RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, human

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-215	ENST00000528965	DUSP18	Q8NEJ0	188 aa		11.5	□□□□□ -0.57
CTSB-215	ENST00000528965	C11orf45	Q8TAV5	145 aa		11.5	□□□□□ -0.57
CTSB-215	ENST00000528965	PDCD10	Q9BUL8	212 aa		11.5	□□□□□ -0.57
CTSB-215	ENST00000528965	IGHV3OR16-13	A0A075B7E8	117 aa		11.49	□□□□□ -0.57
CTSB-215	ENST00000528965	IGHV3-74	A0A0B4J1X5	117 aa		11.49	□□□□□ -0.57
CTSB-215	ENST00000528965	TRAV2	A0A0B4J234	112 aa		11.49	□□□□□ -0.57
CTSB-215	ENST00000528965	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	11.49	□□□□□ -0.57
CTSB-215	ENST00000528965	ST8SIA3	O43173	380 aa		11.49	□□□□□ -0.57
CTSB-215	ENST00000528965	CA1	P00915	261 aa	Predicted RBP	11.49	□□□□□ -0.57
CTSB-215	ENST00000528965	AKAIN1	P0CW23	69 aa		11.49	□□□□□ -0.57
CTSB-215	ENST00000528965	AKR1C2	P52895	323 aa		11.49	□□□□□ -0.57
CTSB-215	ENST00000528965	ZNF124	Q15973	351 aa		11.49	□□□□□ -0.57
CTSB-215	ENST00000528965	FAM90A2P	Q658T7	463 aa		11.49	□□□□□ -0.57
CTSB-215	ENST00000528965	ZNF600	Q6ZNG1	722 aa		11.49	□□□□□ -0.57
CTSB-215	ENST00000528965	OR11H2	Q8NH07	326 aa		11.49	□□□□□ -0.57
CTSB-215	ENST00000528965	MARCH1	Q8TCQ1	289 aa		11.49	□□□□□ -0.57
CTSB-215	ENST00000528965	C3orf85	A0A1B0GTC6	90 aa		11.48	□□□□□ -0.57
CTSB-215	ENST00000528965	IGKV1-39	P01597	117 aa		11.48	□□□□□ -0.57
CTSB-215	ENST00000528965	IGHV3-48	P01763	117 aa		11.48	□□□□□ -0.57
CTSB-215	ENST00000528965	IGKV1D-39	P04432	117 aa		11.48	□□□□□ -0.57
CTSB-215	ENST00000528965	SUB1	P53999	127 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
CTSB-215	ENST00000528965	RPL11	P62913	178 aa	Known RBP	11.48	□□□□□ -0.57
CTSB-215	ENST00000528965	TOMM20L	Q6UXN7	152 aa		11.48	□□□□□ -0.57
CTSB-215	ENST00000528965	SMIM4	Q8WVI0	70 aa		11.48	□□□□□ -0.57
CTSB-215	ENST00000528965	RRNAD1	Q96FB5	475 aa	Known RBP	11.48	□□□□□ -0.57
CTSB-215	ENST00000528965	VSIR	Q9H7M9	311 aa		11.48	□□□□□ -0.57
CTSB-215	ENST00000528965	FBXL17	Q9UF56	701 aa		11.48	□□□□□ -0.57
CTSB-215	ENST00000528965		A0A1W2PS18	150 aa		11.47	□□□□□ -0.57
CTSB-215	ENST00000528965	CTDSPL	O15194	276 aa		11.47	□□□□□ -0.57
CTSB-215	ENST00000528965	CD74	P04233	296 aa		11.47	□□□□□ -0.57
CTSB-215	ENST00000528965	TNFSF8	P32971	234 aa		11.47	□□□□□ -0.57
CTSB-215	ENST00000528965	HOXA1	P49639	335 aa	Predicted RBP	11.47	□□□□□ -0.57
CTSB-215	ENST00000528965	TCTA	P57738	103 aa		11.47	□□□□□ -0.57
CTSB-215	ENST00000528965	RND3	P61587	244 aa		11.47	□□□□□ -0.57
CTSB-215	ENST00000528965	TMEM187	Q14656	261 aa		11.47	□□□□□ -0.57
CTSB-215	ENST00000528965	PYDC2	Q56P42	97 aa		11.47	□□□□□ -0.57
CTSB-215	ENST00000528965	RPP25L	Q8N5L8	163 aa	Known RBP	11.47	□□□□□ -0.57
CTSB-215	ENST00000528965	OR4D10	Q8NGI6	311 aa		11.47	□□□□□ -0.57
CTSB-215	ENST00000528965	ST8SIA2	Q92186	375 aa		11.47	□□□□□ -0.57
CTSB-215	ENST00000528965	NARS2	Q96I59	477 aa	Known RBP	11.47	□□□□□ -0.57
CTSB-215	ENST00000528965	ZNF414	Q96IQ9	312 aa		11.47	□□□□□ -0.57
CTSB-215	ENST00000528965	SCGB3A2	Q96PL1	93 aa		11.47	□□□□□ -0.57
CTSB-215	ENST00000528965	PRRT1	Q99946	306 aa		11.47	□□□□□ -0.57
CTSB-215	ENST00000528965	MS4A6A	Q9H2W1	248 aa		11.47	□□□□□ -0.57
CTSB-215	ENST00000528965	ENY2	Q9NPA8	101 aa		11.47	□□□□□ -0.57
CTSB-215	ENST00000528965	MCUB	Q9NWR8	336 aa		11.47	□□□□□ -0.57
CTSB-215	ENST00000528965	SCP2D1	Q9UJQ7	156 aa		11.47	□□□□□ -0.57
CTSB-215	ENST00000528965	PUS1	Q9Y606	427 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
CTSB-215	ENST00000528965	INS-IGF2	F8WCM5	200 aa		11.46	□□□□□ -0.57
CTSB-215	ENST00000528965	B3GALNT1	O75752	331 aa		11.46	□□□□□ -0.57
CTSB-215	ENST00000528965	IFNA17	P01571	189 aa		11.46	□□□□□ -0.57
CTSB-215	ENST00000528965	DEFB131A	P59861	70 aa		11.46	□□□□□ -0.57
CTSB-215	ENST00000528965	NANOS2	P60321	138 aa	Known RBP	11.46	□□□□□ -0.57
CTSB-215	ENST00000528965	TMEM41B	Q5BJD5	291 aa		11.46	□□□□□ -0.57
CTSB-215	ENST00000528965	SPINK9	Q5DT21	86 aa		11.46	□□□□□ -0.57
CTSB-215	ENST00000528965	LHFPL1	Q86WI0	220 aa		11.46	□□□□□ -0.57
CTSB-215	ENST00000528965	STH	Q8IWL8	128 aa		11.46	□□□□□ -0.57
CTSB-215	ENST00000528965	OR13C8	Q8NGS7	320 aa		11.46	□□□□□ -0.57
CTSB-215	ENST00000528965	RABAC1	Q9UI14	185 aa		11.46	□□□□□ -0.57
CTSB-215	ENST00000528965	NPPC	P23582	126 aa		11.45	□□□□□ -0.58
CTSB-215	ENST00000528965	FAU	P35544	74 aa	Known RBP	11.45	□□□□□ -0.58
CTSB-215	ENST00000528965	SP6	Q3SY56	376 aa		11.45	□□□□□ -0.58
CTSB-215	ENST00000528965	FAAP20	Q6NZ36	180 aa		11.45	□□□□□ -0.58
CTSB-215	ENST00000528965	C2CD4C	Q8TF44	421 aa		11.45	□□□□□ -0.58
CTSB-215	ENST00000528965	METTL26	Q96S19	204 aa		11.45	□□□□□ -0.58
CTSB-215	ENST00000528965	SLIRP	Q9GZT3	109 aa	Known RBP	11.45	□□□□□ -0.58
CTSB-215	ENST00000528965	ZFAND3	Q9H8U3	227 aa		11.45	□□□□□ -0.58
CTSB-215	ENST00000528965	KCNIP3	Q9Y2W7	256 aa		11.45	□□□□□ -0.58
CTSB-215	ENST00000528965	GSTZ1	O43708	216 aa	Predicted RBP	11.44	□□□□□ -0.58
CTSB-215	ENST00000528965	DEDD	O75618	318 aa		11.44	□□□□□ -0.58
CTSB-215	ENST00000528965	OPRK1	P41145	380 aa		11.44	□□□□□ -0.58
CTSB-215	ENST00000528965	INPP1	P49441	399 aa		11.44	□□□□□ -0.58
CTSB-215	ENST00000528965	EIF2B2	P49770	351 aa	Known RBP	11.44	□□□□□ -0.58
CTSB-215	ENST00000528965	AP3S2	P59780	193 aa		11.44	□□□□□ -0.58
CTSB-215	ENST00000528965	DHODH	Q02127	395 aa		11.44	□□□□□ -0.58
CTSB-215	ENST00000528965	SURF2	Q15527	256 aa	Predicted RBP	11.44	□□□□□ -0.58
CTSB-215	ENST00000528965	LEMD1	Q68G75	181 aa		11.44	□□□□□ -0.58
CTSB-215	ENST00000528965	CENPS	Q8N2Z9	138 aa		11.44	□□□□□ -0.58
CTSB-215	ENST00000528965	OR51S1	Q8NGJ8	323 aa		11.44	□□□□□ -0.58
CTSB-215	ENST00000528965	OR4C16	Q8NGL9	310 aa		11.44	□□□□□ -0.58
CTSB-215	ENST00000528965	GRAMD2B	Q96HH9	432 aa		11.44	□□□□□ -0.58
CTSB-215	ENST00000528965	TP53RK	Q96S44	253 aa		11.44	□□□□□ -0.58
CTSB-215	ENST00000528965	IGHV3-66	A0A0C4DH42	116 aa		11.43	□□□□□ -0.58
CTSB-215	ENST00000528965	C11orf94	C9JXX5	98 aa		11.43	□□□□□ -0.58
CTSB-215	ENST00000528965	CLN5	O75503	358 aa		11.43	□□□□□ -0.58
CTSB-215	ENST00000528965	TMEM50A	O95807	157 aa		11.43	□□□□□ -0.58
CTSB-215	ENST00000528965	IGKV1-5	P01602	117 aa		11.43	□□□□□ -0.58
CTSB-215	ENST00000528965	SPP1	P10451	314 aa		11.43	□□□□□ -0.58
CTSB-215	ENST00000528965	IZUMO4	Q1ZYL8	232 aa		11.43	□□□□□ -0.58
CTSB-215	ENST00000528965	TOMM5	Q8N4H5	51 aa		11.43	□□□□□ -0.58
CTSB-215	ENST00000528965	STXBP6	Q8NFX7	210 aa		11.43	□□□□□ -0.58
CTSB-215	ENST00000528965		A0A0B4J293	547 aa		11.42	□□□□□ -0.58
CTSB-215	ENST00000528965	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.42	□□□□□ -0.58
CTSB-215	ENST00000528965	ANKRD20A5P	A0PJZ0	165 aa		11.42	□□□□□ -0.58
CTSB-215	ENST00000528965	APOH	P02749	345 aa	Predicted RBP	11.42	□□□□□ -0.58
CTSB-215	ENST00000528965		P0C879	139 aa		11.42	□□□□□ -0.58
CTSB-215	ENST00000528965	RNASE2	P10153	161 aa	Known RBP	11.42	□□□□□ -0.58
CTSB-215	ENST00000528965	SPANXN2	Q5MJ10	180 aa		11.42	□□□□□ -0.58
CTSB-215	ENST00000528965	PVRIG	Q6DKI7	326 aa		11.42	□□□□□ -0.58
CTSB-215	ENST00000528965	MORN3	Q6PF18	240 aa	Predicted RBP	11.42	□□□□□ -0.58

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