RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 TMEM61Q8N0U2 210 aa9.4□□□□□ -0.9
USF1-211ENST00000534633 RNASE11Q8TAA1 199 aaKnown RBP9.4□□□□□ -0.9
USF1-211ENST00000534633 CCDC140Q96MF4 163 aa9.4□□□□□ -0.9
USF1-211ENST00000534633 A0A1B0GU03 582 aa9.39□□□□□ -0.91
USF1-211ENST00000534633 DUXBA0A1W2PPF3 345 aa9.39□□□□□ -0.91
USF1-211ENST00000534633 TMEM213A2RRL7 107 aa9.39□□□□□ -0.91
USF1-211ENST00000534633 F8W735 103 aaPredicted RBP9.39□□□□□ -0.91
USF1-211ENST00000534633 K7EIM0 57 aa9.39□□□□□ -0.91
USF1-211ENST00000534633 NXPH3O95157 252 aa9.39□□□□□ -0.91
USF1-211ENST00000534633 HOXB5P09067 269 aa9.39□□□□□ -0.91
USF1-211ENST00000534633 H2AFB2P0C5Z0 115 aa9.39□□□□□ -0.91
USF1-211ENST00000534633 HIST1H1BP16401 226 aaKnown RBP9.39□□□□□ -0.91
USF1-211ENST00000534633 SMCO1Q147U7 214 aa9.39□□□□□ -0.91
USF1-211ENST00000534633 BSXQ3C1V8 233 aa9.39□□□□□ -0.91
USF1-211ENST00000534633 C4orf46Q504U0 113 aa9.39□□□□□ -0.91
USF1-211ENST00000534633 GGNBP1Q5YKI7 109 aa9.39□□□□□ -0.91
USF1-211ENST00000534633 SLC25A24Q6NUK1 477 aa9.39□□□□□ -0.91
USF1-211ENST00000534633 MZT2BQ6NZ67 158 aa9.39□□□□□ -0.91
USF1-211ENST00000534633 ZNF114Q8NC26 417 aa9.39□□□□□ -0.91
USF1-211ENST00000534633 OR1P1Q8NH06 330 aa9.39□□□□□ -0.91
USF1-211ENST00000534633 MITD1Q8WV92 249 aa9.39□□□□□ -0.91
USF1-211ENST00000534633 TMEM170AQ8WVE7 144 aa9.39□□□□□ -0.91
USF1-211ENST00000534633 CACNG8Q8WXS5 425 aa9.39□□□□□ -0.91
USF1-211ENST00000534633 EEF1AKMT3Q96AZ1 226 aa9.39□□□□□ -0.91
USF1-211ENST00000534633 SEC22CQ9BRL7 303 aa9.39□□□□□ -0.91
USF1-211ENST00000534633 HSPB7Q9UBY9 170 aa9.39□□□□□ -0.91
USF1-211ENST00000534633 TMED3Q9Y3Q3 217 aa9.39□□□□□ -0.91
USF1-211ENST00000534633 ALMS1Q8TCU4 4167 aa9.38□□□□□ -0.91
USF1-211ENST00000534633 HYDINQ4G0P3 5121 aa9.38□□□□□ -0.91
USF1-211ENST00000534633 TRBV7-1A0A0A6YYK4 115 aa9.38□□□□□ -0.91
USF1-211ENST00000534633 ZNF320A2RRD8 509 aa9.38□□□□□ -0.91
USF1-211ENST00000534633 I3L2K1 104 aa9.38□□□□□ -0.91
USF1-211ENST00000534633 RNASE2P10153 161 aaKnown RBP9.38□□□□□ -0.91
USF1-211ENST00000534633 UXS1Q8NBZ7 420 aa9.38□□□□□ -0.91
USF1-211ENST00000534633 ZNF502Q8TBZ5 544 aa9.38□□□□□ -0.91
USF1-211ENST00000534633 ZNF414Q96IQ9 312 aa9.38□□□□□ -0.91
USF1-211ENST00000534633 GGTLC1Q9BX51 225 aa9.38□□□□□ -0.91
USF1-211ENST00000534633 MLXQ9UH92 298 aa9.38□□□□□ -0.91
USF1-211ENST00000534633 LOC102724200A0A096LPH7 203 aaPredicted RBP9.37□□□□□ -0.91
USF1-211ENST00000534633 IGHV3-21A0A0B4J1V1 117 aa9.37□□□□□ -0.91
USF1-211ENST00000534633 TRAV25A0A0B4J276 109 aa9.37□□□□□ -0.91
USF1-211ENST00000534633 CLEC3BP05452 202 aa9.37□□□□□ -0.91
USF1-211ENST00000534633 SLC25A6P12236 298 aa9.37□□□□□ -0.91
USF1-211ENST00000534633 ERHP84090 104 aaKnown RBP9.37□□□□□ -0.91
USF1-211ENST00000534633 TNFRSF9Q07011 255 aa9.37□□□□□ -0.91
USF1-211ENST00000534633 MLANAQ16655 118 aa9.37□□□□□ -0.91
USF1-211ENST00000534633 VN1R17PQ8TDU5 208 aa9.37□□□□□ -0.91
USF1-211ENST00000534633 SCARB1Q8WTV0 552 aa9.37□□□□□ -0.91
USF1-211ENST00000534633 OR10C1Q96KK4 312 aa9.37□□□□□ -0.91
USF1-211ENST00000534633 CXorf58Q96LI9 332 aa9.37□□□□□ -0.91
USF1-211ENST00000534633 OVOL2Q9BRP0 275 aa9.37□□□□□ -0.91
USF1-211ENST00000534633 RBKSQ9H477 322 aa9.37□□□□□ -0.91
USF1-211ENST00000534633 SCAF4O95104 1147 aaKnown RBP9.36□□□□□ -0.91
USF1-211ENST00000534633 IGHV3-48P01763 117 aa9.36□□□□□ -0.91
USF1-211ENST00000534633 IL5P05113 134 aa9.36□□□□□ -0.91
USF1-211ENST00000534633 C8orf88P0DMB2 117 aa9.36□□□□□ -0.91
USF1-211ENST00000534633 BTNL8Q6UX41 500 aa9.36□□□□□ -0.91
USF1-211ENST00000534633 OR1L6Q8NGR2 347 aa9.36□□□□□ -0.91
USF1-211ENST00000534633 COQ8AQ8NI60 647 aa9.36□□□□□ -0.91
USF1-211ENST00000534633 ENKURQ8TC29 256 aa9.36□□□□□ -0.91
USF1-211ENST00000534633 ZNF431Q8TF32 576 aaPredicted RBP9.36□□□□□ -0.91
USF1-211ENST00000534633 LINC00476Q8WZB0 136 aa9.36□□□□□ -0.91
USF1-211ENST00000534633 MARC2Q969Z3 335 aa9.36□□□□□ -0.91
USF1-211ENST00000534633 MARVELD1Q9BSK0 173 aa9.36□□□□□ -0.91
USF1-211ENST00000534633 PDCD10Q9BUL8 212 aa9.36□□□□□ -0.91
USF1-211ENST00000534633 FNDC4Q9H6D8 234 aaPredicted RBP9.36□□□□□ -0.91
USF1-211ENST00000534633 SELENOKQ9Y6D0 94 aa9.36□□□□□ -0.91
USF1-211ENST00000534633 CEBPZOSA8MTT3 80 aa9.35□□□□□ -0.91
USF1-211ENST00000534633 SNCAP37840 140 aa9.35□□□□□ -0.91
USF1-211ENST00000534633 HOXA1P49639 335 aaPredicted RBP9.35□□□□□ -0.91
USF1-211ENST00000534633 ELLP55199 621 aaPredicted RBP9.35□□□□□ -0.91
USF1-211ENST00000534633 ID3Q02535 119 aa9.35□□□□□ -0.91
USF1-211ENST00000534633 TM4SF20Q53R12 229 aa9.35□□□□□ -0.91
USF1-211ENST00000534633 RBPMS2Q6ZRY4 209 aaKnown RBP9.35□□□□□ -0.91
USF1-211ENST00000534633 OR4D5Q8NGN0 318 aa9.35□□□□□ -0.91
USF1-211ENST00000534633 OR1S1Q8NH92 325 aa9.35□□□□□ -0.91
USF1-211ENST00000534633 HEYLQ9NQ87 328 aaPredicted RBP9.35□□□□□ -0.91
USF1-211ENST00000534633 THYN1Q9P016 225 aa9.35□□□□□ -0.91
USF1-211ENST00000534633 MRPL36Q9P0J6 103 aaKnown RBP9.35□□□□□ -0.91
USF1-211ENST00000534633 MRPL27Q9P0M9 148 aaKnown RBP9.35□□□□□ -0.91
USF1-211ENST00000534633 TP53TG1Q9Y2A0 90 aa9.35□□□□□ -0.91
USF1-211ENST00000534633 PIGBOS1A0A0B4J2F0 54 aa9.34□□□□□ -0.91
USF1-211ENST00000534633 INMT-MINDY4F8WBC2 141 aa9.34□□□□□ -0.91
USF1-211ENST00000534633 MT-CO2P00403 227 aa9.34□□□□□ -0.91
USF1-211ENST00000534633 CTSGP08311 255 aa9.34□□□□□ -0.91
USF1-211ENST00000534633 GPR183P32249 361 aa9.34□□□□□ -0.91
USF1-211ENST00000534633 ADMP35318 185 aa9.34□□□□□ -0.91
USF1-211ENST00000534633 C2orf83Q53S99 150 aa9.34□□□□□ -0.91
USF1-211ENST00000534633 UNQ9165/PRO28630Q6UXU0 137 aa9.34□□□□□ -0.91
USF1-211ENST00000534633 WFDC3Q8IUB2 231 aa9.34□□□□□ -0.91
USF1-211ENST00000534633 C12orf45Q8N5I9 185 aaPredicted RBP9.34□□□□□ -0.91
USF1-211ENST00000534633 DTD1Q8TEA8 209 aa9.34□□□□□ -0.91
USF1-211ENST00000534633 MISP3Q96FF7 219 aa9.34□□□□□ -0.91
USF1-211ENST00000534633 CHRDL1Q9BU40 450 aa9.34□□□□□ -0.91
USF1-211ENST00000534633 MAGT1Q9H0U3 335 aa9.34□□□□□ -0.91
USF1-211ENST00000534633 UFC1Q9Y3C8 167 aa9.34□□□□□ -0.91
USF1-211ENST00000534633 CXorf65A6NEN9 183 aa9.33□□□□□ -0.92
USF1-211ENST00000534633 NUPR2A6NF83 97 aa9.33□□□□□ -0.92
USF1-211ENST00000534633 FAM90A26D6RGX4 464 aa9.33□□□□□ -0.92
USF1-211ENST00000534633 CCSO14618 274 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms