RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 GINS3Q9BRX5 216 aa8.97□□□□□ -0.97
COPB1-206ENST00000529210 C20orf24Q9BUV8 137 aa8.97□□□□□ -0.97
COPB1-206ENST00000529210 RHPN1-AS1Q9BWJ2 59 aa8.97□□□□□ -0.97
COPB1-206ENST00000529210 FNDC4Q9H6D8 234 aaPredicted RBP8.97□□□□□ -0.97
COPB1-206ENST00000529210 VSIRQ9H7M9 311 aa8.97□□□□□ -0.97
COPB1-206ENST00000529210 ZFAND3Q9H8U3 227 aa8.97□□□□□ -0.97
COPB1-206ENST00000529210 TRAV14DV4A0A0A6YYC5 116 aa8.96□□□□□ -0.98
COPB1-206ENST00000529210 KIR2DL5BA0A0G2JN68 375 aa8.96□□□□□ -0.98
COPB1-206ENST00000529210 KIR2DL5BA0A0G2JPC4 375 aa8.96□□□□□ -0.98
COPB1-206ENST00000529210 ZNF701M0R085 212 aaPredicted RBP8.96□□□□□ -0.98
COPB1-206ENST00000529210 CLN5O75503 358 aa8.96□□□□□ -0.98
COPB1-206ENST00000529210 HTR2BP41595 481 aa8.96□□□□□ -0.98
COPB1-206ENST00000529210 HOXA1P49639 335 aaPredicted RBP8.96□□□□□ -0.98
COPB1-206ENST00000529210 C2orf83Q53S99 150 aa8.96□□□□□ -0.98
COPB1-206ENST00000529210 SPINK9Q5DT21 86 aa8.96□□□□□ -0.98
COPB1-206ENST00000529210 TOMM20LQ6UXN7 152 aa8.96□□□□□ -0.98
COPB1-206ENST00000529210 WFDC3Q8IUB2 231 aa8.96□□□□□ -0.98
COPB1-206ENST00000529210 KIR2DL5AQ8N109 375 aa8.96□□□□□ -0.98
COPB1-206ENST00000529210 TMEM116Q8NCL8 245 aa8.96□□□□□ -0.98
COPB1-206ENST00000529210 KIR2DL5BQ8NHK3 375 aa8.96□□□□□ -0.98
COPB1-206ENST00000529210 IL17DQ8TAD2 202 aa8.96□□□□□ -0.98
COPB1-206ENST00000529210 PINX1Q96BK5 328 aaKnown RBP8.96□□□□□ -0.98
COPB1-206ENST00000529210 GPR146Q96CH1 333 aa8.96□□□□□ -0.98
COPB1-206ENST00000529210 RNF2Q99496 336 aa8.96□□□□□ -0.98
COPB1-206ENST00000529210 RBM38Q9H0Z9 239 aaKnown RBP8.96□□□□□ -0.98
COPB1-206ENST00000529210 RETNQ9HD89 108 aa8.96□□□□□ -0.98
COPB1-206ENST00000529210 ENY2Q9NPA8 101 aa8.96□□□□□ -0.98
COPB1-206ENST00000529210 TP53TG1Q9Y2A0 90 aa8.96□□□□□ -0.98
COPB1-206ENST00000529210 KCNIP3Q9Y2W7 256 aa8.96□□□□□ -0.98
COPB1-206ENST00000529210 SELENOKQ9Y6D0 94 aa8.96□□□□□ -0.98
COPB1-206ENST00000529210 TENM2Q9NT68 2774 aa8.95□□□□□ -0.98
COPB1-206ENST00000529210 IGHV3OR16-8A0A075B7F1 116 aa8.95□□□□□ -0.98
COPB1-206ENST00000529210 A0A0B4J2A0 478 aa8.95□□□□□ -0.98
COPB1-206ENST00000529210 PIGBOS1A0A0B4J2F0 54 aa8.95□□□□□ -0.98
COPB1-206ENST00000529210 UBE2CO00762 179 aa8.95□□□□□ -0.98
COPB1-206ENST00000529210 IGHV3-48P01763 117 aa8.95□□□□□ -0.98
COPB1-206ENST00000529210 BMI1P35226 326 aa8.95□□□□□ -0.98
COPB1-206ENST00000529210 CMC4P56277 68 aaPredicted RBP8.95□□□□□ -0.98
COPB1-206ENST00000529210 SUPT4H1P63272 117 aaKnown RBP8.95□□□□□ -0.98
COPB1-206ENST00000529210 KLF9Q13886 244 aaPredicted RBP8.95□□□□□ -0.98
COPB1-206ENST00000529210 NMSQ5H8A3 153 aa8.95□□□□□ -0.98
COPB1-206ENST00000529210 TMEM268Q5VZI3 342 aa8.95□□□□□ -0.98
COPB1-206ENST00000529210 Q6ZWC4 215 aa8.95□□□□□ -0.98
COPB1-206ENST00000529210 RNASE11Q8TAA1 199 aaKnown RBP8.95□□□□□ -0.98
COPB1-206ENST00000529210 RNASEH2CQ8TDP1 164 aaKnown RBP8.95□□□□□ -0.98
COPB1-206ENST00000529210 OVOL2Q9BRP0 275 aa8.95□□□□□ -0.98
COPB1-206ENST00000529210 CACNG5Q9UF02 275 aa8.95□□□□□ -0.98
COPB1-206ENST00000529210 SHPKQ9UHJ6 478 aa8.95□□□□□ -0.98
COPB1-206ENST00000529210 V9GYH0 126 aa8.95□□□□□ -0.98
COPB1-206ENST00000529210 TRAV30A0A087WSZ9 112 aa8.94□□□□□ -0.98
COPB1-206ENST00000529210 TRAV2A0A0B4J234 112 aa8.94□□□□□ -0.98
COPB1-206ENST00000529210 ZNF207O43670 478 aaKnown RBP8.94□□□□□ -0.98
COPB1-206ENST00000529210 YIF1AO95070 293 aa8.94□□□□□ -0.98
COPB1-206ENST00000529210 FAUP35544 74 aaKnown RBP8.94□□□□□ -0.98
COPB1-206ENST00000529210 APOC4P55056 127 aa8.94□□□□□ -0.98
COPB1-206ENST00000529210 AP3S2P59780 193 aa8.94□□□□□ -0.98
COPB1-206ENST00000529210 SRPXP78539 464 aa8.94□□□□□ -0.98
COPB1-206ENST00000529210 CCDC190Q86UF4 302 aa8.94□□□□□ -0.98
COPB1-206ENST00000529210 MRPL36Q9P0J6 103 aaKnown RBP8.94□□□□□ -0.98
COPB1-206ENST00000529210 PUS1Q9Y606 427 aaKnown RBP eCLIP8.94□□□□□ -0.98
COPB1-206ENST00000529210 SACSQ9NZJ4 4579 aa8.94□□□□□ -0.98
COPB1-206ENST00000529210 DUXBA0A1W2PPF3 345 aa8.93□□□□□ -0.98
COPB1-206ENST00000529210 RPS10-NUDT3A0A1W2PQS6 291 aa8.93□□□□□ -0.98
COPB1-206ENST00000529210 SCGB2A1O75556 95 aa8.93□□□□□ -0.98
COPB1-206ENST00000529210 IGKV1-17P01599 117 aa8.93□□□□□ -0.98
COPB1-206ENST00000529210 SULT1A3P0DMM9 295 aa8.93□□□□□ -0.98
COPB1-206ENST00000529210 SULT1A4P0DMN0 295 aa8.93□□□□□ -0.98
COPB1-206ENST00000529210 SLC25A4P12235 298 aa8.93□□□□□ -0.98
COPB1-206ENST00000529210 CRYBB3P26998 211 aa8.93□□□□□ -0.98
COPB1-206ENST00000529210 OPRK1P41145 380 aa8.93□□□□□ -0.98
COPB1-206ENST00000529210 CCR6P51684 374 aa8.93□□□□□ -0.98
COPB1-206ENST00000529210 ATP5IP56385 69 aaPredicted RBP8.93□□□□□ -0.98
COPB1-206ENST00000529210 ZNF79Q15937 498 aa8.93□□□□□ -0.98
COPB1-206ENST00000529210 NOXA1Q86UR1 476 aa8.93□□□□□ -0.98
COPB1-206ENST00000529210 MCUBQ9NWR8 336 aa8.93□□□□□ -0.98
COPB1-206ENST00000529210 HSPB7Q9UBY9 170 aa8.93□□□□□ -0.98
COPB1-206ENST00000529210 LCE6AA0A183 80 aa8.92□□□□□ -0.98
COPB1-206ENST00000529210 A0A1B0GU03 582 aa8.92□□□□□ -0.98
COPB1-206ENST00000529210 ANXA3P12429 323 aa8.92□□□□□ -0.98
COPB1-206ENST00000529210 ATF4P18848 351 aaPredicted RBP8.92□□□□□ -0.98
COPB1-206ENST00000529210 PAFAH1B2P68402 229 aa8.92□□□□□ -0.98
COPB1-206ENST00000529210 TMEM128Q5BJH2 165 aa8.92□□□□□ -0.98
COPB1-206ENST00000529210 PRSS54Q6PEW0 395 aa8.92□□□□□ -0.98
COPB1-206ENST00000529210 LGI3Q8N145 548 aa8.92□□□□□ -0.98
COPB1-206ENST00000529210 TOMM5Q8N4H5 51 aa8.92□□□□□ -0.98
COPB1-206ENST00000529210 LRTM2Q8N967 370 aa8.92□□□□□ -0.98
COPB1-206ENST00000529210 SLC24A4Q8NFF2 622 aa8.92□□□□□ -0.98
COPB1-206ENST00000529210 TMEM170AQ8WVE7 144 aa8.92□□□□□ -0.98
COPB1-206ENST00000529210 ST8SIA2Q92186 375 aa8.92□□□□□ -0.98
COPB1-206ENST00000529210 SLC25A21Q9BQT8 299 aaPredicted RBP8.92□□□□□ -0.98
COPB1-206ENST00000529210 TMEM231Q9H6L2 316 aa8.92□□□□□ -0.98
COPB1-206ENST00000529210 HEYLQ9NQ87 328 aaPredicted RBP8.92□□□□□ -0.98
COPB1-206ENST00000529210 UBQLN2Q9UHD9 624 aa8.92□□□□□ -0.98
COPB1-206ENST00000529210 U3KQ87 197 aa8.92□□□□□ -0.98
COPB1-206ENST00000529210 A0A1W2PS18 150 aa8.91□□□□□ -0.98
COPB1-206ENST00000529210 DFFBO76075 338 aa8.91□□□□□ -0.98
COPB1-206ENST00000529210 IGLC1P0CG04 106 aa8.91□□□□□ -0.98
COPB1-206ENST00000529210 SLC25A6P12236 298 aa8.91□□□□□ -0.98
COPB1-206ENST00000529210 NPY1RP25929 384 aa8.91□□□□□ -0.98
COPB1-206ENST00000529210 S100A5P33763 92 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms