RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 RPL12P30050 165 aaKnown RBP6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 HOXD3P31249 432 aaPredicted RBP6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 MYCNOSP40205 109 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 HTD2P86397 168 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 UNC119Q13432 240 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 MMDQ15546 238 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 ACOT6Q3I5F7 207 aaPredicted RBP6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 CXorf66Q5JRM2 361 aaPredicted RBP6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 ZNF506Q5JVG8 444 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 GFI1BQ5VTD9 330 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 DMRTA1Q5VZB9 504 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 TEX38Q6PEX7 206 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 LCNL1Q6ZST4 164 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 KCTD9Q7L273 389 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 SSX7Q7RTT5 188 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 ZNF695Q8IW36 515 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 KCNG3Q8TAE7 436 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 IL1F10Q8WWZ1 152 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 DPF1Q92782 380 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 GALMQ96C23 342 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 DUX3Q96PT4 197 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 YPEL2Q96QA6 119 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 TM2D1Q9BX74 207 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 MRPL20Q9BYC9 149 aaKnown RBP6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 PLA2G2EQ9NZK7 142 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 RAB22AQ9UL26 194 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 NOTCH3Q9UM47 2321 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 TGP01266 2768 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 SAA2-SAA4A0A096LPE2 208 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 A0A0A6YYD4 124 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 TRAV1-1A0A0B4J248 108 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 RBFOX3A6NFN3 312 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 TMEM14DPA8MWL7 114 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 E5RGE8 158 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 K7EIL1 84 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 DEDDO75618 318 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 DIRAS3O95661 229 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 IFNA6P05013 189 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 SRP19P09132 144 aaKnown RBP6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 SAA2P0DJI9 122 aaPredicted RBP6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 FCGR2CP31995 323 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 KRTAP10-11P60412 298 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 HLA-DRB3P79483 266 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 QRFPP83859 136 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 ZNF833PQ6ZTB9 187 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 ZNF429Q86V71 674 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 ODF3L1Q8IXM7 274 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 MRGPRFQ96AM1 343 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 NABP2Q9BQ15 211 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 MCRIP2Q9BUT9 160 aaKnown RBP6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 C20orf24Q9BUV8 137 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 LPAR5Q9H1C0 372 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 PLEKHJ1Q9NW61 149 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 FBXL17Q9UF56 701 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 GPR132Q9UNW8 380 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 NSG2Q9Y328 171 aa6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 PUS1Q9Y606 427 aaKnown RBP eCLIP6.7□□□□□ -1.34
SFSWAP-202ENST00000535202 WI2-2373I1.2A0A1W2PRP0 233 aa6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 C20orf202A1L168 122 aa6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 CCL24O00175 119 aa6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 SOCS1O15524 211 aa6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 TOMM40O96008 361 aa6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 NAPSAO96009 420 aa6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 ELANEP08246 267 aa6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 CNTFRP26992 372 aa6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 CFHR3Q02985 330 aa6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 FOXE3Q13461 319 aa6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 PMS2P11Q13670 270 aa6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 DEFB136Q30KP8 78 aa6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 ZNF260Q3ZCT1 412 aa6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 DEFB121Q5J5C9 76 aa6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 OR8G2PQ6IF36 304 aa6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 ZNF880Q6PDB4 577 aa6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 MOB1BQ7L9L4 216 aa6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 CASTOR1Q8WTX7 329 aa6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 TMEM170AQ8WVE7 144 aa6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 RAX2Q96IS3 184 aa6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 RITA1Q96K30 269 aa6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 P2RX4Q99571 388 aa6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 HDHD3Q9BSH5 251 aaPredicted RBP6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 IFI27L2Q9H2X8 130 aa6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 LYRM2Q9NU23 88 aaPredicted RBP6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 AK3Q9UIJ7 227 aa6.69□□□□□ -1.34
SFSWAP-202ENST00000535202 TGIF2-C20orf24A0A0A6YYL0 155 aa6.68□□□□□ -1.34
SFSWAP-202ENST00000535202 A0A1B0GU03 582 aa6.68□□□□□ -1.34
SFSWAP-202ENST00000535202 ZNF705GA8MUZ8 300 aaPredicted RBP6.68□□□□□ -1.34
SFSWAP-202ENST00000535202 ATP6V0E1O15342 81 aa6.68□□□□□ -1.34
SFSWAP-202ENST00000535202 NBR2O15453 112 aa6.68□□□□□ -1.34
SFSWAP-202ENST00000535202 MBPP02686 304 aaPredicted RBP6.68□□□□□ -1.34
SFSWAP-202ENST00000535202 GSTP1P09211 210 aaKnown RBP6.68□□□□□ -1.34
SFSWAP-202ENST00000535202 FAM3BP58499 235 aaPredicted RBP6.68□□□□□ -1.34
SFSWAP-202ENST00000535202 ZNF616Q08AN1 781 aa6.68□□□□□ -1.34
SFSWAP-202ENST00000535202 EGFEM1PQ0D2K5 195 aa6.68□□□□□ -1.34
SFSWAP-202ENST00000535202 RAB32Q13637 225 aa6.68□□□□□ -1.34
SFSWAP-202ENST00000535202 ATP6V1FQ16864 119 aa6.68□□□□□ -1.34
SFSWAP-202ENST00000535202 RPL39P5Q59GN2 51 aa6.68□□□□□ -1.34
SFSWAP-202ENST00000535202 FAM71F2Q6NXP2 309 aa6.68□□□□□ -1.34
SFSWAP-202ENST00000535202 OR4X1Q8NH49 305 aa6.68□□□□□ -1.34
SFSWAP-202ENST00000535202 ABHD14BQ96IU4 210 aa6.68□□□□□ -1.34
SFSWAP-202ENST00000535202 PARP12Q9H0J9 701 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms