RNA–Protein interactions for RNA: ENST00000533948.1

SHARPIN-208, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-208ENST00000533948 RTBDNQ9BSG5 229 aaPredicted RBP10.55□□□□□ -0.72
SHARPIN-208ENST00000533948 SLIRPQ9GZT3 109 aaKnown RBP10.55□□□□□ -0.72
SHARPIN-208ENST00000533948 FBXL17Q9UF56 701 aa10.55□□□□□ -0.72
SHARPIN-208ENST00000533948 DNAH6Q9C0G6 4158 aa10.55□□□□□ -0.72
SHARPIN-208ENST00000533948 A0A0G2JRQ6 117 aa10.54□□□□□ -0.72
SHARPIN-208ENST00000533948 K7EMT4 169 aa10.54□□□□□ -0.72
SHARPIN-208ENST00000533948 NUPL2O15504 423 aaKnown RBP10.54□□□□□ -0.72
SHARPIN-208ENST00000533948 ATG12O94817 140 aa10.54□□□□□ -0.72
SHARPIN-208ENST00000533948 FCGR2BP31994 310 aaPredicted RBP10.54□□□□□ -0.72
SHARPIN-208ENST00000533948 TCTAP57738 103 aa10.54□□□□□ -0.72
SHARPIN-208ENST00000533948 NANOS2P60321 138 aaKnown RBP10.54□□□□□ -0.72
SHARPIN-208ENST00000533948 OR4C16Q8NGL9 310 aa10.54□□□□□ -0.72
SHARPIN-208ENST00000533948 C2CD4CQ8TF44 421 aa10.54□□□□□ -0.72
SHARPIN-208ENST00000533948 PINX1Q96BK5 328 aaKnown RBP10.54□□□□□ -0.72
SHARPIN-208ENST00000533948 TXN2Q99757 166 aa10.54□□□□□ -0.72
SHARPIN-208ENST00000533948 RABL2AQ9UBK7 228 aaPredicted RBP10.54□□□□□ -0.72
SHARPIN-208ENST00000533948 RABL2BQ9UNT1 228 aa10.54□□□□□ -0.72
SHARPIN-208ENST00000533948 C15orf62A8K5M9 175 aa10.53□□□□□ -0.72
SHARPIN-208ENST00000533948 DISC1C4P0D8 188 aa10.53□□□□□ -0.72
SHARPIN-208ENST00000533948 INS-IGF2F8WCM5 200 aa10.53□□□□□ -0.72
SHARPIN-208ENST00000533948 IFNA17P01571 189 aa10.53□□□□□ -0.72
SHARPIN-208ENST00000533948 OR5AC1P0C628 307 aa10.53□□□□□ -0.72
SHARPIN-208ENST00000533948 AKAIN1P0CW23 69 aa10.53□□□□□ -0.72
SHARPIN-208ENST00000533948 ETV6P41212 452 aa10.53□□□□□ -0.72
SHARPIN-208ENST00000533948 APRG1Q8IVJ8 170 aa10.53□□□□□ -0.72
SHARPIN-208ENST00000533948 SLC35G3Q8N808 338 aa10.53□□□□□ -0.72
SHARPIN-208ENST00000533948 RNASE11Q8TAA1 199 aaKnown RBP10.53□□□□□ -0.72
SHARPIN-208ENST00000533948 GLYATL2Q8WU03 294 aa10.53□□□□□ -0.72
SHARPIN-208ENST00000533948 RRNAD1Q96FB5 475 aaKnown RBP10.53□□□□□ -0.72
SHARPIN-208ENST00000533948 NXF2Q9GZY0 626 aaKnown RBP10.53□□□□□ -0.72
SHARPIN-208ENST00000533948 C14orf166Q9Y224 244 aaKnown RBP10.53□□□□□ -0.72
SHARPIN-208ENST00000533948 TEX13DA0A0J9YY54 714 aaPredicted RBP10.52□□□□□ -0.73
SHARPIN-208ENST00000533948 B3GALNT1O75752 331 aa10.52□□□□□ -0.73
SHARPIN-208ENST00000533948 CDS2O95674 445 aa10.52□□□□□ -0.73
SHARPIN-208ENST00000533948 SNCAP37840 140 aa10.52□□□□□ -0.73
SHARPIN-208ENST00000533948 RELQ04864 619 aaPredicted RBP10.52□□□□□ -0.73
SHARPIN-208ENST00000533948 Q6ZRM9 215 aa10.52□□□□□ -0.73
SHARPIN-208ENST00000533948 OR11H2Q8NH07 326 aa10.52□□□□□ -0.73
SHARPIN-208ENST00000533948 LHFPL5Q8TAF8 219 aa10.52□□□□□ -0.73
SHARPIN-208ENST00000533948 SOSTQ9BQB4 213 aa10.52□□□□□ -0.73
SHARPIN-208ENST00000533948 PDCD10Q9BUL8 212 aa10.52□□□□□ -0.73
SHARPIN-208ENST00000533948 TMEM222Q9H0R3 208 aa10.52□□□□□ -0.73
SHARPIN-208ENST00000533948 NAA60Q9H7X0 242 aa10.52□□□□□ -0.73
SHARPIN-208ENST00000533948 BATF3Q9NR55 127 aa10.52□□□□□ -0.73
SHARPIN-208ENST00000533948 SMPXQ9UHP9 88 aa10.52□□□□□ -0.73
SHARPIN-208ENST00000533948 GPR132Q9UNW8 380 aa10.52□□□□□ -0.73
SHARPIN-208ENST00000533948 PKHD1P08F94 4074 aa10.52□□□□□ -0.73
SHARPIN-208ENST00000533948 FAT2Q9NYQ8 4349 aa10.52□□□□□ -0.73
SHARPIN-208ENST00000533948 ANKRD20A5PA0PJZ0 165 aa10.51□□□□□ -0.73
SHARPIN-208ENST00000533948 GSTZ1O43708 216 aaPredicted RBP10.51□□□□□ -0.73
SHARPIN-208ENST00000533948 GNG7O60262 68 aa10.51□□□□□ -0.73
SHARPIN-208ENST00000533948 YIF1AO95070 293 aa10.51□□□□□ -0.73
SHARPIN-208ENST00000533948 RNASE2P10153 161 aaKnown RBP10.51□□□□□ -0.73
SHARPIN-208ENST00000533948 TNFSF8P32971 234 aa10.51□□□□□ -0.73
SHARPIN-208ENST00000533948 S100A5P33763 92 aa10.51□□□□□ -0.73
SHARPIN-208ENST00000533948 SURF2Q15527 256 aaPredicted RBP10.51□□□□□ -0.73
SHARPIN-208ENST00000533948 PVRIGQ6DKI7 326 aa10.51□□□□□ -0.73
SHARPIN-208ENST00000533948 OR51S1Q8NGJ8 323 aa10.51□□□□□ -0.73
SHARPIN-208ENST00000533948 OR10C1Q96KK4 312 aa10.51□□□□□ -0.73
SHARPIN-208ENST00000533948 DNAH2Q9P225 4427 aa10.51□□□□□ -0.73
SHARPIN-208ENST00000533948 ABCA13Q86UQ4 5058 aa10.51□□□□□ -0.73
SHARPIN-208ENST00000533948 IGHV3-49A0A0A0MS15 119 aa10.5□□□□□ -0.73
SHARPIN-208ENST00000533948 IGHV7-4-1A0A0J9YVY3 117 aa10.5□□□□□ -0.73
SHARPIN-208ENST00000533948 A6NHS1 94 aa10.5□□□□□ -0.73
SHARPIN-208ENST00000533948 CRYM-AS1A6NIL9 109 aa10.5□□□□□ -0.73
SHARPIN-208ENST00000533948 CHEK1O14757 476 aa10.5□□□□□ -0.73
SHARPIN-208ENST00000533948 HOXA1P49639 335 aaPredicted RBP10.5□□□□□ -0.73
SHARPIN-208ENST00000533948 SUB1P53999 127 aaKnown RBP eCLIP10.5□□□□□ -0.73
SHARPIN-208ENST00000533948 FAM219AQ8IW50 185 aa10.5□□□□□ -0.73
SHARPIN-208ENST00000533948 SELENOHQ8IZQ5 122 aaKnown RBP10.5□□□□□ -0.73
SHARPIN-208ENST00000533948 DUSP18Q8NEJ0 188 aa10.5□□□□□ -0.73
SHARPIN-208ENST00000533948 RBPMSQ93062 196 aaKnown RBP10.5□□□□□ -0.73
SHARPIN-208ENST00000533948 RNF2Q99496 336 aa10.5□□□□□ -0.73
SHARPIN-208ENST00000533948 PRRT1Q99946 306 aa10.5□□□□□ -0.73
SHARPIN-208ENST00000533948 RHPN1-AS1Q9BWJ2 59 aa10.5□□□□□ -0.73
SHARPIN-208ENST00000533948 C11orf68Q9H3H3 251 aaKnown RBP10.5□□□□□ -0.73
SHARPIN-208ENST00000533948 ENY2Q9NPA8 101 aa10.5□□□□□ -0.73
SHARPIN-208ENST00000533948 FABP12A6NFH5 140 aa10.49□□□□□ -0.73
SHARPIN-208ENST00000533948 IGLL5B9A064 214 aa10.49□□□□□ -0.73
SHARPIN-208ENST00000533948 NPBWR1P48145 328 aa10.49□□□□□ -0.73
SHARPIN-208ENST00000533948 TFPI2P48307 235 aa10.49□□□□□ -0.73
SHARPIN-208ENST00000533948 SPCS3P61009 180 aa10.49□□□□□ -0.73
SHARPIN-208ENST00000533948 PAFAH1B2P68402 229 aa10.49□□□□□ -0.73
SHARPIN-208ENST00000533948 DHODHQ02127 395 aa10.49□□□□□ -0.73
SHARPIN-208ENST00000533948 AARDQ4LEZ3 155 aa10.49□□□□□ -0.73
SHARPIN-208ENST00000533948 TMEM116Q8NCL8 245 aa10.49□□□□□ -0.73
SHARPIN-208ENST00000533948 GPR146Q96CH1 333 aa10.49□□□□□ -0.73
SHARPIN-208ENST00000533948 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.49□□□□□ -0.73
SHARPIN-208ENST00000533948 DYNC1H1Q14204 4646 aaKnown RBP10.48□□□□□ -0.73
SHARPIN-208ENST00000533948 IGHV3OR16-13A0A075B7E8 117 aa10.48□□□□□ -0.73
SHARPIN-208ENST00000533948 TRAV14DV4A0A0A6YYC5 116 aa10.48□□□□□ -0.73
SHARPIN-208ENST00000533948 IGHV3-74A0A0B4J1X5 117 aa10.48□□□□□ -0.73
SHARPIN-208ENST00000533948 C11orf94C9JXX5 98 aa10.48□□□□□ -0.73
SHARPIN-208ENST00000533948 TMEM50AO95807 157 aa10.48□□□□□ -0.73
SHARPIN-208ENST00000533948 MLANAQ16655 118 aa10.48□□□□□ -0.73
SHARPIN-208ENST00000533948 BSXQ3C1V8 233 aa10.48□□□□□ -0.73
SHARPIN-208ENST00000533948 TMEM268Q5VZI3 342 aa10.48□□□□□ -0.73
SHARPIN-208ENST00000533948 TOMM20LQ6UXN7 152 aa10.48□□□□□ -0.73
SHARPIN-208ENST00000533948 CENPSQ8N2Z9 138 aa10.48□□□□□ -0.73
SHARPIN-208ENST00000533948 OR52E5Q8NH55 327 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms