaKnown RBP10.54□□□□□ -0.72
SPG11-203ENST00000535302 RPL15P61313 204 aaKnown RBP10.54□□□□□ -0.72
SPG11-203ENST00000535302 C1QL4Q86Z23 238 aa10.54□□□□□ -0.72
SPG11-203ENST00000535302 C1QTNF5Q9BXJ0 243 aa10.53□□□□□ -0.72
SPG11-203ENST00000535302 LAMTOR3Q9UHA4 124 aa10.53□□□□□ -0.72
SPG11-203ENST00000535302 C17orf100A8MU93 164 aa10.53□□□□□ -0.72
SPG11-203ENST00000535302 IGKV1D-13A0A0B4J2D9 117 aa10.53□□□□□ -0.72
SPG11-203ENST00000535302 IGKV1-13P0DP09 117 aa10.53□□□□□ -0.72
SPG11-203ENST00000535302 OR10W1Q8NGF6 305 aa10.53□□□□□ -0.72
SPG11-203ENST00000535302 TMEM249Q2WGJ8 235 aa10.53□□□□□ -0.72
SPG11-203ENST00000535302 C8orf46Q8TAG6 207 aa10.53□□□□□ -0.72
SPG11-203ENST00000535302 GTF3AQ92664 365 aaKnown RBP10.53□□□□□ -0.72
SPG11-203ENST00000535302 IMMP1LQ96LU5 166 aa10.53□□□□□ -0.72
SPG11-203ENST00000535302 NCR2O95944 276 aa10.53□□□□□ -0.72
SPG11-203ENST00000535302 IFI27P40305 119 aaPredicted RBP10.53□□□□□ -0.72
SPG11-203ENST00000535302 FOXG1P55316 489 aaPredicted RBP10.53□□□□□ -0.72
SPG11-203ENST00000535302 PAPPA-AS1Q5QFB9 102 aa10.53□□□□□ -0.72
SPG11-203ENST00000535302 SLC25A2Q9BXI2 301 aa10.53□□□□□ -0.72
SPG11-203ENST00000535302 PEMTQ9UBM1 199 aa10.53□□□□□ -0.72
SPG11-203ENST00000535302 NPIPB13A6NJU9 1138 aa10.53□□□□□ -0.72
SPG11-203ENST00000535302 NPIPB5A8MRT5 1133 aa10.53□□□□□ -0.72
SPG11-203ENST00000535302 RNF182Q8N6D2 247 aa10.53□□□□□ -0.72
SPG11-203ENST00000535302 UCP3P55916 312 aa10.52□□□□□ -0.72
SPG11-203ENST00000535302 MAPK1IP1LQ8NDC0 245 aa10.52□□□□□ -0.72
SPG11-203ENST00000535302 ANAPC13Q9BS18 74 aa10.52□□□□□ -0.72
SPG11-203ENST00000535302 CHTOPQ9Y3Y2 248 aaKnown RBP10.52□□□□□ -0.72
SPG11-203ENST00000535302 SCN4AP35499 1836 aa10.52□□□□□ -0.72
SPG11-203ENST00000535302 CSRP3P50461 194 aa10.52□□□□□ -0.72
SPG11-203ENST00000535302 SAMD13Q5VXD3 122 aa10.52□□□□□ -0.72
SPG11-203ENST00000535302 SUMO4Q6EEV6 95 aa10.52□□□□□ -0.72
SPG11-203ENST00000535302 LINC00477Q96M19 166 aa10.52□□□□□ -0.72
SPG11-203ENST00000535302 MRPL14Q6P1L8 145 aaKnown RBP10.52□□□□□ -0.73
SPG11-203ENST00000535302 TRAV5A0A0B4J249 113 aa10.52□□□□□ -0.73
SPG11-203ENST00000535302 TRAV14DV4A0A0A6YYC5 116 aa10.52□□□□□ -0.73
SPG11-203ENST00000535302 NHLRC3Q5JS37 347 aa10.52□□□□□ -0.73
SPG11-203ENST00000535302 MCRIP2Q9BUT9 160 aaKnown RBP10.52□□□□□ -0.73
SPG11-203ENST00000535302 IGHV1-18A0A0C4DH31 117 aa10.52□□□□□ -0.73
SPG11-203ENST00000535302 C1QTNF9P0C862 333 aa10.52□□□□□ -0.73
SPG11-203ENST00000535302 ALPK2Q86TB3 2170 aa10.52□□□□□ -0.73
SPG11-203ENST00000535302 PAX4O43316 350 aa10.51□□□□□ -0.73
SPG11-203ENST00000535302 LURAP1LQ8IV03 231 aa10.51□□□□□ -0.73
SPG11-203ENST00000535302 SPACA3Q8IXA5 215 aa10.51□□□□□ -0.73
SPG11-203ENST00000535302 A0A0G2JLM5 398 aa10.51□□□□□ -0.73
SPG11-203ENST00000535302 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.51□□□□□ -0.73
SPG11-203ENST00000535302 HOXA3O43365 443 aaPredicted RBP10.51□□□□□ -0.73
SPG11-203ENST00000535302 STAG3L3P0CL85 134 aa10.51□□□□□ -0.73
SPG11-203ENST00000535302 RHOGP84095 191 aa10.51□□□□□ -0.73
SPG11-203ENST00000535302 C5orf24Q7Z6I8 188 aa10.51□□□□□ -0.73
SPG11-203ENST00000535302 KIAA2026Q5HYC2 2103 aa10.51□□□□□ -0.73
SPG11-203ENST00000535302 ORMDL3Q8N138 153 aa10.51□□□□□ -0.73
SPG11-203ENST00000535302 NEU4Q8WWR8 484 aaPredicted RBP10.51□□□□□ -0.73
SPG11-203ENST00000535302 FMC1Q96HJ9 113 aa10.51□□□□□ -0.73
SPG11-203ENST00000535302 JPT2Q9H910 190 aa10.51□□□□□ -0.73
SPG11-203ENST00000535302 PLXNA1Q9UIW2 1896 aa10.51□□□□□ -0.73
SPG11-203ENST00000535302 SMDT1Q9H4I9 107 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms