RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 FAM240BA0A1B0GVZ2 78 aa10.12□□□□□ -0.79
CMTM1-219ENST00000533953 DUXBA0A1W2PPF3 345 aa10.12□□□□□ -0.79
CMTM1-219ENST00000533953 GNG7O60262 68 aa10.12□□□□□ -0.79
CMTM1-219ENST00000533953 YIF1AO95070 293 aa10.12□□□□□ -0.79
CMTM1-219ENST00000533953 TMEM50AO95807 157 aa10.12□□□□□ -0.79
CMTM1-219ENST00000533953 H2AFB2P0C5Z0 115 aa10.12□□□□□ -0.79
CMTM1-219ENST00000533953 HTR2BP41595 481 aa10.12□□□□□ -0.79
CMTM1-219ENST00000533953 ASAH1Q13510 395 aa10.12□□□□□ -0.79
CMTM1-219ENST00000533953 C2orf83Q53S99 150 aa10.12□□□□□ -0.79
CMTM1-219ENST00000533953 DUSP18Q8NEJ0 188 aa10.12□□□□□ -0.79
CMTM1-219ENST00000533953 COQ8AQ8NI60 647 aa10.12□□□□□ -0.79
CMTM1-219ENST00000533953 DYNLRB2Q8TF09 96 aa10.12□□□□□ -0.79
CMTM1-219ENST00000533953 WDR89Q96FK6 387 aaPredicted RBP10.12□□□□□ -0.79
CMTM1-219ENST00000533953 HIPK2Q9H2X6 1198 aa10.12□□□□□ -0.79
CMTM1-219ENST00000533953 SIGLEC8Q9NYZ4 499 aa10.12□□□□□ -0.79
CMTM1-219ENST00000533953 ZMAT5Q9UDW3 170 aaKnown RBP10.12□□□□□ -0.79
CMTM1-219ENST00000533953 ZNF785A8K8V0 405 aa10.11□□□□□ -0.79
CMTM1-219ENST00000533953 WRBO00258 174 aa10.11□□□□□ -0.79
CMTM1-219ENST00000533953 CCSO14618 274 aa10.11□□□□□ -0.79
CMTM1-219ENST00000533953 NUPL2O15504 423 aaKnown RBP10.11□□□□□ -0.79
CMTM1-219ENST00000533953 NPY1RP25929 384 aa10.11□□□□□ -0.79
CMTM1-219ENST00000533953 SPSB3Q6PJ21 355 aa10.11□□□□□ -0.79
CMTM1-219ENST00000533953 BTNL8Q6UX41 500 aa10.11□□□□□ -0.79
CMTM1-219ENST00000533953 Q8N1Y9 231 aa10.11□□□□□ -0.79
CMTM1-219ENST00000533953 TMEM190Q8WZ59 177 aa10.11□□□□□ -0.79
CMTM1-219ENST00000533953 OR10C1Q96KK4 312 aa10.11□□□□□ -0.79
CMTM1-219ENST00000533953 TXN2Q99757 166 aa10.11□□□□□ -0.79
CMTM1-219ENST00000533953 ASCL2Q99929 193 aa10.11□□□□□ -0.79
CMTM1-219ENST00000533953 PAIP2BQ9ULR5 123 aaKnown RBP10.11□□□□□ -0.79
CMTM1-219ENST00000533953 IGHV3OR16-13A0A075B7E8 117 aa10.1□□□□□ -0.79
CMTM1-219ENST00000533953 IGHV3-74A0A0B4J1X5 117 aa10.1□□□□□ -0.79
CMTM1-219ENST00000533953 A8MWP6 167 aa10.1□□□□□ -0.79
CMTM1-219ENST00000533953 NDUFA4O00483 81 aa10.1□□□□□ -0.79
CMTM1-219ENST00000533953 SLC25A6P12236 298 aa10.1□□□□□ -0.79
CMTM1-219ENST00000533953 FCGR2BP31994 310 aaPredicted RBP10.1□□□□□ -0.79
CMTM1-219ENST00000533953 NPBWR1P48145 328 aa10.1□□□□□ -0.79
CMTM1-219ENST00000533953 GUCA2BQ16661 112 aa10.1□□□□□ -0.79
CMTM1-219ENST00000533953 TIGITQ495A1 244 aa10.1□□□□□ -0.79
CMTM1-219ENST00000533953 MZT2BQ6NZ67 158 aa10.1□□□□□ -0.79
CMTM1-219ENST00000533953 PRSS54Q6PEW0 395 aa10.1□□□□□ -0.79
CMTM1-219ENST00000533953 MITD1Q8WV92 249 aa10.1□□□□□ -0.79
CMTM1-219ENST00000533953 UFC1Q9Y3C8 167 aa10.1□□□□□ -0.79
CMTM1-219ENST00000533953 SORL1Q92673 2214 aa10.09□□□□□ -0.79
CMTM1-219ENST00000533953 C15orf62A8K5M9 175 aa10.09□□□□□ -0.79
CMTM1-219ENST00000533953 SCAF4O95104 1147 aaKnown RBP10.09□□□□□ -0.79
CMTM1-219ENST00000533953 IFNA21P01568 189 aa10.09□□□□□ -0.79
CMTM1-219ENST00000533953 IFNA4P05014 189 aa10.09□□□□□ -0.79
CMTM1-219ENST00000533953 C8orf88P0DMB2 117 aa10.09□□□□□ -0.79
CMTM1-219ENST00000533953 RND2P52198 227 aa10.09□□□□□ -0.79
CMTM1-219ENST00000533953 POLR2GP62487 172 aaKnown RBP eCLIP10.09□□□□□ -0.79
CMTM1-219ENST00000533953 TOMM20LQ6UXN7 152 aa10.09□□□□□ -0.79
CMTM1-219ENST00000533953 NRARPQ7Z6K4 114 aa10.09□□□□□ -0.79
CMTM1-219ENST00000533953 TMEM61Q8N0U2 210 aa10.09□□□□□ -0.79
CMTM1-219ENST00000533953 OR4D5Q8NGN0 318 aa10.09□□□□□ -0.79
CMTM1-219ENST00000533953 OR4X1Q8NH49 305 aa10.09□□□□□ -0.79
CMTM1-219ENST00000533953 NPIPB3Q92617 1050 aa10.09□□□□□ -0.79
CMTM1-219ENST00000533953 ACY3Q96HD9 319 aa10.09□□□□□ -0.79
CMTM1-219ENST00000533953 PALMDQ9NP74 551 aa10.09□□□□□ -0.79
CMTM1-219ENST00000533953 GSKIPQ9P0R6 139 aa10.09□□□□□ -0.79
CMTM1-219ENST00000533953 IGHV3-66A0A0C4DH42 116 aa10.08□□□□□ -0.8
CMTM1-219ENST00000533953 H3BP45 60 aa10.08□□□□□ -0.8
CMTM1-219ENST00000533953 CORTO00230 105 aa10.08□□□□□ -0.8
CMTM1-219ENST00000533953 SYNGR2O43760 224 aa10.08□□□□□ -0.8
CMTM1-219ENST00000533953 CLN5O75503 358 aa10.08□□□□□ -0.8
CMTM1-219ENST00000533953 IGKV1-17P01599 117 aa10.08□□□□□ -0.8
CMTM1-219ENST00000533953 APOHP02749 345 aaPredicted RBP10.08□□□□□ -0.8
CMTM1-219ENST00000533953 CD7P09564 240 aa10.08□□□□□ -0.8
CMTM1-219ENST00000533953 ID3Q02535 119 aa10.08□□□□□ -0.8
CMTM1-219ENST00000533953 IAH1Q2TAA2 248 aaPredicted RBP10.08□□□□□ -0.8
CMTM1-219ENST00000533953 LCN12Q6JVE5 192 aa10.08□□□□□ -0.8
CMTM1-219ENST00000533953 ENKURQ8TC29 256 aa10.08□□□□□ -0.8
CMTM1-219ENST00000533953 RNASEH2CQ8TDP1 164 aaKnown RBP10.08□□□□□ -0.8
CMTM1-219ENST00000533953 ZNF431Q8TF32 576 aaPredicted RBP10.08□□□□□ -0.8
CMTM1-219ENST00000533953 ATP6V0BQ99437 205 aa10.08□□□□□ -0.8
CMTM1-219ENST00000533953 GAR1Q9NY12 217 aaKnown RBP10.08□□□□□ -0.8
CMTM1-219ENST00000533953 PUS1Q9Y606 427 aaKnown RBP eCLIP10.08□□□□□ -0.8
CMTM1-219ENST00000533953 U3KQ87 197 aa10.08□□□□□ -0.8
CMTM1-219ENST00000533953 PIGBOS1A0A0B4J2F0 54 aa10.07□□□□□ -0.8
CMTM1-219ENST00000533953 FAM25EA8MYX2 175 aa10.07□□□□□ -0.8
CMTM1-219ENST00000533953 SCGB1D2O95969 90 aa10.07□□□□□ -0.8
CMTM1-219ENST00000533953 ELLP55199 621 aaPredicted RBP10.07□□□□□ -0.8
CMTM1-219ENST00000533953 RELQ04864 619 aaPredicted RBP10.07□□□□□ -0.8
CMTM1-219ENST00000533953 SPANXN5Q5MJ07 72 aa10.07□□□□□ -0.8
CMTM1-219ENST00000533953 SLC16A13Q7RTY0 426 aa10.07□□□□□ -0.8
CMTM1-219ENST00000533953 LILRB2Q8N423 598 aa10.07□□□□□ -0.8
CMTM1-219ENST00000533953 C12orf45Q8N5I9 185 aaPredicted RBP10.07□□□□□ -0.8
CMTM1-219ENST00000533953 ZBTB8BQ8NAP8 495 aaPredicted RBP10.07□□□□□ -0.8
CMTM1-219ENST00000533953 WFDC10AQ9H1F0 79 aa10.07□□□□□ -0.8
CMTM1-219ENST00000533953 DAZ1Q9NQZ3 744 aaKnown RBP10.07□□□□□ -0.8
CMTM1-219ENST00000533953 TECRQ9NZ01 308 aaKnown RBP10.07□□□□□ -0.8
CMTM1-219ENST00000533953 MRPL27Q9P0M9 148 aaKnown RBP10.07□□□□□ -0.8
CMTM1-219ENST00000533953 CACFD1Q9UGQ2 172 aa10.07□□□□□ -0.8
CMTM1-219ENST00000533953 SMPXQ9UHP9 88 aa10.07□□□□□ -0.8
CMTM1-219ENST00000533953 SMAD5-AS1Q9Y6J3 95 aa10.07□□□□□ -0.8
CMTM1-219ENST00000533953 RPS10-NUDT3A0A1W2PQS6 291 aa10.06□□□□□ -0.8
CMTM1-219ENST00000533953 FAM90A26D6RGX4 464 aa10.06□□□□□ -0.8
CMTM1-219ENST00000533953 K7EMT4 169 aa10.06□□□□□ -0.8
CMTM1-219ENST00000533953 MED6O75586 246 aa10.06□□□□□ -0.8
CMTM1-219ENST00000533953 IGLC1P0CG04 106 aa10.06□□□□□ -0.8
CMTM1-219ENST00000533953 NKX2-1P43699 371 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms