RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 ATG12O94817 140 aa7.4□□□□□ -1.22
CLSTN3-203ENST00000534830 APOHP02749 345 aaPredicted RBP7.4□□□□□ -1.22
CLSTN3-203ENST00000534830 CD5P06127 495 aa7.4□□□□□ -1.22
CLSTN3-203ENST00000534830 NPBWR1P48145 328 aa7.4□□□□□ -1.22
CLSTN3-203ENST00000534830 AKR1C2P52895 323 aa7.4□□□□□ -1.22
CLSTN3-203ENST00000534830 CMC4P56277 68 aaPredicted RBP7.4□□□□□ -1.22
CLSTN3-203ENST00000534830 ZNF124Q15973 351 aa7.4□□□□□ -1.22
CLSTN3-203ENST00000534830 MLANAQ16655 118 aa7.4□□□□□ -1.22
CLSTN3-203ENST00000534830 DEFB135Q30KP9 77 aa7.4□□□□□ -1.22
CLSTN3-203ENST00000534830 ZNF600Q6ZNG1 722 aa7.4□□□□□ -1.22
CLSTN3-203ENST00000534830 GPR141Q7Z602 305 aa7.4□□□□□ -1.22
CLSTN3-203ENST00000534830 APRG1Q8IVJ8 170 aa7.4□□□□□ -1.22
CLSTN3-203ENST00000534830 FAM219AQ8IW50 185 aa7.4□□□□□ -1.22
CLSTN3-203ENST00000534830 OR52E5Q8NH55 327 aa7.4□□□□□ -1.22
CLSTN3-203ENST00000534830 SMIM4Q8WVI0 70 aa7.4□□□□□ -1.22
CLSTN3-203ENST00000534830 ST8SIA2Q92186 375 aa7.4□□□□□ -1.22
CLSTN3-203ENST00000534830 KRTAP4-5Q9BYR2 181 aa7.4□□□□□ -1.22
CLSTN3-203ENST00000534830 TMEM222Q9H0R3 208 aa7.4□□□□□ -1.22
CLSTN3-203ENST00000534830 MRPL36Q9P0J6 103 aaKnown RBP7.4□□□□□ -1.22
CLSTN3-203ENST00000534830 IGHV3-49A0A0A0MS15 119 aa7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 TEX13DA0A0J9YY54 714 aaPredicted RBP7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 A0A1B0GU03 582 aa7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 CLN5O75503 358 aa7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 YIF1AO95070 293 aa7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 IFNA17P01571 189 aa7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 OR5AC1P0C628 307 aa7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 SNCAP37840 140 aa7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 ETV6P41212 452 aa7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 SUB1P53999 127 aaKnown RBP eCLIP7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 SPCS3P61009 180 aa7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 MEF2DQ14814 521 aa7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 SURF2Q15527 256 aaPredicted RBP7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 TRIM16LQ309B1 348 aa7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 SCGB2B2Q4G0G5 96 aa7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 FAAP20Q6NZ36 180 aa7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 LYG2Q86SG7 212 aa7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 SELENOHQ8IZQ5 122 aaKnown RBP7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 STPG3Q8N7X2 389 aa7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 SLC35G3Q8N808 338 aa7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 OR4X1Q8NH49 305 aa7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 DYNC2LI1Q8TCX1 351 aa7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 SOSTQ9BQB4 213 aa7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 GINS3Q9BRX5 216 aa7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 RABL2AQ9UBK7 228 aaPredicted RBP7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 RABL2BQ9UNT1 228 aa7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 PUS1Q9Y606 427 aaKnown RBP eCLIP7.39□□□□□ -1.23
CLSTN3-203ENST00000534830 DNAH6Q9C0G6 4158 aa7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 IGHV3OR16-13A0A075B7E8 117 aa7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 IGHV3-74A0A0B4J1X5 117 aa7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 TRAV2A0A0B4J234 112 aa7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 CRYM-AS1A6NIL9 109 aa7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 RGS5O15539 181 aa7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 GSTZ1O43708 216 aaPredicted RBP7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 IGKV1-17P01599 117 aa7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 AKAIN1P0CW23 69 aa7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 RPL35AP18077 110 aaKnown RBP7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 CRYBB3P26998 211 aa7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 TMBIM6P55061 237 aa7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 DHODHQ02127 395 aa7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 TCF24Q7RTU0 167 aa7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 OR4C16Q8NGL9 310 aa7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 RBPMSQ93062 196 aaKnown RBP7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 GPR146Q96CH1 333 aa7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 RRNAD1Q96FB5 475 aaKnown RBP7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 BCL7BQ9BQE9 202 aa7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 PDCD10Q9BUL8 212 aa7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 CSTL1Q9H114 145 aa7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 MS4A6AQ9H2W1 248 aa7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 NAA60Q9H7X0 242 aa7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 CCDC59Q9P031 241 aaKnown RBP7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 TMEM56-RWDD3S4R434 201 aa7.38□□□□□ -1.23
CLSTN3-203ENST00000534830 ANKRD20A5PA0PJZ0 165 aa7.37□□□□□ -1.23
CLSTN3-203ENST00000534830 DISC1C4P0D8 188 aa7.37□□□□□ -1.23
CLSTN3-203ENST00000534830 DFFBO76075 338 aa7.37□□□□□ -1.23
CLSTN3-203ENST00000534830 HOXA1P49639 335 aaPredicted RBP7.37□□□□□ -1.23
CLSTN3-203ENST00000534830 PAFAH1B2P68402 229 aa7.37□□□□□ -1.23
CLSTN3-203ENST00000534830 C2orf83Q53S99 150 aa7.37□□□□□ -1.23
CLSTN3-203ENST00000534830 CLVS1Q8IUQ0 354 aaPredicted RBP7.37□□□□□ -1.23
CLSTN3-203ENST00000534830 GBGT1Q8N5D6 347 aa7.37□□□□□ -1.23
CLSTN3-203ENST00000534830 RAB2BQ8WUD1 216 aa7.37□□□□□ -1.23
CLSTN3-203ENST00000534830 TMEM170AQ8WVE7 144 aa7.37□□□□□ -1.23
CLSTN3-203ENST00000534830 TMEM230Q96A57 120 aa7.37□□□□□ -1.23
CLSTN3-203ENST00000534830 DIRAS2Q96HU8 199 aa7.37□□□□□ -1.23
CLSTN3-203ENST00000534830 PLA2G2EQ9NZK7 142 aa7.37□□□□□ -1.23
CLSTN3-203ENST00000534830 C14orf166Q9Y224 244 aaKnown RBP7.37□□□□□ -1.23
CLSTN3-203ENST00000534830 U3KQE9 123 aa7.37□□□□□ -1.23
CLSTN3-203ENST00000534830 IGKV3-7A0A075B6H7 116 aa7.36□□□□□ -1.23
CLSTN3-203ENST00000534830 NPPCP23582 126 aa7.36□□□□□ -1.23
CLSTN3-203ENST00000534830 OPRK1P41145 380 aa7.36□□□□□ -1.23
CLSTN3-203ENST00000534830 HTR2BP41595 481 aa7.36□□□□□ -1.23
CLSTN3-203ENST00000534830 TFPI2P48307 235 aa7.36□□□□□ -1.23
CLSTN3-203ENST00000534830 PRR20EP86478 221 aa7.36□□□□□ -1.23
CLSTN3-203ENST00000534830 PRR20CP86479 221 aa7.36□□□□□ -1.23
CLSTN3-203ENST00000534830 PRR20DP86480 221 aa7.36□□□□□ -1.23
CLSTN3-203ENST00000534830 PRR20BP86481 221 aa7.36□□□□□ -1.23
CLSTN3-203ENST00000534830 PRR20AP86496 221 aa7.36□□□□□ -1.23
CLSTN3-203ENST00000534830 IL18Q14116 193 aa7.36□□□□□ -1.23
CLSTN3-203ENST00000534830 TMEM187Q14656 261 aa7.36□□□□□ -1.23
CLSTN3-203ENST00000534830 FAM24BQ8N5W8 94 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms