RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 TMEM133Q9H2Q1 129 aa13.58□□□□□ -0.24
VPS26B-206ENST00000531741 SH3BGRL2Q9UJC5 107 aa13.58□□□□□ -0.24
VPS26B-206ENST00000531741 IGHV1-69-2A0A0G2JMI3 117 aa13.57□□□□□ -0.24
VPS26B-206ENST00000531741 COX7A2P2O60397 106 aa13.57□□□□□ -0.24
VPS26B-206ENST00000531741 FSTL3O95633 263 aa13.57□□□□□ -0.24
VPS26B-206ENST00000531741 CRYGCP07315 174 aa13.57□□□□□ -0.24
VPS26B-206ENST00000531741 APOBEC3AP31941 199 aaPredicted RBP13.57□□□□□ -0.24
VPS26B-206ENST00000531741 PAFAH1B2P68402 229 aa13.57□□□□□ -0.24
VPS26B-206ENST00000531741 Q0VG73 95 aa13.57□□□□□ -0.24
VPS26B-206ENST00000531741 ETFRF1Q6IPR1 90 aa13.57□□□□□ -0.24
VPS26B-206ENST00000531741 WDR73Q6P4I2 378 aa13.57□□□□□ -0.24
VPS26B-206ENST00000531741 NPIPB3Q92617 1050 aa13.57□□□□□ -0.24
VPS26B-206ENST00000531741 A0A1W2PPI3 338 aa13.57□□□□□ -0.24
VPS26B-206ENST00000531741 ZNF705GA8MUZ8 300 aaPredicted RBP13.57□□□□□ -0.24
VPS26B-206ENST00000531741 B9A039 149 aa13.57□□□□□ -0.24
VPS26B-206ENST00000531741 SLC25A17O43808 307 aa13.57□□□□□ -0.24
VPS26B-206ENST00000531741 NUPR1O60356 82 aa13.57□□□□□ -0.24
VPS26B-206ENST00000531741 SSBP2P81877 361 aaPredicted RBP13.57□□□□□ -0.24
VPS26B-206ENST00000531741 RBPJQ06330 500 aa13.57□□□□□ -0.24
VPS26B-206ENST00000531741 CMTM2Q8TAZ6 248 aa13.57□□□□□ -0.24
VPS26B-206ENST00000531741 ZNF355PQ9NSJ1 428 aa13.57□□□□□ -0.24
VPS26B-206ENST00000531741 TP53TG3Q9ULZ0 132 aa13.57□□□□□ -0.24
VPS26B-206ENST00000531741 RP1L1Q8IWN7 2480 aaPredicted RBP13.57□□□□□ -0.24
VPS26B-206ENST00000531741 FCN1O00602 326 aa13.56□□□□□ -0.24
VPS26B-206ENST00000531741 CRISP2P16562 243 aa13.56□□□□□ -0.24
VPS26B-206ENST00000531741 PAX2Q02962 417 aa13.56□□□□□ -0.24
VPS26B-206ENST00000531741 TBR1Q16650 682 aa13.56□□□□□ -0.24
VPS26B-206ENST00000531741 PATE2Q6UY27 113 aa13.56□□□□□ -0.24
VPS26B-206ENST00000531741 OR8I2Q8N0Y5 310 aa13.56□□□□□ -0.24
VPS26B-206ENST00000531741 BEND2Q8NDZ0 799 aa13.56□□□□□ -0.24
VPS26B-206ENST00000531741 PAXXQ9BUH6 204 aa13.56□□□□□ -0.24
VPS26B-206ENST00000531741 TRAV5A0A0B4J249 113 aa13.55□□□□□ -0.24
VPS26B-206ENST00000531741 A0A1B0GUS0 222 aa13.55□□□□□ -0.24
VPS26B-206ENST00000531741 IER3P46695 156 aa13.55□□□□□ -0.24
VPS26B-206ENST00000531741 RANP62826 216 aaKnown RBP13.55□□□□□ -0.24
VPS26B-206ENST00000531741 LBHQ53QV2 105 aaPredicted RBP13.55□□□□□ -0.24
VPS26B-206ENST00000531741 VKORC1Q9BQB6 163 aa13.55□□□□□ -0.24
VPS26B-206ENST00000531741 SMIM27A0A1W2PRY6 76 aa13.55□□□□□ -0.24
VPS26B-206ENST00000531741 IGLC7A0M8Q6 106 aa13.55□□□□□ -0.24
VPS26B-206ENST00000531741 SNURFLB1AK76 121 aa13.55□□□□□ -0.24
VPS26B-206ENST00000531741 CRYGBP07316 175 aa13.55□□□□□ -0.24
VPS26B-206ENST00000531741 SPACA3Q8IXA5 215 aa13.55□□□□□ -0.24
VPS26B-206ENST00000531741 LINC00469Q8N7U9 141 aa13.55□□□□□ -0.24
VPS26B-206ENST00000531741 STXBP6Q8NFX7 210 aa13.55□□□□□ -0.24
VPS26B-206ENST00000531741 MS4A10Q96PG2 267 aa13.55□□□□□ -0.24
VPS26B-206ENST00000531741 RNASE7Q9H1E1 156 aaKnown RBP13.55□□□□□ -0.24
VPS26B-206ENST00000531741 GRIFINA4D1Z8 144 aa13.54□□□□□ -0.24
VPS26B-206ENST00000531741 IGLV1-47P01700 117 aa13.54□□□□□ -0.24
VPS26B-206ENST00000531741 LINC00310P59036 64 aa13.54□□□□□ -0.24
VPS26B-206ENST00000531741 TPPP2P59282 170 aa13.54□□□□□ -0.24
VPS26B-206ENST00000531741 IBA57Q5T440 356 aaKnown RBP13.54□□□□□ -0.24
VPS26B-206ENST00000531741 UNQ6494/PRO21346Q6UXR6 183 aa13.54□□□□□ -0.24
VPS26B-206ENST00000531741 FAM231DQ6ZW35 169 aa13.54□□□□□ -0.24
VPS26B-206ENST00000531741 ST6GALNAC3Q8NDV1 305 aa13.54□□□□□ -0.24
VPS26B-206ENST00000531741 NDUFAF3Q9BU61 184 aa13.54□□□□□ -0.24
VPS26B-206ENST00000531741 TPSG1Q9NRR2 321 aa13.54□□□□□ -0.24
VPS26B-206ENST00000531741 RALYQ9UKM9 306 aaKnown RBP13.54□□□□□ -0.24
VPS26B-206ENST00000531741 AMMECR1Q9Y4X0 333 aaPredicted RBP13.54□□□□□ -0.24
VPS26B-206ENST00000531741 MGAQ8IWI9 3026 aa13.54□□□□□ -0.24
VPS26B-206ENST00000531741 RBP4P02753 201 aa13.54□□□□□ -0.24
VPS26B-206ENST00000531741 CASP6P55212 293 aa13.54□□□□□ -0.24
VPS26B-206ENST00000531741 ZNF329Q86UD4 541 aa13.54□□□□□ -0.24
VPS26B-206ENST00000531741 FXYD5Q96DB9 178 aa13.54□□□□□ -0.24
VPS26B-206ENST00000531741 RITA1Q96K30 269 aa13.54□□□□□ -0.24
VPS26B-206ENST00000531741 TRGV9Q99603 122 aa13.54□□□□□ -0.24
VPS26B-206ENST00000531741 MRPL36Q9P0J6 103 aaKnown RBP13.54□□□□□ -0.24
VPS26B-206ENST00000531741 K7ENP7 123 aa13.53□□□□□ -0.24
VPS26B-206ENST00000531741 CD3EP07766 207 aa13.53□□□□□ -0.24
VPS26B-206ENST00000531741 MYCNOSP40205 109 aa13.53□□□□□ -0.24
VPS26B-206ENST00000531741 PRRX1P54821 245 aa13.53□□□□□ -0.24
VPS26B-206ENST00000531741 NAGKQ9UJ70 344 aa13.53□□□□□ -0.24
VPS26B-206ENST00000531741 ARFGEF3Q5TH69 2177 aa13.53□□□□□ -0.24
VPS26B-206ENST00000531741 AKAP13Q12802 2813 aa13.53□□□□□ -0.24
VPS26B-206ENST00000531741 IGHV2-26A0A0B4J1V2 119 aa13.52□□□□□ -0.24
VPS26B-206ENST00000531741 CORTO00230 105 aa13.52□□□□□ -0.24
VPS26B-206ENST00000531741 PYYP10082 97 aa13.52□□□□□ -0.24
VPS26B-206ENST00000531741 PRR30Q53SZ7 412 aaPredicted RBP13.52□□□□□ -0.24
VPS26B-206ENST00000531741 TMEM136Q6ZRR5 245 aa13.52□□□□□ -0.24
VPS26B-206ENST00000531741 TMEM116Q8NCL8 245 aa13.52□□□□□ -0.24
VPS26B-206ENST00000531741 PEX7O00628 323 aa13.52□□□□□ -0.25
VPS26B-206ENST00000531741 SERF1AO75920 110 aa13.52□□□□□ -0.25
VPS26B-206ENST00000531741 RPL27AP46776 148 aaKnown RBP13.52□□□□□ -0.25
VPS26B-206ENST00000531741 PERPQ96FX8 193 aa13.52□□□□□ -0.25
VPS26B-206ENST00000531741 TNFRSF19Q9NS68 423 aa13.52□□□□□ -0.25
VPS26B-206ENST00000531741 CEP250Q9BV73 2442 aa13.52□□□□□ -0.25
VPS26B-206ENST00000531741 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.51□□□□□ -0.25
VPS26B-206ENST00000531741 C22orf46C9J442 243 aa13.51□□□□□ -0.25
VPS26B-206ENST00000531741 ENSAO43768 121 aaKnown RBP13.51□□□□□ -0.25
VPS26B-206ENST00000531741 SCGB1D1O95968 90 aa13.51□□□□□ -0.25
VPS26B-206ENST00000531741 HLA-DQA1P01909 254 aa13.51□□□□□ -0.25
VPS26B-206ENST00000531741 FRMD6-AS1P0C7T7 363 aa13.51□□□□□ -0.25
VPS26B-206ENST00000531741 MGST1P10620 155 aaKnown RBP13.51□□□□□ -0.25
VPS26B-206ENST00000531741 COMPP49747 757 aaPredicted RBP13.51□□□□□ -0.25
VPS26B-206ENST00000531741 FXYD3Q14802 87 aa13.51□□□□□ -0.25
VPS26B-206ENST00000531741 C1orf194Q5T5A4 169 aa13.51□□□□□ -0.25
VPS26B-206ENST00000531741 RASL11AQ6T310 242 aa13.51□□□□□ -0.25
VPS26B-206ENST00000531741 ZNF841Q6ZN19 808 aa13.51□□□□□ -0.25
VPS26B-206ENST00000531741 LINC00305Q7Z4B0 112 aa13.51□□□□□ -0.25
VPS26B-206ENST00000531741 C22orf15Q8WYQ4 148 aa13.51□□□□□ -0.25
VPS26B-206ENST00000531741 SMIM12Q96EX1 92 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms