RNA–Protein interactions for RNA: ENST00000534462.1

SCYL1-215, Transcript of SCY1 like pseudokinase 1, human

TSL 3

Gene SCYL1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCYL1-215	ENST00000534462	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.76	□□□□□ -0.21
SCYL1-215	ENST00000534462	MRPL36	Q9P0J6	103 aa	Known RBP	13.76	□□□□□ -0.21
SCYL1-215	ENST00000534462	SHPK	Q9UHJ6	478 aa		13.76	□□□□□ -0.21
SCYL1-215	ENST00000534462	OPRK1	P41145	380 aa		13.75	□□□□□ -0.21
SCYL1-215	ENST00000534462	HTR2B	P41595	481 aa		13.75	□□□□□ -0.21
SCYL1-215	ENST00000534462	BAK1	Q16611	211 aa		13.75	□□□□□ -0.21
SCYL1-215	ENST00000534462	LINC00322	Q6ZN03	302 aa	Predicted RBP	13.75	□□□□□ -0.21
SCYL1-215	ENST00000534462	LGI3	Q8N145	548 aa		13.75	□□□□□ -0.21
SCYL1-215	ENST00000534462	OR10C1	Q96KK4	312 aa		13.75	□□□□□ -0.21
SCYL1-215	ENST00000534462	SLC25A21	Q9BQT8	299 aa	Predicted RBP	13.75	□□□□□ -0.21
SCYL1-215	ENST00000534462	SRD5A3	Q9H8P0	318 aa		13.75	□□□□□ -0.21
SCYL1-215	ENST00000534462	IGHV3-49	A0A0A0MS15	119 aa		13.74	□□□□□ -0.21
SCYL1-215	ENST00000534462	TMEM50A	O95807	157 aa		13.74	□□□□□ -0.21
SCYL1-215	ENST00000534462	SRPX	P78539	464 aa		13.74	□□□□□ -0.21
SCYL1-215	ENST00000534462	TMEM128	Q5BJH2	165 aa		13.74	□□□□□ -0.21
SCYL1-215	ENST00000534462	SMPX	Q9UHP9	88 aa		13.74	□□□□□ -0.21
SCYL1-215	ENST00000534462	KMT2C	Q8NEZ4	4911 aa	Known RBP	13.74	□□□□□ -0.21
SCYL1-215	ENST00000534462	IGHV7-4-1	A0A0J9YVY3	117 aa		13.73	□□□□□ -0.21
SCYL1-215	ENST00000534462	RBMY1B	A6NDE4	496 aa	Known RBP	13.73	□□□□□ -0.21
SCYL1-215	ENST00000534462	RBMY1E	A6NEQ0	496 aa	Known RBP	13.73	□□□□□ -0.21
SCYL1-215	ENST00000534462	RBMY1D	P0C7P1	496 aa	Known RBP	13.73	□□□□□ -0.21
SCYL1-215	ENST00000534462	VAMP1	P23763	118 aa		13.73	□□□□□ -0.21
SCYL1-215	ENST00000534462	INPP1	P49441	399 aa		13.73	□□□□□ -0.21
SCYL1-215	ENST00000534462	CCR6	P51684	374 aa		13.73	□□□□□ -0.21
SCYL1-215	ENST00000534462	SMCO1	Q147U7	214 aa		13.73	□□□□□ -0.21
SCYL1-215	ENST00000534462	ANKRD55	Q3KP44	614 aa		13.73	□□□□□ -0.21
SCYL1-215	ENST00000534462	TRIQK	Q629K1	86 aa		13.73	□□□□□ -0.21
SCYL1-215	ENST00000534462	TOMM20L	Q6UXN7	152 aa		13.73	□□□□□ -0.21
SCYL1-215	ENST00000534462	SLC24A4	Q8NFF2	622 aa		13.73	□□□□□ -0.21
SCYL1-215	ENST00000534462	TMEM170A	Q8WVE7	144 aa		13.73	□□□□□ -0.21
SCYL1-215	ENST00000534462	SDHC	Q99643	169 aa	Predicted RBP	13.73	□□□□□ -0.21
SCYL1-215	ENST00000534462	SPAG8	Q99932	426 aa	Predicted RBP	13.73	□□□□□ -0.21
SCYL1-215	ENST00000534462	NDUFA13	Q9P0J0	144 aa		13.73	□□□□□ -0.21
SCYL1-215	ENST00000534462	IGHV3OR16-13	A0A075B7E8	117 aa		13.72	□□□□□ -0.21
SCYL1-215	ENST00000534462	IGHV3-74	A0A0B4J1X5	117 aa		13.72	□□□□□ -0.21
SCYL1-215	ENST00000534462	CHEK1	O14757	476 aa		13.72	□□□□□ -0.21
SCYL1-215	ENST00000534462	TSPAN4	O14817	238 aa		13.72	□□□□□ -0.21
SCYL1-215	ENST00000534462	TNFRSF9	Q07011	255 aa		13.72	□□□□□ -0.21
SCYL1-215	ENST00000534462	PPP1R1A	Q13522	171 aa		13.72	□□□□□ -0.21
SCYL1-215	ENST00000534462	C2orf83	Q53S99	150 aa		13.72	□□□□□ -0.21
SCYL1-215	ENST00000534462	LAMTOR1	Q6IAA8	161 aa		13.72	□□□□□ -0.21
SCYL1-215	ENST00000534462	TMEM116	Q8NCL8	245 aa		13.72	□□□□□ -0.21
SCYL1-215	ENST00000534462	RNF2	Q99496	336 aa		13.72	□□□□□ -0.21
SCYL1-215	ENST00000534462	SPATA25	Q9BR10	227 aa		13.72	□□□□□ -0.21
SCYL1-215	ENST00000534462	RHPN1-AS1	Q9BWJ2	59 aa		13.72	□□□□□ -0.21
SCYL1-215	ENST00000534462	HSPB7	Q9UBY9	170 aa		13.72	□□□□□ -0.21
SCYL1-215	ENST00000534462	TRAV14DV4	A0A0A6YYC5	116 aa		13.71	□□□□□ -0.21
SCYL1-215	ENST00000534462		A0A1B0GU03	582 aa		13.71	□□□□□ -0.21
SCYL1-215	ENST00000534462	LINC00854	A0A1B0GVQ3	168 aa		13.71	□□□□□ -0.21
SCYL1-215	ENST00000534462	CLN5	O75503	358 aa		13.71	□□□□□ -0.21
SCYL1-215	ENST00000534462	RBMS2	Q15434	407 aa	Known RBP	13.71	□□□□□ -0.21
SCYL1-215	ENST00000534462	ZNF600	Q6ZNG1	722 aa		13.71	□□□□□ -0.21
SCYL1-215	ENST00000534462	CENPS	Q8N2Z9	138 aa		13.71	□□□□□ -0.21
SCYL1-215	ENST00000534462	OR4X1	Q8NH49	305 aa		13.71	□□□□□ -0.21
SCYL1-215	ENST00000534462	HIPK2	Q9H2X6	1198 aa		13.71	□□□□□ -0.21
SCYL1-215	ENST00000534462	RBKS	Q9H477	322 aa		13.71	□□□□□ -0.21
SCYL1-215	ENST00000534462	ZFAND3	Q9H8U3	227 aa		13.71	□□□□□ -0.21
SCYL1-215	ENST00000534462	CACFD1	Q9UGQ2	172 aa		13.71	□□□□□ -0.21
SCYL1-215	ENST00000534462	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
SCYL1-215	ENST00000534462	SFT2D2	O95562	160 aa		13.7	□□□□□ -0.22
SCYL1-215	ENST00000534462	NPY1R	P25929	384 aa		13.7	□□□□□ -0.22
SCYL1-215	ENST00000534462	LRTM2	Q8N967	370 aa		13.7	□□□□□ -0.22
SCYL1-215	ENST00000534462	OR1S1	Q8NH92	325 aa		13.7	□□□□□ -0.22
SCYL1-215	ENST00000534462	GINS3	Q9BRX5	216 aa		13.7	□□□□□ -0.22
SCYL1-215	ENST00000534462	RETN	Q9HD89	108 aa		13.7	□□□□□ -0.22
SCYL1-215	ENST00000534462	DUXB	A0A1W2PPF3	345 aa		13.69	□□□□□ -0.22
SCYL1-215	ENST00000534462	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.69	□□□□□ -0.22
SCYL1-215	ENST00000534462	NAP1L6	A6NFF2	107 aa		13.69	□□□□□ -0.22
SCYL1-215	ENST00000534462	TIGIT	Q495A1	244 aa		13.69	□□□□□ -0.22
SCYL1-215	ENST00000534462	PRSS54	Q6PEW0	395 aa		13.69	□□□□□ -0.22
SCYL1-215	ENST00000534462	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.69	□□□□□ -0.22
SCYL1-215	ENST00000534462	DTD1	Q8TEA8	209 aa		13.69	□□□□□ -0.22
SCYL1-215	ENST00000534462	CITED4	Q96RK1	184 aa		13.69	□□□□□ -0.22
SCYL1-215	ENST00000534462	UBQLN2	Q9UHD9	624 aa		13.69	□□□□□ -0.22
SCYL1-215	ENST00000534462	PIGBOS1	A0A0B4J2F0	54 aa		13.68	□□□□□ -0.22
SCYL1-215	ENST00000534462	NDUFB6	O95139	128 aa		13.68	□□□□□ -0.22
SCYL1-215	ENST00000534462	IFNA10	P01566	189 aa		13.68	□□□□□ -0.22
SCYL1-215	ENST00000534462	IGKV1-17	P01599	117 aa		13.68	□□□□□ -0.22
SCYL1-215	ENST00000534462	APOH	P02749	345 aa	Predicted RBP	13.68	□□□□□ -0.22
SCYL1-215	ENST00000534462	IL7	P13232	177 aa		13.68	□□□□□ -0.22
SCYL1-215	ENST00000534462	RND2	P52198	227 aa		13.68	□□□□□ -0.22
SCYL1-215	ENST00000534462	FLVCR2	Q9UPI3	526 aa		13.68	□□□□□ -0.22
SCYL1-215	ENST00000534462	IGHV3-66	A0A0C4DH42	116 aa		13.67	□□□□□ -0.22
SCYL1-215	ENST00000534462	OR4C46	A6NHA9	309 aa		13.67	□□□□□ -0.22
SCYL1-215	ENST00000534462	PITX3	O75364	302 aa		13.67	□□□□□ -0.22
SCYL1-215	ENST00000534462	SLC25A4	P12235	298 aa		13.67	□□□□□ -0.22
SCYL1-215	ENST00000534462	BTC	P35070	178 aa		13.67	□□□□□ -0.22
SCYL1-215	ENST00000534462	ODF3L2	Q3SX64	289 aa		13.67	□□□□□ -0.22
SCYL1-215	ENST00000534462	ST8SIA2	Q92186	375 aa		13.67	□□□□□ -0.22
SCYL1-215	ENST00000534462	FAM110A	Q9BQ89	295 aa		13.67	□□□□□ -0.22
SCYL1-215	ENST00000534462	IGKV3-7	A0A075B6H7	116 aa		13.66	□□□□□ -0.22
SCYL1-215	ENST00000534462	TRAV30	A0A087WSZ9	112 aa		13.66	□□□□□ -0.22
SCYL1-215	ENST00000534462	SCGB2A1	O75556	95 aa		13.66	□□□□□ -0.22
SCYL1-215	ENST00000534462	HOXB5	P09067	269 aa		13.66	□□□□□ -0.22
SCYL1-215	ENST00000534462	IGLC1	P0CG04	106 aa		13.66	□□□□□ -0.22
SCYL1-215	ENST00000534462	TFPI2	P48307	235 aa		13.66	□□□□□ -0.22
SCYL1-215	ENST00000534462	UBE2M	P61081	183 aa	Known RBP	13.66	□□□□□ -0.22
SCYL1-215	ENST00000534462	FAM90A2P	Q658T7	463 aa		13.66	□□□□□ -0.22
SCYL1-215	ENST00000534462	NOXA1	Q86UR1	476 aa		13.66	□□□□□ -0.22
SCYL1-215	ENST00000534462	LILRB2	Q8N423	598 aa		13.66	□□□□□ -0.22

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