RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 FNDC4Q9H6D8 234 aaPredicted RBP11.36□□□□□ -0.59
TTC39A-216ENST00000530004 RPRMQ9NS64 109 aa11.36□□□□□ -0.59
TTC39A-216ENST00000530004 MOB4Q9Y3A3 225 aa11.36□□□□□ -0.59
TTC39A-216ENST00000530004 MXRA5Q9NR99 2828 aa11.36□□□□□ -0.59
TTC39A-216ENST00000530004 CTRB1P17538 263 aa11.36□□□□□ -0.59
TTC39A-216ENST00000530004 TMEM41BQ5BJD5 291 aa11.36□□□□□ -0.59
TTC39A-216ENST00000530004 CTRB2Q6GPI1 263 aa11.36□□□□□ -0.59
TTC39A-216ENST00000530004 TMEM144Q7Z5S9 345 aa11.36□□□□□ -0.59
TTC39A-216ENST00000530004 C5orf56Q8N8D9 126 aa11.36□□□□□ -0.59
TTC39A-216ENST00000530004 OR2T6Q8NHC8 308 aa11.36□□□□□ -0.59
TTC39A-216ENST00000530004 LYPD6BQ8NI32 183 aa11.36□□□□□ -0.59
TTC39A-216ENST00000530004 HSPB9Q9BQS6 159 aa11.36□□□□□ -0.59
TTC39A-216ENST00000530004 GGTLC1Q9BX51 225 aa11.36□□□□□ -0.59
TTC39A-216ENST00000530004 WNT10AQ9GZT5 417 aa11.36□□□□□ -0.59
TTC39A-216ENST00000530004 CORTO00230 105 aa11.35□□□□□ -0.59
TTC39A-216ENST00000530004 TCF21O43680 179 aa11.35□□□□□ -0.59
TTC39A-216ENST00000530004 DEFA4P12838 97 aa11.35□□□□□ -0.59
TTC39A-216ENST00000530004 RAB2AP61019 212 aa11.35□□□□□ -0.59
TTC39A-216ENST00000530004 ACY3Q96HD9 319 aa11.35□□□□□ -0.59
TTC39A-216ENST00000530004 DMRT1Q9Y5R6 373 aa11.35□□□□□ -0.59
TTC39A-216ENST00000530004 A0A1B0GV50 99 aa11.34□□□□□ -0.59
TTC39A-216ENST00000530004 AGPAT2O15120 278 aa11.34□□□□□ -0.59
TTC39A-216ENST00000530004 TSPAN15O95858 294 aa11.34□□□□□ -0.59
TTC39A-216ENST00000530004 IGHV3-48P01763 117 aa11.34□□□□□ -0.59
TTC39A-216ENST00000530004 MBP02144 154 aa11.34□□□□□ -0.59
TTC39A-216ENST00000530004 RAB31Q13636 194 aa11.34□□□□□ -0.59
TTC39A-216ENST00000530004 ASPHD1Q5U4P2 390 aa11.34□□□□□ -0.59
TTC39A-216ENST00000530004 IL34Q6ZMJ4 242 aa11.34□□□□□ -0.59
TTC39A-216ENST00000530004 C16orf82Q7Z2V1 217 aa11.34□□□□□ -0.59
TTC39A-216ENST00000530004 PXMP4Q9Y6I8 212 aa11.34□□□□□ -0.59
TTC39A-216ENST00000530004 IGKV1OR2-108A0A075B7D4 117 aa11.33□□□□□ -0.59
TTC39A-216ENST00000530004 SH2D7A6NKC9 451 aaPredicted RBP11.33□□□□□ -0.59
TTC39A-216ENST00000530004 NUDT19A8MXV4 375 aa11.33□□□□□ -0.59
TTC39A-216ENST00000530004 H2AFB1P0C5Y9 115 aa11.33□□□□□ -0.59
TTC39A-216ENST00000530004 EGR2P11161 476 aaPredicted RBP11.33□□□□□ -0.59
TTC39A-216ENST00000530004 MIC13Q5XKP0 118 aa11.33□□□□□ -0.59
TTC39A-216ENST00000530004 ETFRF1Q6IPR1 90 aa11.33□□□□□ -0.59
TTC39A-216ENST00000530004 EIF4E3Q8N5X7 224 aaKnown RBP11.33□□□□□ -0.59
TTC39A-216ENST00000530004 KCNIP2Q9NS61 270 aa11.33□□□□□ -0.59
TTC39A-216ENST00000530004 RAB19A4D1S5 217 aa11.33□□□□□ -0.6
TTC39A-216ENST00000530004 NPIPB5A8MRT5 1133 aa11.33□□□□□ -0.6
TTC39A-216ENST00000530004 I3L521 148 aa11.33□□□□□ -0.6
TTC39A-216ENST00000530004 SOX15O60248 233 aa11.33□□□□□ -0.6
TTC39A-216ENST00000530004 CRYGCP07315 174 aa11.33□□□□□ -0.6
TTC39A-216ENST00000530004 RNASE1P07998 156 aaKnown RBP11.33□□□□□ -0.6
TTC39A-216ENST00000530004 ZNF726P1Q15940 193 aa11.33□□□□□ -0.6
TTC39A-216ENST00000530004 ACOT6Q3I5F7 207 aaPredicted RBP11.33□□□□□ -0.6
TTC39A-216ENST00000530004 LFNGQ8NES3 379 aa11.33□□□□□ -0.6
TTC39A-216ENST00000530004 OR10G4Q8NGN3 311 aa11.33□□□□□ -0.6
TTC39A-216ENST00000530004 OR10G9Q8NGN4 311 aa11.33□□□□□ -0.6
TTC39A-216ENST00000530004 OR10G7Q8NGN6 311 aa11.33□□□□□ -0.6
TTC39A-216ENST00000530004 OR1L6Q8NGR2 347 aa11.33□□□□□ -0.6
TTC39A-216ENST00000530004 SFT2D1Q8WV19 159 aa11.33□□□□□ -0.6
TTC39A-216ENST00000530004 RCC1LQ96I51 464 aaKnown RBP11.33□□□□□ -0.6
TTC39A-216ENST00000530004 MRPL36Q9P0J6 103 aaKnown RBP11.33□□□□□ -0.6
TTC39A-216ENST00000530004 CUBNO60494 3623 aa11.33□□□□□ -0.6
TTC39A-216ENST00000530004 IGHV3-21A0A0B4J1V1 117 aa11.32□□□□□ -0.6
TTC39A-216ENST00000530004 ANKRD34BA5PLL1 514 aa11.32□□□□□ -0.6
TTC39A-216ENST00000530004 MT-CO2P00403 227 aa11.32□□□□□ -0.6
TTC39A-216ENST00000530004 AMY1AP04745 511 aa11.32□□□□□ -0.6
TTC39A-216ENST00000530004 M6PRP20645 277 aa11.32□□□□□ -0.6
TTC39A-216ENST00000530004 OR10J1P30954 320 aa11.32□□□□□ -0.6
TTC39A-216ENST00000530004 RPL29P47914 159 aaKnown RBP11.32□□□□□ -0.6
TTC39A-216ENST00000530004 SPSB3Q6PJ21 355 aa11.32□□□□□ -0.6
TTC39A-216ENST00000530004 RPP25LQ8N5L8 163 aaKnown RBP11.32□□□□□ -0.6
TTC39A-216ENST00000530004 TTC9CQ8N5M4 171 aa11.32□□□□□ -0.6
TTC39A-216ENST00000530004 NPIPB3Q92617 1050 aa11.32□□□□□ -0.6
TTC39A-216ENST00000530004 M0QZK8 103 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 ATP6V0E1O15342 81 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 YIF1AO95070 293 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 RND2P52198 227 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 B2MP61769 119 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 GCSAMLQ5JQS6 135 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 SSX7Q7RTT5 188 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 LURAP1LQ8IV03 231 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 STPG3Q8N7X2 389 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 SGMS2Q8NHU3 365 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 SLC45A2Q9UMX9 530 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 FAM181BA6NEQ2 426 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 EIF3GO75821 320 aaKnown RBP eCLIP11.31□□□□□ -0.6
TTC39A-216ENST00000530004 HBE1P02100 147 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 PRR20EP86478 221 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 PRR20CP86479 221 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 PRR20DP86480 221 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 PRR20BP86481 221 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 PRR20AP86496 221 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 FAM122CQ6P4D5 195 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 LCN15Q6UWW0 184 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 THAP8Q8NA92 274 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 BPIFCQ8NFQ6 507 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 OR5T1Q8NG75 326 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 SLC25A22Q9H936 323 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 SLC39A9Q9NUM3 307 aa11.31□□□□□ -0.6
TTC39A-216ENST00000530004 I3L2K1 104 aa11.3□□□□□ -0.6
TTC39A-216ENST00000530004 TSPAN9O75954 239 aa11.3□□□□□ -0.6
TTC39A-216ENST00000530004 BLCAPP62952 87 aa11.3□□□□□ -0.6
TTC39A-216ENST00000530004 CCL20P78556 96 aa11.3□□□□□ -0.6
TTC39A-216ENST00000530004 SRSF3P84103 164 aaKnown RBP11.3□□□□□ -0.6
TTC39A-216ENST00000530004 ECSCRQ19T08 205 aa11.3□□□□□ -0.6
TTC39A-216ENST00000530004 TOR2AQ5JU69 321 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms