RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 IGHV2-26A0A0B4J1V2 119 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 LOC107984640A0A0U1RRK4 108 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 IZUMO1RA6ND01 250 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 OR2T8A6NH00 312 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 ZNF705GA8MUZ8 300 aaPredicted RBP2.33□□□□□ -2.04
PTPRK-220ENST00000531466 H3BP45 60 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 LY6LH3BQJ8 138 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 UBE2L6O14933 153 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 UQCRQO14949 82 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 LYZL6O75951 148 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 NAPSAO96009 420 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 MT-ND6P03923 174 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 CTSEP14091 401 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 SDC2P34741 201 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 SRP14P37108 136 aaKnown RBP2.33□□□□□ -2.04
PTPRK-220ENST00000531466 FOXA1P55317 472 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 GFERP55789 205 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 RPS23P62266 143 aaKnown RBP2.33□□□□□ -2.04
PTPRK-220ENST00000531466 RPS11P62280 158 aaKnown RBP eCLIP2.33□□□□□ -2.04
PTPRK-220ENST00000531466 AKR1C1Q04828 323 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 ALKAL2Q6UX46 152 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 KTN1-AS1Q86SY8 53 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 LHFPL1Q86WI0 220 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 ATOH7Q8N100 152 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 C10orf126Q8N4M7 172 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 ZDHHC22Q8N966 263 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 LINC01555Q8NAE3 123 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 OR5D16Q8NGK9 328 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 OR2A12Q8NGT7 310 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 OR2T27Q8NH04 317 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 OR4K13Q8NH42 304 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 ATP6V0E2Q8NHE4 81 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 SGMS2Q8NHU3 365 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 SLC25A40Q8TBP6 338 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 MRPL30Q8TCC3 161 aaKnown RBP2.33□□□□□ -2.04
PTPRK-220ENST00000531466 TWIST2Q8WVJ9 160 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 C10orf82Q8WW14 230 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 MS4A6EQ96DS6 147 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 PGLYRP4Q96LB8 373 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 C2orf50Q96LR7 162 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 YPEL4Q96NS1 127 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 OR2A5Q96R48 311 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 HIST1H2BLQ99880 126 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 TBL1YQ9BQ87 522 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 SRXN1Q9BYN0 137 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 DEFB127Q9H1M4 99 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 ZNF226Q9NYT6 803 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 SPRR3Q9UBC9 169 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 CKLFQ9UBR5 152 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 LINC00527Q9UJ94 153 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 PCTPQ9UKL6 214 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 AMMECR1Q9Y4X0 333 aaPredicted RBP2.33□□□□□ -2.04
PTPRK-220ENST00000531466 NEUROG3Q9Y4Z2 214 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 V9GY05 133 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 CUL7Q14999 1698 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 PXDNLA1KZ92 1463 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 ADGRL1O94910 1474 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 NKTRP30414 1462 aaKnown RBP2.33□□□□□ -2.04
PTPRK-220ENST00000531466 ARHGAP5Q13017 1502 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 URB2Q14146 1524 aaKnown RBP2.32□□□□□ -2.04
PTPRK-220ENST00000531466 HECW2Q9P2P5 1572 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 CROCC2H7BZ55 1655 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 SIGLEC1Q9BZZ2 1709 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 TRAV9-1A0A075B6T8 112 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 IGKV1D-8A0A087WSZ0 117 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 TRAV27A0A087WT01 109 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 IGLV1-36A0A0B4J1U3 117 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 C3orf85A0A1B0GTC6 90 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 DPRXA6NFQ7 191 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 NDUFC2-KCTD14E9PQ53 114 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 H3BQ15 152 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 CCDC179H3BU77 68 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 K7EP34 96 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 GEMIN2O14893 280 aaKnown RBP2.32□□□□□ -2.04
PTPRK-220ENST00000531466 PSPHP1O15172 72 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 KLF7O75840 302 aaPredicted RBP2.32□□□□□ -2.04
PTPRK-220ENST00000531466 NDUFB2O95178 105 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 GYPAP02724 150 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 TRGC2P03986 189 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 CECR9P0C854 216 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 RBMY1CP0DJD4 496 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 CACNG7P62955 275 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 ZNF90Q03938 601 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 ZNF141Q15928 474 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 PRR4Q16378 134 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 FBXL19-AS1Q494R0 122 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 UBE2NLQ5JXB2 153 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 C9orf153Q5TBE3 101 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 LINC01545Q5VT33 79 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 Q6AWC8 147 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 LCN12Q6JVE5 192 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 ACP7Q6ZNF0 438 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 TEX43Q6ZNM6 134 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 Q6ZS92 163 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 Q6ZUT4 128 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 ZNF429Q86V71 674 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 RPS19BP1Q86WX3 136 aaKnown RBP2.32□□□□□ -2.04
PTPRK-220ENST00000531466 C1orf174Q8IYL3 243 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 ZFP41Q8N8Y5 198 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 LINC00301Q8NCQ3 95 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms