RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	PRTN3	P24158	256 aa		11.78	□□□□□ -0.52
NR1H3-231	ENST00000529540	ADM	P35318	185 aa		11.78	□□□□□ -0.52
NR1H3-231	ENST00000529540	LOXL3	P58215	753 aa		11.78	□□□□□ -0.52
NR1H3-231	ENST00000529540	CST9LP1	Q5W188	147 aa		11.78	□□□□□ -0.52
NR1H3-231	ENST00000529540	OR10G8	Q8NGN5	311 aa		11.78	□□□□□ -0.52
NR1H3-231	ENST00000529540	SGMS2	Q8NHU3	365 aa		11.78	□□□□□ -0.52
NR1H3-231	ENST00000529540	CMTM2	Q8TAZ6	248 aa		11.78	□□□□□ -0.52
NR1H3-231	ENST00000529540	TMEM186	Q96B77	213 aa		11.78	□□□□□ -0.52
NR1H3-231	ENST00000529540	CSMD2	Q7Z408	3487 aa		11.77	□□□□□ -0.52
NR1H3-231	ENST00000529540	DOCK11	Q5JSL3	2073 aa		11.77	□□□□□ -0.52
NR1H3-231	ENST00000529540	DSCAML1	Q8TD84	2053 aa		11.77	□□□□□ -0.52
NR1H3-231	ENST00000529540	MARCH11	A6NNE9	402 aa		11.77	□□□□□ -0.53
NR1H3-231	ENST00000529540	LINC00473	A8K010	186 aa		11.77	□□□□□ -0.53
NR1H3-231	ENST00000529540	PRSS46	E5RG02	174 aa		11.77	□□□□□ -0.53
NR1H3-231	ENST00000529540	TPPP2	P59282	170 aa		11.77	□□□□□ -0.53
NR1H3-231	ENST00000529540	UBE2G2	P60604	165 aa		11.77	□□□□□ -0.53
NR1H3-231	ENST00000529540	RPS16	P62249	146 aa	Known RBP	11.77	□□□□□ -0.53
NR1H3-231	ENST00000529540	ARF6	P62330	175 aa		11.77	□□□□□ -0.53
NR1H3-231	ENST00000529540	MORN2	Q502X0	79 aa		11.77	□□□□□ -0.53
NR1H3-231	ENST00000529540	PRAMEF5	Q5TYX0	476 aa		11.77	□□□□□ -0.53
NR1H3-231	ENST00000529540	CYB5R2	Q6BCY4	276 aa		11.77	□□□□□ -0.53
NR1H3-231	ENST00000529540	TEX43	Q6ZNM6	134 aa		11.77	□□□□□ -0.53
NR1H3-231	ENST00000529540	C11orf52	Q96A22	123 aa		11.77	□□□□□ -0.53
NR1H3-231	ENST00000529540	TMEM68	Q96MH6	324 aa		11.77	□□□□□ -0.53
NR1H3-231	ENST00000529540	DERL1	Q9BUN8	251 aa		11.77	□□□□□ -0.53
NR1H3-231	ENST00000529540	TMEM133	Q9H2Q1	129 aa		11.77	□□□□□ -0.53
NR1H3-231	ENST00000529540	IL36B	Q9NZH7	164 aa		11.77	□□□□□ -0.53
NR1H3-231	ENST00000529540	NUPR1	O60356	82 aa		11.76	□□□□□ -0.53
NR1H3-231	ENST00000529540	TOX4	O94842	621 aa		11.76	□□□□□ -0.53
NR1H3-231	ENST00000529540	OR9G9	P0C7N8	305 aa		11.76	□□□□□ -0.53
NR1H3-231	ENST00000529540	DEFA4	P12838	97 aa		11.76	□□□□□ -0.53
NR1H3-231	ENST00000529540	VDAC2	P45880	294 aa	Predicted RBP	11.76	□□□□□ -0.53
NR1H3-231	ENST00000529540	PAX8	Q06710	450 aa		11.76	□□□□□ -0.53
NR1H3-231	ENST00000529540	KIAA2026	Q5HYC2	2103 aa		11.76	□□□□□ -0.53
NR1H3-231	ENST00000529540	GCSAML	Q5JQS6	135 aa		11.76	□□□□□ -0.53
NR1H3-231	ENST00000529540	C11orf42	Q8N5U0	333 aa		11.76	□□□□□ -0.53
NR1H3-231	ENST00000529540	TEX29	Q8N6K0	151 aa		11.76	□□□□□ -0.53
NR1H3-231	ENST00000529540	GGTLC1	Q9BX51	225 aa		11.76	□□□□□ -0.53
NR1H3-231	ENST00000529540	LPAR2	Q9HBW0	351 aa		11.76	□□□□□ -0.53
NR1H3-231	ENST00000529540	PRRC2A	P48634	2157 aa	Known RBP	11.76	□□□□□ -0.53
NR1H3-231	ENST00000529540	TRBV20OR9-2	A0A075B6H5	130 aa		11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540		C9JCJ5	164 aa		11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	RBMXL2	O75526	392 aa	Known RBP	11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	ARL14EPL	P0DKL9	152 aa		11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	IGHV4-31	P0DP07	118 aa		11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	BTF3	P20290	206 aa	Known RBP	11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	PRRX1	P54821	245 aa		11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	LTC4S	Q16873	150 aa		11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	FAM53A	Q6NSI3	398 aa	Predicted RBP	11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	TREML4	Q6UXN2	200 aa		11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	OR9G1	Q8NH87	305 aa		11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	ZNF596	Q8TC21	504 aa		11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	TBX15	Q96SF7	602 aa		11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	MGST2	Q99735	147 aa		11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	CLEC7A	Q9BXN2	247 aa		11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	SIRPD	Q9H106	197 aa		11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	HIF1AN	Q9NWT6	349 aa		11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	TP53TG3	Q9ULZ0	132 aa		11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	TRBV9	A0A0B4J1U6	114 aa		11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	HPRT1	P00492	218 aa		11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	TGFA	P01135	160 aa		11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	ZNF705D	P0CH99	300 aa	Predicted RBP	11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	ZNF705B	P0CI00	300 aa	Predicted RBP	11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	RAN	P62826	216 aa	Known RBP	11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	SPINK9	Q5DT21	86 aa		11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	LINC00311	Q8N616	119 aa		11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	ARL2-SNX15	V9GYD0	113 aa		11.75	□□□□□ -0.53
NR1H3-231	ENST00000529540	PDZD2	O15018	2839 aa		11.74	□□□□□ -0.53
NR1H3-231	ENST00000529540	IGHV3-43	A0A0B4J1X8	118 aa		11.74	□□□□□ -0.53
NR1H3-231	ENST00000529540		A0A1B0GUS0	222 aa		11.74	□□□□□ -0.53
NR1H3-231	ENST00000529540	SCO2	A0A1W2PP80	73 aa		11.74	□□□□□ -0.53
NR1H3-231	ENST00000529540	IGHV3-43D	P0DP04	118 aa		11.74	□□□□□ -0.53
NR1H3-231	ENST00000529540	AREG	P15514	252 aa		11.74	□□□□□ -0.53
NR1H3-231	ENST00000529540	DUT	P33316	252 aa	Known RBP	11.74	□□□□□ -0.53
NR1H3-231	ENST00000529540	LINC00310	P59036	64 aa		11.74	□□□□□ -0.53
NR1H3-231	ENST00000529540		Q0VG73	95 aa		11.74	□□□□□ -0.53
NR1H3-231	ENST00000529540		Q6ZWC4	215 aa		11.74	□□□□□ -0.53
NR1H3-231	ENST00000529540	VMO1	Q7Z5L0	202 aa		11.74	□□□□□ -0.53
NR1H3-231	ENST00000529540	ABHD12	Q8N2K0	398 aa		11.74	□□□□□ -0.53
NR1H3-231	ENST00000529540	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	11.74	□□□□□ -0.53
NR1H3-231	ENST00000529540	ASH1L	Q9NR48	2969 aa	Known RBP	11.73	□□□□□ -0.53
NR1H3-231	ENST00000529540	IGHV2-26	A0A0B4J1V2	119 aa		11.73	□□□□□ -0.53
NR1H3-231	ENST00000529540	PGPEP1L	A6NFU8	196 aa		11.73	□□□□□ -0.53
NR1H3-231	ENST00000529540	MMP23A	O75900	390 aa		11.73	□□□□□ -0.53
NR1H3-231	ENST00000529540	GCHFR	P30047	84 aa		11.73	□□□□□ -0.53
NR1H3-231	ENST00000529540	LGALS4	P56470	323 aa		11.73	□□□□□ -0.53
NR1H3-231	ENST00000529540	TPTE2P1	Q5T6R2	138 aa		11.73	□□□□□ -0.53
NR1H3-231	ENST00000529540	SLC25A48	Q6ZT89	311 aa	Known RBP	11.73	□□□□□ -0.53
NR1H3-231	ENST00000529540	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11.73	□□□□□ -0.53
NR1H3-231	ENST00000529540	OR11H6	Q8NGC7	330 aa		11.73	□□□□□ -0.53
NR1H3-231	ENST00000529540	OCC1	Q8TAD7	63 aa		11.73	□□□□□ -0.53
NR1H3-231	ENST00000529540	MIEN1	Q9BRT3	115 aa		11.73	□□□□□ -0.53
NR1H3-231	ENST00000529540	ATG101	Q9BSB4	218 aa		11.73	□□□□□ -0.53
NR1H3-231	ENST00000529540	PPP1R14D	Q9NXH3	145 aa		11.73	□□□□□ -0.53
NR1H3-231	ENST00000529540	PSG11	Q9UQ72	335 aa		11.73	□□□□□ -0.53
NR1H3-231	ENST00000529540	LSM4	Q9Y4Z0	139 aa	Known RBP	11.73	□□□□□ -0.53
NR1H3-231	ENST00000529540	ITPR2	Q14571	2701 aa		11.73	□□□□□ -0.53
NR1H3-231	ENST00000529540		J3QR06	171 aa		11.72	□□□□□ -0.53

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