RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 TSC22D2O75157 780 aa8.71□□□□□ -1.02
TRAPPC4-213ENST00000533149 IGHG2P01859 326 aa8.71□□□□□ -1.02
TRAPPC4-213ENST00000533149 CHRNA7P36544 502 aa8.71□□□□□ -1.02
TRAPPC4-213ENST00000533149 CX3CL1P78423 397 aa8.71□□□□□ -1.02
TRAPPC4-213ENST00000533149 SSBP2P81877 361 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC4-213ENST00000533149 FOXE3Q13461 319 aa8.71□□□□□ -1.02
TRAPPC4-213ENST00000533149 FXYD3Q14802 87 aa8.71□□□□□ -1.02
TRAPPC4-213ENST00000533149 OPCMLQ14982 345 aa8.71□□□□□ -1.02
TRAPPC4-213ENST00000533149 C5orf56Q8N8D9 126 aa8.71□□□□□ -1.02
TRAPPC4-213ENST00000533149 OR10W1Q8NGF6 305 aa8.71□□□□□ -1.02
TRAPPC4-213ENST00000533149 BSCL2Q96G97 398 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC4-213ENST00000533149 OR4C12Q96R67 309 aa8.71□□□□□ -1.02
TRAPPC4-213ENST00000533149 ARL6Q9H0F7 186 aa8.71□□□□□ -1.02
TRAPPC4-213ENST00000533149 PLEKHA3Q9HB20 300 aa8.71□□□□□ -1.02
TRAPPC4-213ENST00000533149 STRAPQ9Y3F4 350 aaKnown RBP8.71□□□□□ -1.02
TRAPPC4-213ENST00000533149 SORL1Q92673 2214 aa8.71□□□□□ -1.02
TRAPPC4-213ENST00000533149 A8MZ25 164 aa8.7□□□□□ -1.02
TRAPPC4-213ENST00000533149 AP4M1O00189 453 aa8.7□□□□□ -1.02
TRAPPC4-213ENST00000533149 FGF16O43320 207 aa8.7□□□□□ -1.02
TRAPPC4-213ENST00000533149 CST7O76096 145 aa8.7□□□□□ -1.02
TRAPPC4-213ENST00000533149 IFNA10P01566 189 aa8.7□□□□□ -1.02
TRAPPC4-213ENST00000533149 ELANEP08246 267 aa8.7□□□□□ -1.02
TRAPPC4-213ENST00000533149 OR8U8P0C7N1 319 aa8.7□□□□□ -1.02
TRAPPC4-213ENST00000533149 S100A11P31949 105 aa8.7□□□□□ -1.02
TRAPPC4-213ENST00000533149 RPP30P78346 268 aaKnown RBP8.7□□□□□ -1.02
TRAPPC4-213ENST00000533149 ERHP84090 104 aaKnown RBP8.7□□□□□ -1.02
TRAPPC4-213ENST00000533149 EWSR1Q01844 656 aaKnown RBP eCLIP8.7□□□□□ -1.02
TRAPPC4-213ENST00000533149 NHLH2Q02577 135 aa8.7□□□□□ -1.02
TRAPPC4-213ENST00000533149 ZNF345Q14585 488 aa8.7□□□□□ -1.02
TRAPPC4-213ENST00000533149 TMEM14EPQ6UXP3 125 aa8.7□□□□□ -1.02
TRAPPC4-213ENST00000533149 ZNF562Q6V9R5 426 aa8.7□□□□□ -1.02
TRAPPC4-213ENST00000533149 RNF152Q8N8N0 203 aa8.7□□□□□ -1.02
TRAPPC4-213ENST00000533149 OR11H1Q8NG94 326 aa8.7□□□□□ -1.02
TRAPPC4-213ENST00000533149 LINC00476Q8WZB0 136 aa8.7□□□□□ -1.02
TRAPPC4-213ENST00000533149 PAIP2BQ9ULR5 123 aaKnown RBP8.7□□□□□ -1.02
TRAPPC4-213ENST00000533149 U3KQ87 197 aa8.7□□□□□ -1.02
TRAPPC4-213ENST00000533149 TNCP24821 2201 aa8.69□□□□□ -1.02
TRAPPC4-213ENST00000533149 C15orf62A8K5M9 175 aa8.69□□□□□ -1.02
TRAPPC4-213ENST00000533149 INS-IGF2F8WCM5 200 aa8.69□□□□□ -1.02
TRAPPC4-213ENST00000533149 HLA-DRB1P01911 266 aa8.69□□□□□ -1.02
TRAPPC4-213ENST00000533149 METTL15P1P0C7V9 234 aa8.69□□□□□ -1.02
TRAPPC4-213ENST00000533149 OR13C7P0DN81 318 aa8.69□□□□□ -1.02
TRAPPC4-213ENST00000533149 IGHV4-30-4P0DP06 118 aa8.69□□□□□ -1.02
TRAPPC4-213ENST00000533149 C4BPBP20851 252 aa8.69□□□□□ -1.02
TRAPPC4-213ENST00000533149 SULT1A1P50225 295 aa8.69□□□□□ -1.02
TRAPPC4-213ENST00000533149 ARL16Q0P5N6 197 aa8.69□□□□□ -1.02
TRAPPC4-213ENST00000533149 TMEM267Q0VDI3 215 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC4-213ENST00000533149 SRSF12Q8WXF0 261 aaKnown RBP8.69□□□□□ -1.02
TRAPPC4-213ENST00000533149 SMIM3Q9BZL3 60 aa8.69□□□□□ -1.02
TRAPPC4-213ENST00000533149 IGHV7-81A0A0B4J1V7 117 aa8.68□□□□□ -1.02
TRAPPC4-213ENST00000533149 KANTRA0A1W2PQU2 76 aa8.68□□□□□ -1.02
TRAPPC4-213ENST00000533149 IGLC7A0M8Q6 106 aa8.68□□□□□ -1.02
TRAPPC4-213ENST00000533149 TEX22C9J3V5 150 aa8.68□□□□□ -1.02
TRAPPC4-213ENST00000533149 BCL2L11O43521 198 aa8.68□□□□□ -1.02
TRAPPC4-213ENST00000533149 SAP30O75446 220 aa8.68□□□□□ -1.02
TRAPPC4-213ENST00000533149 SNCAP37840 140 aa8.68□□□□□ -1.02
TRAPPC4-213ENST00000533149 HTR2BP41595 481 aa8.68□□□□□ -1.02
TRAPPC4-213ENST00000533149 ATP5IP56385 69 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC4-213ENST00000533149 WT1-ASQ06250 92 aa8.68□□□□□ -1.02
TRAPPC4-213ENST00000533149 BAXQ07812 192 aa8.68□□□□□ -1.02
TRAPPC4-213ENST00000533149 HAPLN4Q86UW8 402 aa8.68□□□□□ -1.02
TRAPPC4-213ENST00000533149 TMEM217Q8N7C4 229 aa8.68□□□□□ -1.02
TRAPPC4-213ENST00000533149 GATAD1Q8WUU5 269 aa8.68□□□□□ -1.02
TRAPPC4-213ENST00000533149 TMEM170AQ8WVE7 144 aa8.68□□□□□ -1.02
TRAPPC4-213ENST00000533149 ARPC1AQ92747 370 aa8.68□□□□□ -1.02
TRAPPC4-213ENST00000533149 ARPC5LQ9BPX5 153 aa8.68□□□□□ -1.02
TRAPPC4-213ENST00000533149 HSPB9Q9BQS6 159 aa8.68□□□□□ -1.02
TRAPPC4-213ENST00000533149 WFDC1Q9HC57 220 aa8.68□□□□□ -1.02
TRAPPC4-213ENST00000533149 CYTL1Q9NRR1 136 aa8.68□□□□□ -1.02
TRAPPC4-213ENST00000533149 C19orf73Q9NVV2 129 aa8.68□□□□□ -1.02
TRAPPC4-213ENST00000533149 FBXL17Q9UF56 701 aa8.68□□□□□ -1.02
TRAPPC4-213ENST00000533149 LINC01548A6NM66 108 aa8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 PMS2P5A8MQ11 134 aa8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 TAAR5O14804 337 aa8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 LY6G6CO95867 125 aa8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 IFNA4P05014 189 aa8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 REG1AP05451 166 aa8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 APELAP0DMC3 54 aa8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 RNASE2P10153 161 aaKnown RBP8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 EGR2P11161 476 aaPredicted RBP8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 AREGP15514 252 aa8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 NPY1RP25929 384 aa8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 RAB11AP62491 216 aa8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 NDPQ00604 133 aa8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 ZNF616Q08AN1 781 aa8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 BSXQ3C1V8 233 aa8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 C2orf83Q53S99 150 aa8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 OR8G2PQ6IF36 304 aa8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 HSD17B13Q7Z5P4 300 aaPredicted RBP8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 STX12Q86Y82 276 aa8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 SLC24A4Q8NFF2 622 aa8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 OR1S2Q8NGQ3 325 aa8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 OR1N2Q8NGR9 330 aa8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 ABHD5Q8WTS1 349 aa8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 SRSF8Q9BRL6 282 aaKnown RBP8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 FAM103A1Q9BTL3 118 aaKnown RBP8.67□□□□□ -1.02
TRAPPC4-213ENST00000533149 OVOL1O14753 267 aa8.66□□□□□ -1.02
TRAPPC4-213ENST00000533149 SUB1P53999 127 aaKnown RBP eCLIP8.66□□□□□ -1.022e-10■■■■■ 75.6
TRAPPC4-213ENST00000533149 SLC51BQ86UW2 128 aa8.66□□□□□ -1.02
TRAPPC4-213ENST00000533149 OR10P1Q8NGE3 313 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms