RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	APLN	Q9ULZ1	77 aa		11.34	□□□□□ -0.59
TM9SF1-209	ENST00000530468	HERC2	O95714	4834 aa		11.34	□□□□□ -0.59
TM9SF1-209	ENST00000530468		K7EQG2	157 aa		11.33	□□□□□ -0.6
TM9SF1-209	ENST00000530468		M0QYG6	137 aa		11.33	□□□□□ -0.6
TM9SF1-209	ENST00000530468	CLN5	O75503	358 aa		11.33	□□□□□ -0.6
TM9SF1-209	ENST00000530468	RNASE2	P10153	161 aa	Known RBP	11.33	□□□□□ -0.6
TM9SF1-209	ENST00000530468	CRYBB3	P26998	211 aa		11.33	□□□□□ -0.6
TM9SF1-209	ENST00000530468	OPRK1	P41145	380 aa		11.33	□□□□□ -0.6
TM9SF1-209	ENST00000530468	PIGP	P57054	158 aa		11.33	□□□□□ -0.6
TM9SF1-209	ENST00000530468	CENPS	Q8N2Z9	138 aa		11.33	□□□□□ -0.6
TM9SF1-209	ENST00000530468	STXBP6	Q8NFX7	210 aa		11.33	□□□□□ -0.6
TM9SF1-209	ENST00000530468	OR4X1	Q8NH49	305 aa		11.33	□□□□□ -0.6
TM9SF1-209	ENST00000530468	TP53RK	Q96S44	253 aa		11.33	□□□□□ -0.6
TM9SF1-209	ENST00000530468	ENY2	Q9NPA8	101 aa		11.33	□□□□□ -0.6
TM9SF1-209	ENST00000530468	DNAH10	Q8IVF4	4471 aa		11.33	□□□□□ -0.6
TM9SF1-209	ENST00000530468	IGHV4-28	A0A0C4DH34	117 aa		11.32	□□□□□ -0.6
TM9SF1-209	ENST00000530468	C3orf85	A0A1B0GTC6	90 aa		11.32	□□□□□ -0.6
TM9SF1-209	ENST00000530468	GIG44	P09565	113 aa	Predicted RBP	11.32	□□□□□ -0.6
TM9SF1-209	ENST00000530468	RPL5	P46777	297 aa	Known RBP	11.32	□□□□□ -0.6
TM9SF1-209	ENST00000530468	P2RY1	P47900	373 aa		11.32	□□□□□ -0.6
TM9SF1-209	ENST00000530468	RNASE10	Q5GAN6	216 aa	Known RBP	11.32	□□□□□ -0.6
TM9SF1-209	ENST00000530468	LHFPL1	Q86WI0	220 aa		11.32	□□□□□ -0.6
TM9SF1-209	ENST00000530468	ARRDC1	Q8N5I2	433 aa		11.32	□□□□□ -0.6
TM9SF1-209	ENST00000530468	TMEM230	Q96A57	120 aa		11.32	□□□□□ -0.6
TM9SF1-209	ENST00000530468	TRAV30	A0A087WSZ9	112 aa		11.31	□□□□□ -0.6
TM9SF1-209	ENST00000530468	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.31	□□□□□ -0.6
TM9SF1-209	ENST00000530468	B3GALNT1	O75752	331 aa		11.31	□□□□□ -0.6
TM9SF1-209	ENST00000530468	RBMY1A1	P0DJD3	496 aa	Known RBP	11.31	□□□□□ -0.6
TM9SF1-209	ENST00000530468	RBMY1C	P0DJD4	496 aa		11.31	□□□□□ -0.6
TM9SF1-209	ENST00000530468	ELK1	P19419	428 aa		11.31	□□□□□ -0.6
TM9SF1-209	ENST00000530468	PI3	P19957	117 aa		11.31	□□□□□ -0.6
TM9SF1-209	ENST00000530468	TBP	P20226	339 aa		11.31	□□□□□ -0.6
TM9SF1-209	ENST00000530468	EIF2B2	P49770	351 aa	Known RBP	11.31	□□□□□ -0.6
TM9SF1-209	ENST00000530468	RBMY1F	Q15415	496 aa	Known RBP	11.31	□□□□□ -0.6
TM9SF1-209	ENST00000530468	DCANP1	Q8TF63	244 aa		11.31	□□□□□ -0.6
TM9SF1-209	ENST00000530468	RRNAD1	Q96FB5	475 aa	Known RBP	11.31	□□□□□ -0.6
TM9SF1-209	ENST00000530468	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.31	□□□□□ -0.6
TM9SF1-209	ENST00000530468	TRAV10	A0A0B4J240	114 aa		11.3	□□□□□ -0.6
TM9SF1-209	ENST00000530468	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.3	□□□□□ -0.6
TM9SF1-209	ENST00000530468	HPGDS	O60760	199 aa		11.3	□□□□□ -0.6
TM9SF1-209	ENST00000530468	ZNF688	P0C7X2	276 aa		11.3	□□□□□ -0.6
TM9SF1-209	ENST00000530468	HLA-DMB	P28068	263 aa		11.3	□□□□□ -0.6
TM9SF1-209	ENST00000530468	ETV6	P41212	452 aa		11.3	□□□□□ -0.6
TM9SF1-209	ENST00000530468	PPP5C	P53041	499 aa		11.3	□□□□□ -0.6
TM9SF1-209	ENST00000530468	TRIM16L	Q309B1	348 aa		11.3	□□□□□ -0.6
TM9SF1-209	ENST00000530468	BSX	Q3C1V8	233 aa		11.3	□□□□□ -0.6
TM9SF1-209	ENST00000530468	CCDC71L	Q8N9Z2	235 aa		11.3	□□□□□ -0.6
TM9SF1-209	ENST00000530468	ZFAND1	Q8TCF1	268 aa		11.3	□□□□□ -0.6
TM9SF1-209	ENST00000530468	MRPL36	Q9P0J6	103 aa	Known RBP	11.3	□□□□□ -0.6
TM9SF1-209	ENST00000530468	COPZ2	Q9P299	210 aa		11.3	□□□□□ -0.6
TM9SF1-209	ENST00000530468	HELT	A6NFD8	242 aa		11.29	□□□□□ -0.6
TM9SF1-209	ENST00000530468	KNCN	A6PVL3	124 aa		11.29	□□□□□ -0.6
TM9SF1-209	ENST00000530468	IGKV1-17	P01599	117 aa		11.29	□□□□□ -0.6
TM9SF1-209	ENST00000530468	CD3D	P04234	171 aa		11.29	□□□□□ -0.6
TM9SF1-209	ENST00000530468	C4BPB	P20851	252 aa		11.29	□□□□□ -0.6
TM9SF1-209	ENST00000530468	UCP1	P25874	307 aa		11.29	□□□□□ -0.6
TM9SF1-209	ENST00000530468	NCS1	P62166	190 aa		11.29	□□□□□ -0.6
TM9SF1-209	ENST00000530468	MZT2A	Q6P582	158 aa		11.29	□□□□□ -0.6
TM9SF1-209	ENST00000530468	RNASE11	Q8TAA1	199 aa	Known RBP	11.29	□□□□□ -0.6
TM9SF1-209	ENST00000530468	KLK11	Q9UBX7	282 aa		11.29	□□□□□ -0.6
TM9SF1-209	ENST00000530468	TBC1D24	Q9ULP9	559 aa		11.29	□□□□□ -0.6
TM9SF1-209	ENST00000530468		X6R8D5	127 aa		11.29	□□□□□ -0.6
TM9SF1-209	ENST00000530468	VPS13D	Q5THJ4	4388 aa		11.28	□□□□□ -0.6
TM9SF1-209	ENST00000530468	FAM25A	B3EWG3	89 aa		11.28	□□□□□ -0.6
TM9SF1-209	ENST00000530468	FAM25C	B3EWG5	89 aa		11.28	□□□□□ -0.6
TM9SF1-209	ENST00000530468	FAM25G	B3EWG6	89 aa		11.28	□□□□□ -0.6
TM9SF1-209	ENST00000530468	HTR2B	P41595	481 aa		11.28	□□□□□ -0.6
TM9SF1-209	ENST00000530468	RORC	P51449	518 aa		11.28	□□□□□ -0.6
TM9SF1-209	ENST00000530468	AP2S1	P53680	142 aa	Predicted RBP	11.28	□□□□□ -0.6
TM9SF1-209	ENST00000530468	SPCS3	P61009	180 aa		11.28	□□□□□ -0.6
TM9SF1-209	ENST00000530468	VBP1	P61758	197 aa		11.28	□□□□□ -0.6
TM9SF1-209	ENST00000530468	MLANA	Q16655	118 aa		11.28	□□□□□ -0.6
TM9SF1-209	ENST00000530468	TIGIT	Q495A1	244 aa		11.28	□□□□□ -0.6
TM9SF1-209	ENST00000530468	AARD	Q4LEZ3	155 aa		11.28	□□□□□ -0.6
TM9SF1-209	ENST00000530468	ACTL10	Q5JWF8	245 aa		11.28	□□□□□ -0.6
TM9SF1-209	ENST00000530468		Q6ZTC4	211 aa		11.28	□□□□□ -0.6
TM9SF1-209	ENST00000530468	FAM219A	Q8IW50	185 aa		11.28	□□□□□ -0.6
TM9SF1-209	ENST00000530468	OR1S2	Q8NGQ3	325 aa		11.28	□□□□□ -0.6
TM9SF1-209	ENST00000530468	OR52E5	Q8NH55	327 aa		11.28	□□□□□ -0.6
TM9SF1-209	ENST00000530468	TERB2	Q8NHR7	220 aa		11.28	□□□□□ -0.6
TM9SF1-209	ENST00000530468	RNF126	Q9BV68	326 aa		11.28	□□□□□ -0.6
TM9SF1-209	ENST00000530468	FUNDC2	Q9BWH2	189 aa		11.28	□□□□□ -0.6
TM9SF1-209	ENST00000530468	MTFP1	Q9UDX5	166 aa		11.28	□□□□□ -0.6
TM9SF1-209	ENST00000530468		U3KQE9	123 aa		11.28	□□□□□ -0.6
TM9SF1-209	ENST00000530468	IGHV4-4	A0A075B6R2	117 aa		11.27	□□□□□ -0.61
TM9SF1-209	ENST00000530468	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.27	□□□□□ -0.61
TM9SF1-209	ENST00000530468		A0A0G2JRQ6	117 aa		11.27	□□□□□ -0.61
TM9SF1-209	ENST00000530468	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
TM9SF1-209	ENST00000530468	SLC25A4	P12235	298 aa		11.27	□□□□□ -0.61
TM9SF1-209	ENST00000530468	DHRS2	Q13268	280 aa		11.27	□□□□□ -0.61
TM9SF1-209	ENST00000530468	SP6	Q3SY56	376 aa		11.27	□□□□□ -0.61
TM9SF1-209	ENST00000530468	RNASE12	Q5GAN4	147 aa	Known RBP	11.27	□□□□□ -0.61
TM9SF1-209	ENST00000530468	LINC00336	Q6ZUF6	198 aa		11.27	□□□□□ -0.61
TM9SF1-209	ENST00000530468	CSNK1G2-AS1	Q8NCQ2	148 aa		11.27	□□□□□ -0.61
TM9SF1-209	ENST00000530468	OR52I2	Q8NH67	350 aa		11.27	□□□□□ -0.61
TM9SF1-209	ENST00000530468		Q8WTZ3	238 aa		11.27	□□□□□ -0.61
TM9SF1-209	ENST00000530468	MRPS26	Q9BYN8	205 aa	Known RBP	11.27	□□□□□ -0.61
TM9SF1-209	ENST00000530468	IGLC1	P0CG04	106 aa		11.26	□□□□□ -0.61
TM9SF1-209	ENST00000530468	YPEL3	P61236	119 aa	Predicted RBP	11.26	□□□□□ -0.61
TM9SF1-209	ENST00000530468	NUTF2	P61970	127 aa	Known RBP	11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms