RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 HIST1H2BJP06899 126 aa12.63□□□□□ -0.39
PCDHA3-202ENST00000532566 HIST1H2BOP23527 126 aa12.63□□□□□ -0.39
PCDHA3-202ENST00000532566 HIST1H2BBP33778 126 aa12.63□□□□□ -0.39
PCDHA3-202ENST00000532566 DLX6P56179 175 aa12.63□□□□□ -0.39
PCDHA3-202ENST00000532566 HIST1H2BDP58876 126 aa12.63□□□□□ -0.39
PCDHA3-202ENST00000532566 HIST1H2BCP62807 126 aa12.63□□□□□ -0.39
PCDHA3-202ENST00000532566 HIST2H2BEQ16778 126 aa12.63□□□□□ -0.39
PCDHA3-202ENST00000532566 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.63□□□□□ -0.39
PCDHA3-202ENST00000532566 HIST1H2BHQ93079 126 aa12.63□□□□□ -0.39
PCDHA3-202ENST00000532566 HIST1H2BNQ99877 126 aa12.63□□□□□ -0.39
PCDHA3-202ENST00000532566 HIST1H2BMQ99879 126 aa12.63□□□□□ -0.39
PCDHA3-202ENST00000532566 TRBV24-1A0A075B6N3 115 aa12.63□□□□□ -0.39
PCDHA3-202ENST00000532566 DKK1O94907 266 aa12.63□□□□□ -0.39
PCDHA3-202ENST00000532566 C10orf55Q5SWW7 151 aa12.63□□□□□ -0.39
PCDHA3-202ENST00000532566 NUP37Q8NFH4 326 aa12.63□□□□□ -0.39
PCDHA3-202ENST00000532566 ZFP30Q9Y2G7 519 aa12.63□□□□□ -0.39
PCDHA3-202ENST00000532566 TRAV3A0A0B4J244 114 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 FOLR2P14207 255 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 CDKN1AP38936 164 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 FOXA3P55318 350 aaPredicted RBP12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 LINC00205P59089 165 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 C2orf83Q53S99 150 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 OCC1Q8TAD7 63 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 IGHV3OR16-13A0A075B7E8 117 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 IGHV3-74A0A0B4J1X5 117 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 ZNF25P17030 456 aaPredicted RBP12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 LMO1P25800 156 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 TFPI2P48307 235 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 CX3CL1P78423 397 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 MST1LQ2TV78 715 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 COL5A1-AS1Q5SY13 56 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 TMEM200BQ69YZ2 307 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 TMEM170AQ8WVE7 144 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 SIAH2O43255 324 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 ADCYAP1P18509 176 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 Q9H3A6 140 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 UQCR10Q9UDW1 63 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 ZGRF1Q86YA3 2104 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 PYYP10082 97 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 FAM106AQ4KMX7 169 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 DTX1Q86Y01 620 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 DYNLRB2Q8TF09 96 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 ELOVL1Q9BW60 279 aa12.62□□□□□ -0.39
PCDHA3-202ENST00000532566 IGHV3-23P01764 117 aa12.61□□□□□ -0.39
PCDHA3-202ENST00000532566 HLA-DRB1P01911 266 aa12.61□□□□□ -0.39
PCDHA3-202ENST00000532566 ZNF672Q499Z4 452 aaPredicted RBP12.61□□□□□ -0.39
PCDHA3-202ENST00000532566 FMC1Q96HJ9 113 aa12.61□□□□□ -0.39
PCDHA3-202ENST00000532566 GAFA1Q96PS6 74 aa12.61□□□□□ -0.39
PCDHA3-202ENST00000532566 CCL19Q99731 98 aa12.61□□□□□ -0.39
PCDHA3-202ENST00000532566 RNASE7Q9H1E1 156 aaKnown RBP12.61□□□□□ -0.39
PCDHA3-202ENST00000532566 DGAT2L7PQ6IED9 249 aa12.61□□□□□ -0.39
PCDHA3-202ENST00000532566 TIMM23O14925 209 aa12.61□□□□□ -0.39
PCDHA3-202ENST00000532566 TEX38Q6PEX7 206 aa12.61□□□□□ -0.39
PCDHA3-202ENST00000532566 OSTCQ9NRP0 149 aa12.61□□□□□ -0.39
PCDHA3-202ENST00000532566 GOLGB1Q14789 3259 aaKnown RBP12.61□□□□□ -0.39
PCDHA3-202ENST00000532566 C15orf62A8K5M9 175 aa12.61□□□□□ -0.39
PCDHA3-202ENST00000532566 IGHV1-8P0DP01 117 aa12.61□□□□□ -0.39
PCDHA3-202ENST00000532566 GPR183P32249 361 aa12.61□□□□□ -0.39
PCDHA3-202ENST00000532566 EBLN2Q6P2I7 272 aa12.61□□□□□ -0.39
PCDHA3-202ENST00000532566 TCF24Q7RTU0 167 aa12.61□□□□□ -0.39
PCDHA3-202ENST00000532566 RPP21Q9H633 154 aaKnown RBP12.61□□□□□ -0.39
PCDHA3-202ENST00000532566 FOXI3A8MTJ6 420 aaPredicted RBP12.6□□□□□ -0.39
PCDHA3-202ENST00000532566 UBE2CO00762 179 aa12.6□□□□□ -0.39
PCDHA3-202ENST00000532566 OR10AG1Q8NH19 301 aa12.6□□□□□ -0.39
PCDHA3-202ENST00000532566 MAP1LC3AQ9H492 121 aa12.6□□□□□ -0.39
PCDHA3-202ENST00000532566 ZMAT5Q9UDW3 170 aaKnown RBP12.6□□□□□ -0.39
PCDHA3-202ENST00000532566 TRGV3P03979 118 aa12.6□□□□□ -0.39
PCDHA3-202ENST00000532566 MGST2Q99735 147 aa12.6□□□□□ -0.39
PCDHA3-202ENST00000532566 GSN-AS1Q9NRJ2 163 aa12.6□□□□□ -0.39
PCDHA3-202ENST00000532566 DPRXA6NFQ7 191 aa12.6□□□□□ -0.39
PCDHA3-202ENST00000532566 THBDP07204 575 aa12.6□□□□□ -0.39
PCDHA3-202ENST00000532566 CXCL1P09341 107 aa12.6□□□□□ -0.39
PCDHA3-202ENST00000532566 CD24P25063 80 aa12.6□□□□□ -0.39
PCDHA3-202ENST00000532566 HERVK_113P61574 105 aa12.6□□□□□ -0.39
PCDHA3-202ENST00000532566 ADIPOQQ15848 244 aa12.6□□□□□ -0.39
PCDHA3-202ENST00000532566 Q1RN00 199 aa12.6□□□□□ -0.39
PCDHA3-202ENST00000532566 SCGB1D4Q6XE38 83 aa12.6□□□□□ -0.39
PCDHA3-202ENST00000532566 CBY3A6NI87 242 aa12.59□□□□□ -0.39
PCDHA3-202ENST00000532566 PVRIGQ6DKI7 326 aa12.59□□□□□ -0.39
PCDHA3-202ENST00000532566 ATG101Q9BSB4 218 aa12.59□□□□□ -0.39
PCDHA3-202ENST00000532566 CHODLQ9H9P2 273 aa12.59□□□□□ -0.39
PCDHA3-202ENST00000532566 YLPM1P49750 1951 aaKnown RBP12.59□□□□□ -0.39
PCDHA3-202ENST00000532566 IGHV2-26A0A0B4J1V2 119 aa12.59□□□□□ -0.39
PCDHA3-202ENST00000532566 A0A1B0GUT8 65 aa12.59□□□□□ -0.39
PCDHA3-202ENST00000532566 ERVK11-1P61568 191 aa12.59□□□□□ -0.39
PCDHA3-202ENST00000532566 SLC25A48Q6ZT89 311 aaKnown RBP12.59□□□□□ -0.39
PCDHA3-202ENST00000532566 TMEM167AQ8TBQ9 72 aa12.59□□□□□ -0.39
PCDHA3-202ENST00000532566 AP5S1Q9NUS5 200 aa12.59□□□□□ -0.39
PCDHA3-202ENST00000532566 SOX21Q9Y651 276 aaPredicted RBP12.59□□□□□ -0.39
PCDHA3-202ENST00000532566 CUL9Q8IWT3 2517 aa12.59□□□□□ -0.39
PCDHA3-202ENST00000532566 IZUMO1RA6ND01 250 aa12.59□□□□□ -0.39
PCDHA3-202ENST00000532566 GTF2H5Q6ZYL4 71 aa12.59□□□□□ -0.39
PCDHA3-202ENST00000532566 EPDR1Q9UM22 224 aa12.59□□□□□ -0.39
PCDHA3-202ENST00000532566 TMEM50AO95807 157 aa12.59□□□□□ -0.39
PCDHA3-202ENST00000532566 BTF3P20290 206 aaKnown RBP12.59□□□□□ -0.39
PCDHA3-202ENST00000532566 WDR86Q86TI4 376 aa12.59□□□□□ -0.39
PCDHA3-202ENST00000532566 PARD6GQ9BYG4 376 aaPredicted RBP12.59□□□□□ -0.39
PCDHA3-202ENST00000532566 IGHV3-49A0A0A0MS15 119 aa12.58□□□□□ -0.4
PCDHA3-202ENST00000532566 A6NDN8 102 aa12.58□□□□□ -0.4
PCDHA3-202ENST00000532566 TCF23Q7RTU1 214 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms