RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 C8orf88P0DMB2 117 aa15.04■□□□□ -0
CPSF1-209ENST00000532725 ELLP55199 621 aaPredicted RBP15.04■□□□□ -0
CPSF1-209ENST00000532725 DEFB114Q30KQ6 69 aa15.04■□□□□ -0
CPSF1-209ENST00000532725 MZT2BQ6NZ67 158 aa15.04■□□□□ -0
CPSF1-209ENST00000532725 SLC24A4Q8NFF2 622 aa15.04■□□□□ -0
CPSF1-209ENST00000532725 DTD1Q8TEA8 209 aa15.04■□□□□ -0
CPSF1-209ENST00000532725 MITD1Q8WV92 249 aa15.04■□□□□ -0
CPSF1-209ENST00000532725 PALMDQ9NP74 551 aa15.04■□□□□ -0
CPSF1-209ENST00000532725 MRPL36Q9P0J6 103 aaKnown RBP15.04■□□□□ -0
CPSF1-209ENST00000532725 U3KQ87 197 aa15.04■□□□□ -0
CPSF1-209ENST00000532725 FAM240BA0A1B0GVZ2 78 aa15.03■□□□□ -0
CPSF1-209ENST00000532725 IZUMO1RA6ND01 250 aa15.03■□□□□ -0
CPSF1-209ENST00000532725 FAM90A26D6RGX4 464 aa15.03■□□□□ -0
CPSF1-209ENST00000532725 NUPL2O15504 423 aaKnown RBP15.03■□□□□ -0
CPSF1-209ENST00000532725 TMEM50AO95807 157 aa15.03■□□□□ -0
CPSF1-209ENST00000532725 NPBWR1P48145 328 aa15.03■□□□□ -0
CPSF1-209ENST00000532725 OR52B4Q8NGK2 314 aa15.03■□□□□ -0
CPSF1-209ENST00000532725 OR2K2Q8NGT1 345 aa15.03■□□□□ -0
CPSF1-209ENST00000532725 RNASEH2CQ8TDP1 164 aaKnown RBP15.03■□□□□ -0
CPSF1-209ENST00000532725 TMEM190Q8WZ59 177 aa15.03■□□□□ -0
CPSF1-209ENST00000532725 NUDT15Q9NV35 164 aa15.03■□□□□ -0
CPSF1-209ENST00000532725 TECRQ9NZ01 308 aaKnown RBP15.03■□□□□ -0
CPSF1-209ENST00000532725 UFC1Q9Y3C8 167 aa15.03■□□□□ -0
CPSF1-209ENST00000532725 MPTX1A8MV57 137 aa15.02■□□□□ -0
CPSF1-209ENST00000532725 GNG7O60262 68 aa15.02■□□□□ -0
CPSF1-209ENST00000532725 H2AFB2P0C5Z0 115 aa15.02■□□□□ -0
CPSF1-209ENST00000532725 NPY1RP25929 384 aa15.02■□□□□ -0
CPSF1-209ENST00000532725 OPRK1P41145 380 aa15.02■□□□□ -0
CPSF1-209ENST00000532725 CD300EQ496F6 205 aaPredicted RBP15.02■□□□□ -0
CPSF1-209ENST00000532725 NOXA1Q86UR1 476 aa15.02■□□□□ -0
CPSF1-209ENST00000532725 UXS1Q8NBZ7 420 aa15.02■□□□□ -0
CPSF1-209ENST00000532725 OR4X1Q8NH49 305 aa15.02■□□□□ -0
CPSF1-209ENST00000532725 CACNG8Q8WXS5 425 aa15.02■□□□□ -0
CPSF1-209ENST00000532725 IFNA10P01566 189 aa15.01□□□□□ -0.01
CPSF1-209ENST00000532725 ATP5IP56385 69 aaPredicted RBP15.01□□□□□ -0.01
CPSF1-209ENST00000532725 ID3Q02535 119 aa15.01□□□□□ -0.01
CPSF1-209ENST00000532725 RELQ04864 619 aaPredicted RBP15.01□□□□□ -0.01
CPSF1-209ENST00000532725 MRPL27Q9P0M9 148 aaKnown RBP15.01□□□□□ -0.01
CPSF1-209ENST00000532725 ZNF785A8K8V0 405 aa15□□□□□ -0.01
CPSF1-209ENST00000532725 K7EMT4 169 aa15□□□□□ -0.01
CPSF1-209ENST00000532725 CLN5O75503 358 aa15□□□□□ -0.01
CPSF1-209ENST00000532725 IFNA21P01568 189 aa15□□□□□ -0.01
CPSF1-209ENST00000532725 DCTN2Q13561 401 aaKnown RBP15□□□□□ -0.01
CPSF1-209ENST00000532725 LCN12Q6JVE5 192 aa15□□□□□ -0.01
CPSF1-209ENST00000532725 Q8N1Y9 231 aa15□□□□□ -0.01
CPSF1-209ENST00000532725 MARC2Q969Z3 335 aa15□□□□□ -0.01
CPSF1-209ENST00000532725 MLXQ9UH92 298 aa15□□□□□ -0.01
CPSF1-209ENST00000532725 RPS10-NUDT3A0A1W2PQS6 291 aa14.99□□□□□ -0.01
CPSF1-209ENST00000532725 SYNGR2O43760 224 aa14.99□□□□□ -0.01
CPSF1-209ENST00000532725 MED6O75586 246 aa14.99□□□□□ -0.01
CPSF1-209ENST00000532725 PRSS54Q6PEW0 395 aa14.99□□□□□ -0.01
CPSF1-209ENST00000532725 DYNLRB2Q8TF09 96 aa14.99□□□□□ -0.01
CPSF1-209ENST00000532725 ZNF431Q8TF32 576 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-209ENST00000532725 OR10C1Q96KK4 312 aa14.99□□□□□ -0.01
CPSF1-209ENST00000532725 SEC22CQ9BRL7 303 aa14.99□□□□□ -0.01
CPSF1-209ENST00000532725 MAGT1Q9H0U3 335 aa14.99□□□□□ -0.01
CPSF1-209ENST00000532725 DAZ1Q9NQZ3 744 aaKnown RBP14.99□□□□□ -0.01
CPSF1-209ENST00000532725 IGHV3OR16-8A0A075B7F1 116 aa14.98□□□□□ -0.01
CPSF1-209ENST00000532725 C15orf62A8K5M9 175 aa14.98□□□□□ -0.01
CPSF1-209ENST00000532725 SLC25A4P12235 298 aa14.98□□□□□ -0.01
CPSF1-209ENST00000532725 TMEM116Q8NCL8 245 aa14.98□□□□□ -0.01
CPSF1-209ENST00000532725 OR4D5Q8NGN0 318 aa14.98□□□□□ -0.01
CPSF1-209ENST00000532725 C20orf24Q9BUV8 137 aa14.98□□□□□ -0.01
CPSF1-209ENST00000532725 IAPPP10997 89 aa14.97□□□□□ -0.01
CPSF1-209ENST00000532725 ETFRF1Q6IPR1 90 aa14.97□□□□□ -0.01
CPSF1-209ENST00000532725 TOMM20LQ6UXN7 152 aa14.97□□□□□ -0.01
CPSF1-209ENST00000532725 CIB3Q96Q77 187 aaPredicted RBP14.97□□□□□ -0.01
CPSF1-209ENST00000532725 SELENOKQ9Y6D0 94 aa14.97□□□□□ -0.01
CPSF1-209ENST00000532725 SMAD5-AS1Q9Y6J3 95 aa14.97□□□□□ -0.01
CPSF1-209ENST00000532725 TRAV30A0A087WSZ9 112 aa14.96□□□□□ -0.01
CPSF1-209ENST00000532725 ZNF207O43670 478 aaKnown RBP14.96□□□□□ -0.01
CPSF1-209ENST00000532725 YIF1AO95070 293 aa14.96□□□□□ -0.01
CPSF1-209ENST00000532725 IGKV1-17P01599 117 aa14.96□□□□□ -0.01
CPSF1-209ENST00000532725 CD69Q07108 199 aa14.96□□□□□ -0.01
CPSF1-209ENST00000532725 ZNF600Q6ZNG1 722 aa14.96□□□□□ -0.01
CPSF1-209ENST00000532725 NRARPQ7Z6K4 114 aa14.96□□□□□ -0.01
CPSF1-209ENST00000532725 ENKURQ8TC29 256 aa14.96□□□□□ -0.01
CPSF1-209ENST00000532725 DNAH9Q9NYC9 4486 aa14.96□□□□□ -0.02
CPSF1-209ENST00000532725 WRBO00258 174 aa14.95□□□□□ -0.02
CPSF1-209ENST00000532725 IFNA4P05014 189 aa14.95□□□□□ -0.02
CPSF1-209ENST00000532725 IL5P05113 134 aa14.95□□□□□ -0.02
CPSF1-209ENST00000532725 GPX4P36969 197 aaPredicted RBP14.95□□□□□ -0.02
CPSF1-209ENST00000532725 NKX2-1P43699 371 aaPredicted RBP14.95□□□□□ -0.02
CPSF1-209ENST00000532725 RND2P52198 227 aa14.95□□□□□ -0.02
CPSF1-209ENST00000532725 IAH1Q2TAA2 248 aaPredicted RBP14.95□□□□□ -0.02
CPSF1-209ENST00000532725 BTNL8Q6UX41 500 aa14.95□□□□□ -0.02
CPSF1-209ENST00000532725 TMEM61Q8N0U2 210 aa14.95□□□□□ -0.02
CPSF1-209ENST00000532725 C12orf45Q8N5I9 185 aaPredicted RBP14.95□□□□□ -0.02
CPSF1-209ENST00000532725 WDR89Q96FK6 387 aaPredicted RBP14.95□□□□□ -0.02
CPSF1-209ENST00000532725 B9D2Q9BPU9 175 aa14.95□□□□□ -0.02
CPSF1-209ENST00000532725 SMPXQ9UHP9 88 aa14.95□□□□□ -0.02
CPSF1-209ENST00000532725 PUS1Q9Y606 427 aaKnown RBP eCLIP14.95□□□□□ -0.02
CPSF1-209ENST00000532725 TRAV14DV4A0A0A6YYC5 116 aa14.94□□□□□ -0.02
CPSF1-209ENST00000532725 IGLC1P0CG04 106 aa14.94□□□□□ -0.02
CPSF1-209ENST00000532725 POLR2GP62487 172 aaKnown RBP eCLIP14.94□□□□□ -0.02
CPSF1-209ENST00000532725 TIGITQ495A1 244 aa14.94□□□□□ -0.02
CPSF1-209ENST00000532725 ZBTB8BQ8NAP8 495 aaPredicted RBP14.94□□□□□ -0.02
CPSF1-209ENST00000532725 NPIPB3Q92617 1050 aa14.94□□□□□ -0.02
CPSF1-209ENST00000532725 ZFAND3Q9H8U3 227 aa14.94□□□□□ -0.02
CPSF1-209ENST00000532725 TRAV25A0A0B4J276 109 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms