RNA–Protein interactions for RNA: ENST00000533644.5

BBS1-223, Transcript of Bardet-Biedl syndrome 1, human

TSL 3

Gene BBS1, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-223	ENST00000533644	YIF1A	O95070	293 aa		13.18	□□□□□ -0.3
BBS1-223	ENST00000533644	ZNF79	Q15937	498 aa		13.18	□□□□□ -0.3
BBS1-223	ENST00000533644	RHPN1-AS1	Q9BWJ2	59 aa		13.18	□□□□□ -0.3
BBS1-223	ENST00000533644	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.18	□□□□□ -0.3
BBS1-223	ENST00000533644	LYST	Q99698	3801 aa		13.17	□□□□□ -0.3
BBS1-223	ENST00000533644	CCDC160	A6NGH7	325 aa		13.17	□□□□□ -0.3
BBS1-223	ENST00000533644	LYL1	P12980	280 aa		13.17	□□□□□ -0.3
BBS1-223	ENST00000533644	SUPT4H1	P63272	117 aa	Known RBP	13.17	□□□□□ -0.3
BBS1-223	ENST00000533644	TOMM20L	Q6UXN7	152 aa		13.17	□□□□□ -0.3
BBS1-223	ENST00000533644	CCDC190	Q86UF4	302 aa		13.17	□□□□□ -0.3
BBS1-223	ENST00000533644	TMEM116	Q8NCL8	245 aa		13.17	□□□□□ -0.3
BBS1-223	ENST00000533644	RNF2	Q99496	336 aa		13.17	□□□□□ -0.3
BBS1-223	ENST00000533644	FAM110A	Q9BQ89	295 aa		13.17	□□□□□ -0.3
BBS1-223	ENST00000533644	GGTLC1	Q9BX51	225 aa		13.17	□□□□□ -0.3
BBS1-223	ENST00000533644	ZFAND3	Q9H8U3	227 aa		13.17	□□□□□ -0.3
BBS1-223	ENST00000533644	MRPL36	Q9P0J6	103 aa	Known RBP	13.17	□□□□□ -0.3
BBS1-223	ENST00000533644	KCNIP3	Q9Y2W7	256 aa		13.17	□□□□□ -0.3
BBS1-223	ENST00000533644	TRAV14DV4	A0A0A6YYC5	116 aa		13.16	□□□□□ -0.3
BBS1-223	ENST00000533644	OR4C46	A6NHA9	309 aa		13.16	□□□□□ -0.3
BBS1-223	ENST00000533644	TMEM50A	O95807	157 aa		13.16	□□□□□ -0.3
BBS1-223	ENST00000533644	S100A5	P33763	92 aa		13.16	□□□□□ -0.3
BBS1-223	ENST00000533644	FAU	P35544	74 aa	Known RBP	13.16	□□□□□ -0.3
BBS1-223	ENST00000533644	HTR2B	P41595	481 aa		13.16	□□□□□ -0.3
BBS1-223	ENST00000533644	AP3S2	P59780	193 aa		13.16	□□□□□ -0.3
BBS1-223	ENST00000533644	ODF3L2	Q3SX64	289 aa		13.16	□□□□□ -0.3
BBS1-223	ENST00000533644	PYDC2	Q56P42	97 aa		13.16	□□□□□ -0.3
BBS1-223	ENST00000533644	ZNF600	Q6ZNG1	722 aa		13.16	□□□□□ -0.3
BBS1-223	ENST00000533644	GINS3	Q9BRX5	216 aa		13.16	□□□□□ -0.3
BBS1-223	ENST00000533644	PRR13	Q9NZ81	148 aa		13.16	□□□□□ -0.3
BBS1-223	ENST00000533644	CACFD1	Q9UGQ2	172 aa		13.16	□□□□□ -0.3
BBS1-223	ENST00000533644	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.15	□□□□□ -0.3
BBS1-223	ENST00000533644		A0A0B4J2A0	478 aa		13.15	□□□□□ -0.3
BBS1-223	ENST00000533644	CLN5	O75503	358 aa		13.15	□□□□□ -0.3
BBS1-223	ENST00000533644	SULT1A3	P0DMM9	295 aa		13.15	□□□□□ -0.3
BBS1-223	ENST00000533644	SULT1A4	P0DMN0	295 aa		13.15	□□□□□ -0.3
BBS1-223	ENST00000533644	OPRK1	P41145	380 aa		13.15	□□□□□ -0.3
BBS1-223	ENST00000533644	C2orf83	Q53S99	150 aa		13.15	□□□□□ -0.3
BBS1-223	ENST00000533644	NMS	Q5H8A3	153 aa		13.15	□□□□□ -0.3
BBS1-223	ENST00000533644	FAM90A2P	Q658T7	463 aa		13.15	□□□□□ -0.3
BBS1-223	ENST00000533644	TOMM5	Q8N4H5	51 aa		13.15	□□□□□ -0.3
BBS1-223	ENST00000533644	OR4X1	Q8NH49	305 aa		13.15	□□□□□ -0.3
BBS1-223	ENST00000533644	DEDD2	Q8WXF8	326 aa		13.15	□□□□□ -0.3
BBS1-223	ENST00000533644	HEYL	Q9NQ87	328 aa	Predicted RBP	13.15	□□□□□ -0.3
BBS1-223	ENST00000533644	SHPK	Q9UHJ6	478 aa		13.15	□□□□□ -0.3
BBS1-223	ENST00000533644	BIRC6	Q9NR09	4857 aa		13.15	□□□□□ -0.3
BBS1-223	ENST00000533644	DNAH1	Q9P2D7	4330 aa		13.15	□□□□□ -0.31
BBS1-223	ENST00000533644	IGHV3-49	A0A0A0MS15	119 aa		13.14	□□□□□ -0.31
BBS1-223	ENST00000533644		A0A1B0GU03	582 aa		13.14	□□□□□ -0.31
BBS1-223	ENST00000533644	AKR1C4	P17516	323 aa		13.14	□□□□□ -0.31
BBS1-223	ENST00000533644	SRPX	P78539	464 aa		13.14	□□□□□ -0.31
BBS1-223	ENST00000533644	MLANA	Q16655	118 aa		13.14	□□□□□ -0.31
BBS1-223	ENST00000533644	SLC24A4	Q8NFF2	622 aa		13.14	□□□□□ -0.31
BBS1-223	ENST00000533644	TMEM170A	Q8WVE7	144 aa		13.14	□□□□□ -0.31
BBS1-223	ENST00000533644	VSIR	Q9H7M9	311 aa		13.14	□□□□□ -0.31
BBS1-223	ENST00000533644	UBQLN2	Q9UHD9	624 aa		13.14	□□□□□ -0.31
BBS1-223	ENST00000533644	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
BBS1-223	ENST00000533644	CEBPZOS	A8MTT3	80 aa		13.13	□□□□□ -0.31
BBS1-223	ENST00000533644	ANXA3	P12429	323 aa		13.13	□□□□□ -0.31
BBS1-223	ENST00000533644	CCR6	P51684	374 aa		13.13	□□□□□ -0.31
BBS1-223	ENST00000533644	LYZL2	Q7Z4W2	148 aa		13.13	□□□□□ -0.31
BBS1-223	ENST00000533644	LGI3	Q8N145	548 aa		13.13	□□□□□ -0.31
BBS1-223	ENST00000533644	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.13	□□□□□ -0.31
BBS1-223	ENST00000533644	STARD9	Q9P2P6	4700 aa		13.13	□□□□□ -0.31
BBS1-223	ENST00000533644	TENM2	Q9NT68	2774 aa		13.12	□□□□□ -0.31
BBS1-223	ENST00000533644	IGHV3OR16-13	A0A075B7E8	117 aa		13.12	□□□□□ -0.31
BBS1-223	ENST00000533644	IGHV3-74	A0A0B4J1X5	117 aa		13.12	□□□□□ -0.31
BBS1-223	ENST00000533644	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.12	□□□□□ -0.31
BBS1-223	ENST00000533644	IGKV1-17	P01599	117 aa		13.12	□□□□□ -0.31
BBS1-223	ENST00000533644	BMI1	P35226	326 aa		13.12	□□□□□ -0.31
BBS1-223	ENST00000533644	SMCO1	Q147U7	214 aa		13.12	□□□□□ -0.31
BBS1-223	ENST00000533644	ST8SIA2	Q92186	375 aa		13.12	□□□□□ -0.31
BBS1-223	ENST00000533644	HSPB7	Q9UBY9	170 aa		13.12	□□□□□ -0.31
BBS1-223	ENST00000533644	PIGBOS1	A0A0B4J2F0	54 aa		13.11	□□□□□ -0.31
BBS1-223	ENST00000533644	SCGB2A1	O75556	95 aa		13.11	□□□□□ -0.31
BBS1-223	ENST00000533644	NXPH3	O95157	252 aa		13.11	□□□□□ -0.31
BBS1-223	ENST00000533644	APOH	P02749	345 aa	Predicted RBP	13.11	□□□□□ -0.31
BBS1-223	ENST00000533644	CD5	P06127	495 aa		13.11	□□□□□ -0.31
BBS1-223	ENST00000533644	SLC25A4	P12235	298 aa		13.11	□□□□□ -0.31
BBS1-223	ENST00000533644	TNFRSF9	Q07011	255 aa		13.11	□□□□□ -0.31
BBS1-223	ENST00000533644	TMEM128	Q5BJH2	165 aa		13.11	□□□□□ -0.31
BBS1-223	ENST00000533644	ZFAND6	Q6FIF0	208 aa		13.11	□□□□□ -0.31
BBS1-223	ENST00000533644	PRSS54	Q6PEW0	395 aa		13.11	□□□□□ -0.31
BBS1-223	ENST00000533644	TMED4	Q7Z7H5	227 aa		13.11	□□□□□ -0.31
BBS1-223	ENST00000533644	SLC25A21	Q9BQT8	299 aa	Predicted RBP	13.11	□□□□□ -0.31
BBS1-223	ENST00000533644	SRR	Q9GZT4	340 aa		13.11	□□□□□ -0.31
BBS1-223	ENST00000533644	TRAV30	A0A087WSZ9	112 aa		13.1	□□□□□ -0.31
BBS1-223	ENST00000533644	DUXB	A0A1W2PPF3	345 aa		13.1	□□□□□ -0.31
BBS1-223	ENST00000533644	IGLC1	P0CG04	106 aa		13.1	□□□□□ -0.31
BBS1-223	ENST00000533644	NPY1R	P25929	384 aa		13.1	□□□□□ -0.31
BBS1-223	ENST00000533644	APOC4	P55056	127 aa		13.1	□□□□□ -0.31
BBS1-223	ENST00000533644	SPANXN2	Q5MJ10	180 aa		13.1	□□□□□ -0.31
BBS1-223	ENST00000533644	TCF24	Q7RTU0	167 aa		13.1	□□□□□ -0.31
BBS1-223	ENST00000533644	LILRB2	Q8N423	598 aa		13.1	□□□□□ -0.31
BBS1-223	ENST00000533644	OVOL2	Q9BRP0	275 aa		13.1	□□□□□ -0.31
BBS1-223	ENST00000533644	CSMD3	Q7Z407	3707 aa		13.1	□□□□□ -0.31
BBS1-223	ENST00000533644	KIR2DL5B	A0A0G2JN68	375 aa		13.09	□□□□□ -0.31
BBS1-223	ENST00000533644	KIR2DL5B	A0A0G2JPC4	375 aa		13.09	□□□□□ -0.31
BBS1-223	ENST00000533644	RND2	P52198	227 aa		13.09	□□□□□ -0.31
BBS1-223	ENST00000533644	CMC4	P56277	68 aa	Predicted RBP	13.09	□□□□□ -0.31
BBS1-223	ENST00000533644	TIGIT	Q495A1	244 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms