RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 SMPXQ9UHP9 88 aa22.65■■□□□ 1.22
SSSCA1-207ENST00000533115 SUPT4H1P63272 117 aaKnown RBP22.64■■□□□ 1.21
SSSCA1-207ENST00000533115 IGHV7-4-1A0A0J9YVY3 117 aa22.63■■□□□ 1.21
SSSCA1-207ENST00000533115 HTR2BP41595 481 aa22.63■■□□□ 1.21
SSSCA1-207ENST00000533115 TMEM116Q8NCL8 245 aa22.63■■□□□ 1.21
SSSCA1-207ENST00000533115 HIPK2Q9H2X6 1198 aa22.63■■□□□ 1.21
SSSCA1-207ENST00000533115 HEYLQ9NQ87 328 aaPredicted RBP22.63■■□□□ 1.21
SSSCA1-207ENST00000533115 TMEM50AO95807 157 aa22.62■■□□□ 1.21
SSSCA1-207ENST00000533115 ANXA3P12429 323 aa22.62■■□□□ 1.21
SSSCA1-207ENST00000533115 OPRK1P41145 380 aa22.62■■□□□ 1.21
SSSCA1-207ENST00000533115 DEDD2Q8WXF8 326 aa22.62■■□□□ 1.21
SSSCA1-207ENST00000533115 FNDC4Q9H6D8 234 aaPredicted RBP22.62■■□□□ 1.21
SSSCA1-207ENST00000533115 CACFD1Q9UGQ2 172 aa22.62■■□□□ 1.21
SSSCA1-207ENST00000533115 TRAV14DV4A0A0A6YYC5 116 aa22.61■■□□□ 1.21
SSSCA1-207ENST00000533115 CHEK1O14757 476 aa22.61■■□□□ 1.21
SSSCA1-207ENST00000533115 SULT1A3P0DMM9 295 aa22.61■■□□□ 1.21
SSSCA1-207ENST00000533115 SULT1A4P0DMN0 295 aa22.61■■□□□ 1.21
SSSCA1-207ENST00000533115 RHPN1-AS1Q9BWJ2 59 aa22.61■■□□□ 1.21
SSSCA1-207ENST00000533115 A0A0B4J2A0 478 aa22.6■■□□□ 1.21
SSSCA1-207ENST00000533115 CEBPZOSA8MTT3 80 aa22.6■■□□□ 1.21
SSSCA1-207ENST00000533115 MLANAQ16655 118 aa22.6■■□□□ 1.21
SSSCA1-207ENST00000533115 SPANXN2Q5MJ10 180 aa22.6■■□□□ 1.21
SSSCA1-207ENST00000533115 TOMM20LQ6UXN7 152 aa22.6■■□□□ 1.21
SSSCA1-207ENST00000533115 RNF2Q99496 336 aa22.6■■□□□ 1.21
SSSCA1-207ENST00000533115 EDA2RQ9HAV5 297 aa22.6■■□□□ 1.21
SSSCA1-207ENST00000533115 RETNQ9HD89 108 aa22.6■■□□□ 1.21
SSSCA1-207ENST00000533115 SHPKQ9UHJ6 478 aa22.6■■□□□ 1.21
SSSCA1-207ENST00000533115 SRPXP78539 464 aa22.59■■□□□ 1.21
SSSCA1-207ENST00000533115 ZNF600Q6ZNG1 722 aa22.59■■□□□ 1.21
SSSCA1-207ENST00000533115 LYZL2Q7Z4W2 148 aa22.59■■□□□ 1.21
SSSCA1-207ENST00000533115 TMED4Q7Z7H5 227 aa22.59■■□□□ 1.21
SSSCA1-207ENST00000533115 LGI3Q8N145 548 aa22.59■■□□□ 1.21
SSSCA1-207ENST00000533115 OR4X1Q8NH49 305 aa22.59■■□□□ 1.21
SSSCA1-207ENST00000533115 GINS3Q9BRX5 216 aa22.59■■□□□ 1.21
SSSCA1-207ENST00000533115 MRPL36Q9P0J6 103 aaKnown RBP22.59■■□□□ 1.21
SSSCA1-207ENST00000533115 IGHV3-49A0A0A0MS15 119 aa22.58■■□□□ 1.21
SSSCA1-207ENST00000533115 CLN5O75503 358 aa22.58■■□□□ 1.21
SSSCA1-207ENST00000533115 NXPH3O95157 252 aa22.58■■□□□ 1.21
SSSCA1-207ENST00000533115 CCR6P51684 374 aa22.58■■□□□ 1.21
SSSCA1-207ENST00000533115 C2orf83Q53S99 150 aa22.58■■□□□ 1.21
SSSCA1-207ENST00000533115 NMSQ5H8A3 153 aa22.58■■□□□ 1.21
SSSCA1-207ENST00000533115 PUS1Q9Y606 427 aaKnown RBP eCLIP22.58■■□□□ 1.21
SSSCA1-207ENST00000533115 OR4C46A6NHA9 309 aa22.57■■□□□ 1.2
SSSCA1-207ENST00000533115 SMCO1Q147U7 214 aa22.57■■□□□ 1.2
SSSCA1-207ENST00000533115 TMEM128Q5BJH2 165 aa22.57■■□□□ 1.2
SSSCA1-207ENST00000533115 SLC24A4Q8NFF2 622 aa22.57■■□□□ 1.2
SSSCA1-207ENST00000533115 SLC25A21Q9BQT8 299 aaPredicted RBP22.57■■□□□ 1.2
SSSCA1-207ENST00000533115 GGTLC1Q9BX51 225 aa22.57■■□□□ 1.2
SSSCA1-207ENST00000533115 SRRQ9GZT4 340 aa22.57■■□□□ 1.2
SSSCA1-207ENST00000533115 UBQLN2Q9UHD9 624 aa22.57■■□□□ 1.2
SSSCA1-207ENST00000533115 RPS10-NUDT3A0A1W2PQS6 291 aa22.56■■□□□ 1.2
SSSCA1-207ENST00000533115 ZFAND3Q9H8U3 227 aa22.56■■□□□ 1.2
SSSCA1-207ENST00000533115 IGHV3OR16-13A0A075B7E8 117 aa22.55■■□□□ 1.2
SSSCA1-207ENST00000533115 LOC102724200A0A096LPH7 203 aaPredicted RBP22.55■■□□□ 1.2
SSSCA1-207ENST00000533115 IGHV3-74A0A0B4J1X5 117 aa22.55■■□□□ 1.2
SSSCA1-207ENST00000533115 SCGB2A1O75556 95 aa22.55■■□□□ 1.2
SSSCA1-207ENST00000533115 CASC10Q5T4H9 136 aa22.55■■□□□ 1.2
SSSCA1-207ENST00000533115 RNASEH2CQ8TDP1 164 aaKnown RBP22.55■■□□□ 1.2
SSSCA1-207ENST00000533115 FAM110AQ9BQ89 295 aa22.55■■□□□ 1.2
SSSCA1-207ENST00000533115 PIGBOS1A0A0B4J2F0 54 aa22.54■■□□□ 1.2
SSSCA1-207ENST00000533115 A0A1B0GU03 582 aa22.54■■□□□ 1.2
SSSCA1-207ENST00000533115 LYL1P12980 280 aa22.54■■□□□ 1.2
SSSCA1-207ENST00000533115 TNFRSF9Q07011 255 aa22.54■■□□□ 1.2
SSSCA1-207ENST00000533115 ODF3L2Q3SX64 289 aa22.54■■□□□ 1.2
SSSCA1-207ENST00000533115 HSPB7Q9UBY9 170 aa22.54■■□□□ 1.2
SSSCA1-207ENST00000533115 BMI1P35226 326 aa22.53■■□□□ 1.2
SSSCA1-207ENST00000533115 TMEM170AQ8WVE7 144 aa22.53■■□□□ 1.2
SSSCA1-207ENST00000533115 TRAV30A0A087WSZ9 112 aa22.52■■□□□ 1.2
SSSCA1-207ENST00000533115 DUXBA0A1W2PPF3 345 aa22.52■■□□□ 1.2
SSSCA1-207ENST00000533115 NPY1RP25929 384 aa22.52■■□□□ 1.2
SSSCA1-207ENST00000533115 FAM90A2PQ658T7 463 aa22.52■■□□□ 1.2
SSSCA1-207ENST00000533115 NOXA1Q86UR1 476 aa22.52■■□□□ 1.2
SSSCA1-207ENST00000533115 ST8SIA2Q92186 375 aa22.52■■□□□ 1.2
SSSCA1-207ENST00000533115 VSIRQ9H7M9 311 aa22.52■■□□□ 1.2
SSSCA1-207ENST00000533115 APOHP02749 345 aaPredicted RBP22.51■■□□□ 1.19
SSSCA1-207ENST00000533115 SLC25A4P12235 298 aa22.51■■□□□ 1.19
SSSCA1-207ENST00000533115 VAMP1P23763 118 aa22.51■■□□□ 1.19
SSSCA1-207ENST00000533115 PRSS54Q6PEW0 395 aa22.51■■□□□ 1.19
SSSCA1-207ENST00000533115 DTD1Q8TEA8 209 aa22.51■■□□□ 1.19
SSSCA1-207ENST00000533115 RBKSQ9H477 322 aa22.51■■□□□ 1.19
SSSCA1-207ENST00000533115 IGKV1-17P01599 117 aa22.5■■□□□ 1.19
SSSCA1-207ENST00000533115 CD5P06127 495 aa22.5■■□□□ 1.19
SSSCA1-207ENST00000533115 BAK1Q16611 211 aa22.5■■□□□ 1.19
SSSCA1-207ENST00000533115 TIGITQ495A1 244 aa22.5■■□□□ 1.19
SSSCA1-207ENST00000533115 LRTM2Q8N967 370 aa22.5■■□□□ 1.19
SSSCA1-207ENST00000533115 OR1S1Q8NH92 325 aa22.5■■□□□ 1.19
SSSCA1-207ENST00000533115 U3KQ87 197 aa22.5■■□□□ 1.19
SSSCA1-207ENST00000533115 IGKV3-7A0A075B6H7 116 aa22.49■■□□□ 1.19
SSSCA1-207ENST00000533115 IFNA10P01566 189 aa22.49■■□□□ 1.19
SSSCA1-207ENST00000533115 TFPI2P48307 235 aa22.49■■□□□ 1.19
SSSCA1-207ENST00000533115 INPP1P49441 399 aa22.49■■□□□ 1.19
SSSCA1-207ENST00000533115 RND2P52198 227 aa22.49■■□□□ 1.19
SSSCA1-207ENST00000533115 TRIQKQ629K1 86 aa22.49■■□□□ 1.19
SSSCA1-207ENST00000533115 ETFRF1Q6IPR1 90 aa22.49■■□□□ 1.19
SSSCA1-207ENST00000533115 TCF24Q7RTU0 167 aa22.49■■□□□ 1.19
SSSCA1-207ENST00000533115 SFT2D2O95562 160 aa22.48■■□□□ 1.19
SSSCA1-207ENST00000533115 NPPCP23582 126 aa22.48■■□□□ 1.19
SSSCA1-207ENST00000533115 PPP1R1AQ13522 171 aa22.48■■□□□ 1.19
SSSCA1-207ENST00000533115 RBMS2Q15434 407 aaKnown RBP22.48■■□□□ 1.19
SSSCA1-207ENST00000533115 CENPSQ8N2Z9 138 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms