RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 TMEM56-RWDD3S4R434 201 aa10.45□□□□□ -0.74
SF3B2-215ENST00000534307 FABP12A6NFH5 140 aa10.44□□□□□ -0.74
SF3B2-215ENST00000534307 CORTO00230 105 aa10.44□□□□□ -0.74
SF3B2-215ENST00000534307 HOXA1P49639 335 aaPredicted RBP10.44□□□□□ -0.74
SF3B2-215ENST00000534307 SPCS3P61009 180 aa10.44□□□□□ -0.74
SF3B2-215ENST00000534307 DHODHQ02127 395 aa10.44□□□□□ -0.74
SF3B2-215ENST00000534307 LAMTOR1Q6IAA8 161 aa10.44□□□□□ -0.74
SF3B2-215ENST00000534307 TOMM20LQ6UXN7 152 aa10.44□□□□□ -0.74
SF3B2-215ENST00000534307 TMEM116Q8NCL8 245 aa10.44□□□□□ -0.74
SF3B2-215ENST00000534307 TRIM63Q969Q1 353 aa10.44□□□□□ -0.74
SF3B2-215ENST00000534307 GALNT14Q96FL9 552 aa10.44□□□□□ -0.74
SF3B2-215ENST00000534307 PDCD10Q9BUL8 212 aa10.44□□□□□ -0.74
SF3B2-215ENST00000534307 RHPN1-AS1Q9BWJ2 59 aa10.44□□□□□ -0.74
SF3B2-215ENST00000534307 ZFAND3Q9H8U3 227 aa10.44□□□□□ -0.74
SF3B2-215ENST00000534307 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.44□□□□□ -0.74
SF3B2-215ENST00000534307 MRPL36Q9P0J6 103 aaKnown RBP10.44□□□□□ -0.74
SF3B2-215ENST00000534307 HECTD4Q9Y4D8 3996 aa10.43□□□□□ -0.74
SF3B2-215ENST00000534307 LOC102724200A0A096LPH7 203 aaPredicted RBP10.43□□□□□ -0.74
SF3B2-215ENST00000534307 YIF1AO95070 293 aa10.43□□□□□ -0.74
SF3B2-215ENST00000534307 TMEM50AO95807 157 aa10.43□□□□□ -0.74
SF3B2-215ENST00000534307 S100A5P33763 92 aa10.43□□□□□ -0.74
SF3B2-215ENST00000534307 NPBWR1P48145 328 aa10.43□□□□□ -0.74
SF3B2-215ENST00000534307 SUB1P53999 127 aaKnown RBP eCLIP10.43□□□□□ -0.74
SF3B2-215ENST00000534307 TMEM268Q5VZI3 342 aa10.43□□□□□ -0.74
SF3B2-215ENST00000534307 FAM90A2PQ658T7 463 aa10.43□□□□□ -0.74
SF3B2-215ENST00000534307 CCDC190Q86UF4 302 aa10.43□□□□□ -0.74
SF3B2-215ENST00000534307 DUSP18Q8NEJ0 188 aa10.43□□□□□ -0.74
SF3B2-215ENST00000534307 RNASE11Q8TAA1 199 aaKnown RBP10.43□□□□□ -0.74
SF3B2-215ENST00000534307 GPR146Q96CH1 333 aa10.43□□□□□ -0.74
SF3B2-215ENST00000534307 OVOL2Q9BRP0 275 aa10.43□□□□□ -0.74
SF3B2-215ENST00000534307 CACNG5Q9UF02 275 aa10.43□□□□□ -0.74
SF3B2-215ENST00000534307 UBQLN2Q9UHD9 624 aa10.43□□□□□ -0.74
SF3B2-215ENST00000534307 IGHV3-49A0A0A0MS15 119 aa10.42□□□□□ -0.74
SF3B2-215ENST00000534307 TRAV14DV4A0A0A6YYC5 116 aa10.42□□□□□ -0.74
SF3B2-215ENST00000534307 A0A1B0GU03 582 aa10.42□□□□□ -0.74
SF3B2-215ENST00000534307 OR4C46A6NHA9 309 aa10.42□□□□□ -0.74
SF3B2-215ENST00000534307 SUPT4H1P63272 117 aaKnown RBP10.42□□□□□ -0.74
SF3B2-215ENST00000534307 KLF9Q13886 244 aaPredicted RBP10.42□□□□□ -0.74
SF3B2-215ENST00000534307 TMEM187Q14656 261 aa10.42□□□□□ -0.74
SF3B2-215ENST00000534307 ZNF600Q6ZNG1 722 aa10.42□□□□□ -0.74
SF3B2-215ENST00000534307 OR4X1Q8NH49 305 aa10.42□□□□□ -0.74
SF3B2-215ENST00000534307 TMEM170AQ8WVE7 144 aa10.42□□□□□ -0.74
SF3B2-215ENST00000534307 IL22RA2Q969J5 263 aa10.42□□□□□ -0.74
SF3B2-215ENST00000534307 VSIRQ9H7M9 311 aa10.42□□□□□ -0.74
SF3B2-215ENST00000534307 SCP2D1Q9UJQ7 156 aa10.42□□□□□ -0.74
SF3B2-215ENST00000534307 PUS1Q9Y606 427 aaKnown RBP eCLIP10.42□□□□□ -0.74
SF3B2-215ENST00000534307 CLN5O75503 358 aa10.41□□□□□ -0.74
SF3B2-215ENST00000534307 HTR2BP41595 481 aa10.41□□□□□ -0.74
SF3B2-215ENST00000534307 MLANAQ16655 118 aa10.41□□□□□ -0.74
SF3B2-215ENST00000534307 NMSQ5H8A3 153 aa10.41□□□□□ -0.74
SF3B2-215ENST00000534307 LILRB2Q8N423 598 aa10.41□□□□□ -0.74
SF3B2-215ENST00000534307 GINS3Q9BRX5 216 aa10.41□□□□□ -0.74
SF3B2-215ENST00000534307 ENY2Q9NPA8 101 aa10.41□□□□□ -0.74
SF3B2-215ENST00000534307 MCUBQ9NWR8 336 aa10.41□□□□□ -0.74
SF3B2-215ENST00000534307 PRR13Q9NZ81 148 aa10.41□□□□□ -0.74
SF3B2-215ENST00000534307 IGHV3OR16-13A0A075B7E8 117 aa10.4□□□□□ -0.74
SF3B2-215ENST00000534307 IGHV3-74A0A0B4J1X5 117 aa10.4□□□□□ -0.74
SF3B2-215ENST00000534307 IGKV1-17P01599 117 aa10.4□□□□□ -0.74
SF3B2-215ENST00000534307 APOHP02749 345 aaPredicted RBP10.4□□□□□ -0.74
SF3B2-215ENST00000534307 OPRK1P41145 380 aa10.4□□□□□ -0.74
SF3B2-215ENST00000534307 C2orf83Q53S99 150 aa10.4□□□□□ -0.74
SF3B2-215ENST00000534307 ST8SIA2Q92186 375 aa10.4□□□□□ -0.74
SF3B2-215ENST00000534307 SCGB3A2Q96PL1 93 aa10.4□□□□□ -0.74
SF3B2-215ENST00000534307 KCNIP3Q9Y2W7 256 aa10.4□□□□□ -0.74
SF3B2-215ENST00000534307 KMT2AQ03164 3969 aa10.4□□□□□ -0.75
SF3B2-215ENST00000534307 A0A0B4J2A0 478 aa10.39□□□□□ -0.75
SF3B2-215ENST00000534307 KIR2DL5BA0A0G2JN68 375 aa10.39□□□□□ -0.75
SF3B2-215ENST00000534307 KIR2DL5BA0A0G2JPC4 375 aa10.39□□□□□ -0.75
SF3B2-215ENST00000534307 Q6ZWC4 215 aa10.39□□□□□ -0.75
SF3B2-215ENST00000534307 WFDC3Q8IUB2 231 aa10.39□□□□□ -0.75
SF3B2-215ENST00000534307 KIR2DL5AQ8N109 375 aa10.39□□□□□ -0.75
SF3B2-215ENST00000534307 KIR2DL5BQ8NHK3 375 aa10.39□□□□□ -0.75
SF3B2-215ENST00000534307 SDHCQ99643 169 aaPredicted RBP10.39□□□□□ -0.75
SF3B2-215ENST00000534307 SRRQ9GZT4 340 aa10.39□□□□□ -0.75
SF3B2-215ENST00000534307 SHPKQ9UHJ6 478 aa10.39□□□□□ -0.75
SF3B2-215ENST00000534307 TP53TG1Q9Y2A0 90 aa10.39□□□□□ -0.75
SF3B2-215ENST00000534307 CD5P06127 495 aa10.38□□□□□ -0.75
SF3B2-215ENST00000534307 SULT1A3P0DMM9 295 aa10.38□□□□□ -0.75
SF3B2-215ENST00000534307 SULT1A4P0DMN0 295 aa10.38□□□□□ -0.75
SF3B2-215ENST00000534307 AKR1C4P17516 323 aa10.38□□□□□ -0.75
SF3B2-215ENST00000534307 APOC4P55056 127 aa10.38□□□□□ -0.75
SF3B2-215ENST00000534307 PRSS54Q6PEW0 395 aa10.38□□□□□ -0.75
SF3B2-215ENST00000534307 TCF24Q7RTU0 167 aa10.38□□□□□ -0.75
SF3B2-215ENST00000534307 LYZL2Q7Z4W2 148 aa10.38□□□□□ -0.75
SF3B2-215ENST00000534307 APRG1Q8IVJ8 170 aa10.38□□□□□ -0.75
SF3B2-215ENST00000534307 SLC24A4Q8NFF2 622 aa10.38□□□□□ -0.75
SF3B2-215ENST00000534307 RNASEH2CQ8TDP1 164 aaKnown RBP10.38□□□□□ -0.75
SF3B2-215ENST00000534307 HEYLQ9NQ87 328 aaPredicted RBP10.38□□□□□ -0.75
SF3B2-215ENST00000534307 HSPB7Q9UBY9 170 aa10.38□□□□□ -0.75
SF3B2-215ENST00000534307 CACFD1Q9UGQ2 172 aa10.38□□□□□ -0.75
SF3B2-215ENST00000534307 RPS10-NUDT3A0A1W2PQS6 291 aa10.37□□□□□ -0.75
SF3B2-215ENST00000534307 CEBPZOSA8MTT3 80 aa10.37□□□□□ -0.75
SF3B2-215ENST00000534307 UBE2CO00762 179 aa10.37□□□□□ -0.75
SF3B2-215ENST00000534307 DFFBO76075 338 aa10.37□□□□□ -0.75
SF3B2-215ENST00000534307 IGLC1P0CG04 106 aa10.37□□□□□ -0.75
SF3B2-215ENST00000534307 CRYBB3P26998 211 aa10.37□□□□□ -0.75
SF3B2-215ENST00000534307 BMI1P35226 326 aa10.37□□□□□ -0.75
SF3B2-215ENST00000534307 FAUP35544 74 aaKnown RBP10.37□□□□□ -0.75
SF3B2-215ENST00000534307 CCR6P51684 374 aa10.37□□□□□ -0.75
SF3B2-215ENST00000534307 AP3S2P59780 193 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms