RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 ADMP35318 185 aa16.33■□□□□ 0.2
CAPN1-220ENST00000530567 MFAP4P55083 255 aa16.33■□□□□ 0.2
CAPN1-220ENST00000530567 RAB32Q13637 225 aa16.33■□□□□ 0.2
CAPN1-220ENST00000530567 KLF5Q13887 457 aaPredicted RBP16.33■□□□□ 0.2
CAPN1-220ENST00000530567 SPANXN5Q5MJ07 72 aa16.33■□□□□ 0.2
CAPN1-220ENST00000530567 CHRDL1Q9BU40 450 aa16.33■□□□□ 0.2
CAPN1-220ENST00000530567 NMES1Q9C002 83 aa16.33■□□□□ 0.2
CAPN1-220ENST00000530567 PRSS46E5RG02 174 aa16.32■□□□□ 0.2
CAPN1-220ENST00000530567 OR2C1O95371 312 aa16.32■□□□□ 0.2
CAPN1-220ENST00000530567 CXCL3P19876 107 aa16.32■□□□□ 0.2
CAPN1-220ENST00000530567 TAS2R30P59541 319 aa16.32■□□□□ 0.2
CAPN1-220ENST00000530567 RPEL1Q2QD12 228 aa16.32■□□□□ 0.2
CAPN1-220ENST00000530567 Q56UQ5 140 aa16.32■□□□□ 0.2
CAPN1-220ENST00000530567 UBAC2Q8NBM4 344 aa16.32■□□□□ 0.2
CAPN1-220ENST00000530567 BSCL2Q96G97 398 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-220ENST00000530567 TXN2Q99757 166 aa16.32■□□□□ 0.2
CAPN1-220ENST00000530567 PSENENQ9NZ42 101 aa16.32■□□□□ 0.2
CAPN1-220ENST00000530567 LSM5Q9Y4Y9 91 aaKnown RBP16.32■□□□□ 0.2
CAPN1-220ENST00000530567 IFNA4P05014 189 aa16.31■□□□□ 0.2
CAPN1-220ENST00000530567 CTSGP08311 255 aa16.31■□□□□ 0.2
CAPN1-220ENST00000530567 SYNJ2BPP57105 145 aa16.31■□□□□ 0.2
CAPN1-220ENST00000530567 CD69Q07108 199 aa16.31■□□□□ 0.2
CAPN1-220ENST00000530567 FCN2Q15485 313 aa16.31■□□□□ 0.2
CAPN1-220ENST00000530567 ACSM6Q6P461 480 aa16.31■□□□□ 0.2
CAPN1-220ENST00000530567 PRSS54Q6PEW0 395 aa16.31■□□□□ 0.2
CAPN1-220ENST00000530567 STRAPQ9Y3F4 350 aaKnown RBP16.31■□□□□ 0.2
CAPN1-220ENST00000530567 RPS10-NUDT3A0A1W2PQS6 291 aa16.3■□□□□ 0.2
CAPN1-220ENST00000530567 OVOL1O14753 267 aa16.3■□□□□ 0.2
CAPN1-220ENST00000530567 TSC22D2O75157 780 aa16.3■□□□□ 0.2
CAPN1-220ENST00000530567 IGLL1P15814 213 aa16.3■□□□□ 0.2
CAPN1-220ENST00000530567 S100A10P60903 97 aa16.3■□□□□ 0.2
CAPN1-220ENST00000530567 RPP30P78346 268 aaKnown RBP16.3■□□□□ 0.2
CAPN1-220ENST00000530567 SPSB3Q6PJ21 355 aa16.3■□□□□ 0.2
CAPN1-220ENST00000530567 TMEM14EPQ6UXP3 125 aa16.3■□□□□ 0.2
CAPN1-220ENST00000530567 SLC16A13Q7RTY0 426 aa16.3■□□□□ 0.2
CAPN1-220ENST00000530567 OR11H7Q8NGC8 314 aa16.3■□□□□ 0.2
CAPN1-220ENST00000530567 OR4X1Q8NH49 305 aa16.3■□□□□ 0.2
CAPN1-220ENST00000530567 PMS2P5A8MQ11 134 aa16.29■□□□□ 0.2
CAPN1-220ENST00000530567 SLC25A4P12235 298 aa16.29■□□□□ 0.2
CAPN1-220ENST00000530567 NPBWR1P48145 328 aa16.29■□□□□ 0.2
CAPN1-220ENST00000530567 RAB11AP62491 216 aa16.29■□□□□ 0.2
CAPN1-220ENST00000530567 GPHB5Q86YW7 130 aa16.29■□□□□ 0.2
CAPN1-220ENST00000530567 C1QL4Q86Z23 238 aa16.29■□□□□ 0.2
CAPN1-220ENST00000530567 RCC1LQ96I51 464 aaKnown RBP16.29■□□□□ 0.2
CAPN1-220ENST00000530567 MED28Q9H204 178 aa16.29■□□□□ 0.2
CAPN1-220ENST00000530567 GAR1Q9NY12 217 aaKnown RBP16.29■□□□□ 0.2
CAPN1-220ENST00000530567 PAIP2BQ9ULR5 123 aaKnown RBP16.29■□□□□ 0.2
CAPN1-220ENST00000530567 IGHV3-35A0A0C4DH35 117 aa16.28■□□□□ 0.2
CAPN1-220ENST00000530567 CLN5O75503 358 aa16.28■□□□□ 0.2
CAPN1-220ENST00000530567 CCNKO75909 580 aa16.28■□□□□ 0.2
CAPN1-220ENST00000530567 CYCSP99999 105 aaKnown RBP16.28■□□□□ 0.2
CAPN1-220ENST00000530567 TMEM116Q8NCL8 245 aa16.28■□□□□ 0.2
CAPN1-220ENST00000530567 ZNF436Q9C0F3 470 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-220ENST00000530567 H0YIZ8 118 aa16.28■□□□□ 0.2
CAPN1-220ENST00000530567 GNG7O60262 68 aa16.28■□□□□ 0.2
CAPN1-220ENST00000530567 DEDDO75618 318 aa16.28■□□□□ 0.2
CAPN1-220ENST00000530567 GPX4P36969 197 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-220ENST00000530567 RND2P52198 227 aa16.28■□□□□ 0.2
CAPN1-220ENST00000530567 RRAS2P62070 204 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-220ENST00000530567 ETFRF1Q6IPR1 90 aa16.28■□□□□ 0.2
CAPN1-220ENST00000530567 UNQ9165/PRO28630Q6UXU0 137 aa16.28■□□□□ 0.2
CAPN1-220ENST00000530567 L7N2F9 121 aa16.27■□□□□ 0.19
CAPN1-220ENST00000530567 NUPL2O15504 423 aaKnown RBP16.27■□□□□ 0.19
CAPN1-220ENST00000530567 METTL15P1P0C7V9 234 aa16.27■□□□□ 0.19
CAPN1-220ENST00000530567 VAMP2P63027 116 aa16.27■□□□□ 0.19
CAPN1-220ENST00000530567 LRRC37A5PQ49AS3 106 aa16.27■□□□□ 0.19
CAPN1-220ENST00000530567 OXLD1Q5BKU9 147 aa16.27■□□□□ 0.19
CAPN1-220ENST00000530567 SAMD5Q5TGI4 173 aa16.27■□□□□ 0.19
CAPN1-220ENST00000530567 IL34Q6ZMJ4 242 aa16.27■□□□□ 0.19
CAPN1-220ENST00000530567 REC114Q7Z4M0 266 aa16.27■□□□□ 0.19
CAPN1-220ENST00000530567 OR9G4Q8NGQ1 327 aa16.27■□□□□ 0.19
CAPN1-220ENST00000530567 PPP1R1CQ8WVI7 109 aa16.27■□□□□ 0.19
CAPN1-220ENST00000530567 CACNG8Q8WXS5 425 aa16.27■□□□□ 0.19
CAPN1-220ENST00000530567 G3V4G9 280 aa16.26■□□□□ 0.19
CAPN1-220ENST00000530567 LGALS9O00182 355 aa16.26■□□□□ 0.19
CAPN1-220ENST00000530567 IGKV1-17P01599 117 aa16.26■□□□□ 0.19
CAPN1-220ENST00000530567 IGLC1P0CG04 106 aa16.26■□□□□ 0.19
CAPN1-220ENST00000530567 HAPLN4Q86UW8 402 aa16.26■□□□□ 0.19
CAPN1-220ENST00000530567 NPIPB3Q92617 1050 aa16.26■□□□□ 0.19
CAPN1-220ENST00000530567 MCRIP2Q9BUT9 160 aaKnown RBP16.26■□□□□ 0.19
CAPN1-220ENST00000530567 SEC14L6B5MCN3 397 aa16.25■□□□□ 0.19
CAPN1-220ENST00000530567 ARL16Q0P5N6 197 aa16.25■□□□□ 0.19
CAPN1-220ENST00000530567 GAMTQ14353 236 aa16.25■□□□□ 0.19
CAPN1-220ENST00000530567 TMEM190Q8WZ59 177 aa16.25■□□□□ 0.19
CAPN1-220ENST00000530567 ACY3Q96HD9 319 aa16.25■□□□□ 0.19
CAPN1-220ENST00000530567 OR5AC2Q9NZP5 309 aa16.25■□□□□ 0.19
CAPN1-220ENST00000530567 NBEAL1Q6ZS30 2694 aa16.25■□□□□ 0.19
CAPN1-220ENST00000530567 FAM24AA6NFZ4 105 aa16.24■□□□□ 0.19
CAPN1-220ENST00000530567 A8MWP6 167 aa16.24■□□□□ 0.19
CAPN1-220ENST00000530567 PVALBP20472 110 aaPredicted RBP16.24■□□□□ 0.19
CAPN1-220ENST00000530567 OR8G2PQ6IF36 304 aa16.24■□□□□ 0.19
CAPN1-220ENST00000530567 ACOT7LQ6ZUV0 252 aa16.24■□□□□ 0.19
CAPN1-220ENST00000530567 RNF126Q9BV68 326 aa16.24■□□□□ 0.19
CAPN1-220ENST00000530567 LYRM2Q9NU23 88 aaPredicted RBP16.24■□□□□ 0.19
CAPN1-220ENST00000530567 NOTCH1P46531 2555 aa16.24■□□□□ 0.19
CAPN1-220ENST00000530567 TMEM213A2RRL7 107 aa16.23■□□□□ 0.19
CAPN1-220ENST00000530567 NDUFA4O00483 81 aa16.23■□□□□ 0.19
CAPN1-220ENST00000530567 WIPF1O43516 503 aa16.23■□□□□ 0.19
CAPN1-220ENST00000530567 MPC2O95563 127 aa16.23■□□□□ 0.19
CAPN1-220ENST00000530567 CSN3P07498 182 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms