RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 SPINK9Q5DT21 86 aa16.51■□□□□ 0.23
TRAPPC4-210ENST00000531290 DUSP18Q8NEJ0 188 aa16.51■□□□□ 0.23
TRAPPC4-210ENST00000531290 EPPK1P58107 5090 aaKnown RBP16.51■□□□□ 0.23
TRAPPC4-210ENST00000531290 TFPI2P48307 235 aa16.5■□□□□ 0.23
TRAPPC4-210ENST00000531290 INPP1P49441 399 aa16.5■□□□□ 0.23
TRAPPC4-210ENST00000531290 LYG2Q86SG7 212 aa16.5■□□□□ 0.23
TRAPPC4-210ENST00000531290 CCDC190Q86UF4 302 aa16.5■□□□□ 0.23
TRAPPC4-210ENST00000531290 SLC35G3Q8N808 338 aa16.5■□□□□ 0.23
TRAPPC4-210ENST00000531290 GINS3Q9BRX5 216 aa16.5■□□□□ 0.23
TRAPPC4-210ENST00000531290 RTBDNQ9BSG5 229 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC4-210ENST00000531290 PDCD10Q9BUL8 212 aa16.5■□□□□ 0.23
TRAPPC4-210ENST00000531290 GPR132Q9UNW8 380 aa16.5■□□□□ 0.23
TRAPPC4-210ENST00000531290 KCNIP3Q9Y2W7 256 aa16.5■□□□□ 0.23
TRAPPC4-210ENST00000531290 V9GYH0 126 aa16.5■□□□□ 0.23
TRAPPC4-210ENST00000531290 HYDINQ4G0P3 5121 aa16.49■□□□□ 0.23
TRAPPC4-210ENST00000531290 IGKV3-7A0A075B6H7 116 aa16.49■□□□□ 0.23
TRAPPC4-210ENST00000531290 A0A0B4J293 547 aa16.49■□□□□ 0.23
TRAPPC4-210ENST00000531290 IGKV1-5P01602 117 aa16.49■□□□□ 0.23
TRAPPC4-210ENST00000531290 SUB1P53999 127 aaKnown RBP eCLIP16.49■□□□□ 0.231e-9■■■■■ 65.6
TRAPPC4-210ENST00000531290 PAFAH1B2P68402 229 aa16.49■□□□□ 0.23
TRAPPC4-210ENST00000531290 DHODHQ02127 395 aa16.49■□□□□ 0.23
TRAPPC4-210ENST00000531290 TNFRSF9Q07011 255 aa16.49■□□□□ 0.23
TRAPPC4-210ENST00000531290 PMS2P11Q13670 270 aa16.49■□□□□ 0.23
TRAPPC4-210ENST00000531290 APRG1Q8IVJ8 170 aa16.49■□□□□ 0.23
TRAPPC4-210ENST00000531290 RNF183Q96D59 192 aa16.49■□□□□ 0.23
TRAPPC4-210ENST00000531290 NAA60Q9H7X0 242 aa16.49■□□□□ 0.23
TRAPPC4-210ENST00000531290 IGHV3OR16-13A0A075B7E8 117 aa16.48■□□□□ 0.23
TRAPPC4-210ENST00000531290 IGHV3-74A0A0B4J1X5 117 aa16.48■□□□□ 0.23
TRAPPC4-210ENST00000531290 UCP1P25874 307 aa16.48■□□□□ 0.23
TRAPPC4-210ENST00000531290 ZNF414Q96IQ9 312 aa16.48■□□□□ 0.23
TRAPPC4-210ENST00000531290 MAP6D1Q9H9H5 199 aa16.48■□□□□ 0.23
TRAPPC4-210ENST00000531290 ST8SIA3O43173 380 aa16.47■□□□□ 0.23
TRAPPC4-210ENST00000531290 CD5P06127 495 aa16.47■□□□□ 0.23
TRAPPC4-210ENST00000531290 OR5AC1P0C628 307 aa16.47■□□□□ 0.23
TRAPPC4-210ENST00000531290 ETV6P41212 452 aa16.47■□□□□ 0.23
TRAPPC4-210ENST00000531290 TOMM20LQ6UXN7 152 aa16.47■□□□□ 0.23
TRAPPC4-210ENST00000531290 GBGT1Q8N5D6 347 aa16.47■□□□□ 0.23
TRAPPC4-210ENST00000531290 TMEM217Q8N7C4 229 aa16.47■□□□□ 0.23
TRAPPC4-210ENST00000531290 DEDD2Q8WXF8 326 aa16.47■□□□□ 0.23
TRAPPC4-210ENST00000531290 TMEM222Q9H0R3 208 aa16.47■□□□□ 0.23
TRAPPC4-210ENST00000531290 ENY2Q9NPA8 101 aa16.47■□□□□ 0.23
TRAPPC4-210ENST00000531290 INS-IGF2F8WCM5 200 aa16.46■□□□□ 0.23
TRAPPC4-210ENST00000531290 KLF9Q13886 244 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC4-210ENST00000531290 ZNF79Q15937 498 aa16.46■□□□□ 0.23
TRAPPC4-210ENST00000531290 TCF24Q7RTU0 167 aa16.46■□□□□ 0.23
TRAPPC4-210ENST00000531290 CSTL1Q9H114 145 aa16.46■□□□□ 0.23
TRAPPC4-210ENST00000531290 NUPR2A6NF83 97 aa16.45■□□□□ 0.22
TRAPPC4-210ENST00000531290 CRYM-AS1A6NIL9 109 aa16.45■□□□□ 0.22
TRAPPC4-210ENST00000531290 CORTO00230 105 aa16.45■□□□□ 0.22
TRAPPC4-210ENST00000531290 P0C879 139 aa16.45■□□□□ 0.22
TRAPPC4-210ENST00000531290 HOXA1P49639 335 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC4-210ENST00000531290 FAM90A2PQ658T7 463 aa16.45■□□□□ 0.22
TRAPPC4-210ENST00000531290 ZNF600Q6ZNG1 722 aa16.45■□□□□ 0.22
TRAPPC4-210ENST00000531290 FAM219AQ8IW50 185 aa16.45■□□□□ 0.22
TRAPPC4-210ENST00000531290 RBPMSQ93062 196 aaKnown RBP16.45■□□□□ 0.22
TRAPPC4-210ENST00000531290 TRIM63Q969Q1 353 aa16.45■□□□□ 0.22
TRAPPC4-210ENST00000531290 PUS1Q9Y606 427 aaKnown RBP eCLIP16.45■□□□□ 0.22
TRAPPC4-210ENST00000531290 ALMS1Q8TCU4 4167 aa16.44■□□□□ 0.22
TRAPPC4-210ENST00000531290 MPTX1A8MV57 137 aa16.44■□□□□ 0.22
TRAPPC4-210ENST00000531290 CDS2O95674 445 aa16.44■□□□□ 0.22
TRAPPC4-210ENST00000531290 TMEM50AO95807 157 aa16.44■□□□□ 0.22
TRAPPC4-210ENST00000531290 ANXA3P12429 323 aa16.44■□□□□ 0.22
TRAPPC4-210ENST00000531290 AKR1C4P17516 323 aa16.44■□□□□ 0.22
TRAPPC4-210ENST00000531290 RPL11P62913 178 aaKnown RBP16.44■□□□□ 0.22
TRAPPC4-210ENST00000531290 EWSR1Q01844 656 aaKnown RBP eCLIP16.44■□□□□ 0.22
TRAPPC4-210ENST00000531290 TRIQKQ629K1 86 aa16.44■□□□□ 0.22
TRAPPC4-210ENST00000531290 GLYATL2Q8WU03 294 aa16.44■□□□□ 0.22
TRAPPC4-210ENST00000531290 PIGBOS1A0A0B4J2F0 54 aa16.43■□□□□ 0.22
TRAPPC4-210ENST00000531290 DNASE2O00115 360 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC4-210ENST00000531290 ATF4P18848 351 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC4-210ENST00000531290 ZNF124Q15973 351 aa16.43■□□□□ 0.22
TRAPPC4-210ENST00000531290 TMEM268Q5VZI3 342 aa16.43■□□□□ 0.22
TRAPPC4-210ENST00000531290 CEMP1Q6PRD7 247 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC4-210ENST00000531290 ST8SIA2Q92186 375 aa16.43■□□□□ 0.22
TRAPPC4-210ENST00000531290 TMEM231Q9H6L2 316 aa16.43■□□□□ 0.22
TRAPPC4-210ENST00000531290 IGHV3-66A0A0C4DH42 116 aa16.42■□□□□ 0.22
TRAPPC4-210ENST00000531290 SCGB2A1O75556 95 aa16.42■□□□□ 0.22
TRAPPC4-210ENST00000531290 RNASE2P10153 161 aaKnown RBP16.42■□□□□ 0.22
TRAPPC4-210ENST00000531290 PVRIGQ6DKI7 326 aa16.42■□□□□ 0.22
TRAPPC4-210ENST00000531290 SLC25A21Q9BQT8 299 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC4-210ENST00000531290 SRRQ9GZT4 340 aa16.42■□□□□ 0.22
TRAPPC4-210ENST00000531290 VSIRQ9H7M9 311 aa16.42■□□□□ 0.22
TRAPPC4-210ENST00000531290 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC4-210ENST00000531290 KLK5Q9Y337 293 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC4-210ENST00000531290 BIRC6Q9NR09 4857 aa16.42■□□□□ 0.22
TRAPPC4-210ENST00000531290 DFFBO76075 338 aa16.41■□□□□ 0.22
TRAPPC4-210ENST00000531290 LY6G6CO95867 125 aa16.41■□□□□ 0.22
TRAPPC4-210ENST00000531290 APOHP02749 345 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC4-210ENST00000531290 NPPCP23582 126 aa16.41■□□□□ 0.22
TRAPPC4-210ENST00000531290 OPRK1P41145 380 aa16.41■□□□□ 0.22
TRAPPC4-210ENST00000531290 SRPXP78539 464 aa16.41■□□□□ 0.22
TRAPPC4-210ENST00000531290 TMED4Q7Z7H5 227 aa16.41■□□□□ 0.22
TRAPPC4-210ENST00000531290 LINC00476Q8WZB0 136 aa16.41■□□□□ 0.22
TRAPPC4-210ENST00000531290 MS4A6AQ9H2W1 248 aa16.41■□□□□ 0.22
TRAPPC4-210ENST00000531290 CACFD1Q9UGQ2 172 aa16.41■□□□□ 0.22
TRAPPC4-210ENST00000531290 A0A1B0GU03 582 aa16.4■□□□□ 0.22
TRAPPC4-210ENST00000531290 A0A1W2PS18 150 aa16.4■□□□□ 0.22
TRAPPC4-210ENST00000531290 SPCS3P61009 180 aa16.4■□□□□ 0.22
TRAPPC4-210ENST00000531290 SELENOHQ8IZQ5 122 aaKnown RBP16.4■□□□□ 0.22
TRAPPC4-210ENST00000531290 LILRB2Q8N423 598 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms