RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 ZNF616Q08AN1 781 aa6.18□□□□□ -1.42
SSBP3-211ENST00000528787 RPEL1Q2QD12 228 aa6.18□□□□□ -1.42
SSBP3-211ENST00000528787 Q56UQ5 140 aa6.18□□□□□ -1.42
SSBP3-211ENST00000528787 SPINK9Q5DT21 86 aa6.18□□□□□ -1.42
SSBP3-211ENST00000528787 TMEM14EPQ6UXP3 125 aa6.18□□□□□ -1.42
SSBP3-211ENST00000528787 SLC16A13Q7RTY0 426 aa6.18□□□□□ -1.42
SSBP3-211ENST00000528787 TCTE3Q8IZS6 198 aa6.18□□□□□ -1.42
SSBP3-211ENST00000528787 OR1S2Q8NGQ3 325 aa6.18□□□□□ -1.42
SSBP3-211ENST00000528787 OR4X1Q8NH49 305 aa6.18□□□□□ -1.42
SSBP3-211ENST00000528787 GINS3Q9BRX5 216 aa6.18□□□□□ -1.42
SSBP3-211ENST00000528787 MCRIP2Q9BUT9 160 aaKnown RBP6.18□□□□□ -1.42
SSBP3-211ENST00000528787 NPVFQ9HCQ7 196 aa6.18□□□□□ -1.42
SSBP3-211ENST00000528787 ZFHX3Q15911 3703 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 BORCS7-ASMTA0A0B4J1R7 106 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 A0A0D9SG52 128 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 A0A1B0GW64 132 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 HMSDA8MTL9 139 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 C17orf112F2Z3M2 114 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 LINC01619G3V211 115 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 I3L2K1 104 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 CLN5O75503 358 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 SIX6O95475 246 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 IFNA5P01569 189 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 RPLP1P05386 114 aaKnown RBP6.17□□□□□ -1.42
SSBP3-211ENST00000528787 CD28P10747 220 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 LYL1P12980 280 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 MYOD1P15172 320 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 CXCL3P19876 107 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 RPL12P30050 165 aaKnown RBP6.17□□□□□ -1.42
SSBP3-211ENST00000528787 ARL3P36405 182 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 AKR1C1Q04828 323 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 OR2F1Q13607 317 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 PXDC1Q5TGL8 231 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 TEPPQ6URK8 271 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 ZNF546Q86UE3 836 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 TMEM252Q8N6L7 170 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 ZNF709Q8N972 641 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 SCARB1Q8WTV0 552 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 HYLS1Q96M11 299 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 FANCD2OSQ96PS1 177 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 CITED2Q99967 270 aaPredicted RBP6.17□□□□□ -1.42
SSBP3-211ENST00000528787 TMEM147Q9BVK8 224 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 ELOVL1Q9BW60 279 aa6.17□□□□□ -1.42
SSBP3-211ENST00000528787 FXYD6-FXYD2A0A087WZ82 144 aa6.16□□□□□ -1.42
SSBP3-211ENST00000528787 ZFP92A6NM28 416 aa6.16□□□□□ -1.42
SSBP3-211ENST00000528787 C15orf62A8K5M9 175 aa6.16□□□□□ -1.42
SSBP3-211ENST00000528787 CCL24O00175 119 aa6.16□□□□□ -1.42
SSBP3-211ENST00000528787 PFDN1O60925 122 aa6.16□□□□□ -1.42
SSBP3-211ENST00000528787 CLEC3BP05452 202 aa6.16□□□□□ -1.42
SSBP3-211ENST00000528787 EIF2B2P49770 351 aaKnown RBP6.16□□□□□ -1.42
SSBP3-211ENST00000528787 ELLP55199 621 aaPredicted RBP6.16□□□□□ -1.42
SSBP3-211ENST00000528787 YPEL3P61236 119 aaPredicted RBP6.16□□□□□ -1.42
SSBP3-211ENST00000528787 SLC38A11Q08AI6 406 aa6.16□□□□□ -1.42
SSBP3-211ENST00000528787 ZNF345Q14585 488 aa6.16□□□□□ -1.42
SSBP3-211ENST00000528787 OR8G2PQ6IF36 304 aa6.16□□□□□ -1.42
SSBP3-211ENST00000528787 ACOT7LQ6ZUV0 252 aa6.16□□□□□ -1.42
SSBP3-211ENST00000528787 TMEM144Q7Z5S9 345 aa6.16□□□□□ -1.42
SSBP3-211ENST00000528787 GPHB5Q86YW7 130 aa6.16□□□□□ -1.42
SSBP3-211ENST00000528787 UBAC2Q8NBM4 344 aa6.16□□□□□ -1.42
SSBP3-211ENST00000528787 OR1N2Q8NGR9 330 aa6.16□□□□□ -1.42
SSBP3-211ENST00000528787 ZNF502Q8TBZ5 544 aa6.16□□□□□ -1.42
SSBP3-211ENST00000528787 SCGB1C1Q8TD33 95 aa6.16□□□□□ -1.42
SSBP3-211ENST00000528787 Q8WTZ3 238 aa6.16□□□□□ -1.42
SSBP3-211ENST00000528787 AQP10Q96PS8 301 aa6.16□□□□□ -1.42
SSBP3-211ENST00000528787 KLK15Q9H2R5 256 aa6.16□□□□□ -1.42
SSBP3-211ENST00000528787 TMEM231Q9H6L2 316 aa6.16□□□□□ -1.42
SSBP3-211ENST00000528787 UQCC1Q9NVA1 299 aa6.16□□□□□ -1.42
SSBP3-211ENST00000528787 MBD2Q9UBB5 411 aa6.16□□□□□ -1.42
SSBP3-211ENST00000528787 UFC1Q9Y3C8 167 aa6.16□□□□□ -1.42
SSBP3-211ENST00000528787 A0A1W2PS18 150 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 SMCO3A2RU48 225 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 H3BP45 60 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 I3L521 148 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 K7EIM0 57 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 LGALS9O00182 355 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 BMPR1BO00238 502 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 NDUFA4O00483 81 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 TGOLN2O43493 480 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 JTBO76095 146 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 NDUFB8O95169 186 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 C1QBP02746 253 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 METTL15P1P0C7V9 234 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 OR10J1P30954 320 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 INSL3P51460 131 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 SRSF2Q01130 221 aaKnown RBP6.15□□□□□ -1.42
SSBP3-211ENST00000528787 EWSR1Q01844 656 aaKnown RBP eCLIP6.15□□□□□ -1.42
SSBP3-211ENST00000528787 NSUN5P1Q3KNT7 163 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 EIF5AL1Q6IS14 154 aaKnown RBP6.15□□□□□ -1.42
SSBP3-211ENST00000528787 CLEC19AQ6UXS0 136 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 ZNF600Q6ZNG1 722 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 Q6ZRG5 221 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 LCNL1Q6ZST4 164 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 C1QL4Q86Z23 238 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 BPIFCQ8NFQ6 507 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 OR11H1Q8NG94 326 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 MARC2Q969Z3 335 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 WDR89Q96FK6 387 aaPredicted RBP6.15□□□□□ -1.42
SSBP3-211ENST00000528787 GRAMD2BQ96HH9 432 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 TRGV9Q99603 122 aa6.15□□□□□ -1.42
SSBP3-211ENST00000528787 PARD6GQ9BYG4 376 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms