RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 TMEM242Q9NWH2 141 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 STAG3L3P0CL85 134 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 FOXA3P55318 350 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-219ENST00000528621 TRGV2A0A075B6R0 118 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 M0R1W7 72 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 TSPAN13O95857 204 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 ADMP35318 185 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 SLC25A2Q9BXI2 301 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 JKAMPQ9P055 326 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 TRAV8-6A0A0B4J262 113 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-219ENST00000528621 EMP1P54849 157 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 TTC32Q5I0X7 151 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 TMEM42Q69YG0 159 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 RASL11AQ6T310 242 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 PAQR4Q8N4S7 273 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-219ENST00000528621 OR5AN1Q8NGI8 311 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 ANK1P16157 1881 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 MUC21A0A0G2JKD1 596 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 MUC21A0A140T8X8 626 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 CD7P09564 240 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 TDGF1P13385 188 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 MUC21Q5SSG8 566 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 SIGLEC15Q6ZMC9 328 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 NR2C2APQ86WQ0 139 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 BEND2Q8NDZ0 799 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 FGFBP3Q8TAT2 258 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 GFI1Q99684 422 aa7.05□□□□□ -1.28
CTNND1-219ENST00000528621 HIGD1CA8MV81 97 aa7.04□□□□□ -1.28
CTNND1-219ENST00000528621 MALP21145 153 aa7.04□□□□□ -1.28
CTNND1-219ENST00000528621 CNTFRP26992 372 aa7.04□□□□□ -1.28
CTNND1-219ENST00000528621 RHOGP84095 191 aa7.04□□□□□ -1.28
CTNND1-219ENST00000528621 LY6G6FQ5SQ64 297 aa7.04□□□□□ -1.28
CTNND1-219ENST00000528621 NXT2Q9NPJ8 142 aaKnown RBP7.04□□□□□ -1.28
CTNND1-219ENST00000528621 PRB3Q04118 309 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-219ENST00000528621 ORMDL2Q53FV1 153 aa7.04□□□□□ -1.28
CTNND1-219ENST00000528621 SBF1O95248 1867 aa7.04□□□□□ -1.28
CTNND1-219ENST00000528621 GAS1P54826 345 aa7.04□□□□□ -1.28
CTNND1-219ENST00000528621 METRNQ9UJH8 293 aa7.04□□□□□ -1.28
CTNND1-219ENST00000528621 IGHV2-26A0A0B4J1V2 119 aa7.04□□□□□ -1.28
CTNND1-219ENST00000528621 GTSCR1Q86UQ5 136 aa7.04□□□□□ -1.28
CTNND1-219ENST00000528621 IGHV3OR16-8A0A075B7F1 116 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 PRR32B1ATL7 298 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 SRRM5B3KS81 715 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 TIMM23O14925 209 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 TMEM50AO95807 157 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 EFNA4P52798 201 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 Q6ZS49 121 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 FOXL2NBQ6ZUU3 175 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 DTX2Q86UW9 622 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 WFDC1Q9HC57 220 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 MBNL3Q9NUK0 354 aaKnown RBP7.03□□□□□ -1.28
CTNND1-219ENST00000528621 TRAV1-1A0A0B4J248 108 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 LDLRAD4O15165 306 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 CTAG1AP78358 180 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 DTX1Q86Y01 620 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 GLMPQ8WWB7 406 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 SRSF8Q9BRL6 282 aaKnown RBP7.03□□□□□ -1.28
CTNND1-219ENST00000528621 RNASE7Q9H1E1 156 aaKnown RBP7.03□□□□□ -1.28
CTNND1-219ENST00000528621 PSG8Q9UQ74 426 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 FOXF2Q12947 444 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 C3orf36Q3SXR2 165 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 WDR83OSQ9Y284 106 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 CACNA1CQ13936 2221 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 PAX8Q06710 450 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 NSUN5P1Q3KNT7 163 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 TPTE2P1Q5T6R2 138 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 SPSB3Q6PJ21 355 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 MDS2Q8NDY4 140 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 TRGV9Q99603 122 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 DOCK4Q8N1I0 1966 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 TRBV7-1A0A0A6YYK4 115 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 TRAV41A0A0B4J266 112 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 IFI27P40305 119 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-219ENST00000528621 EFNB3Q15768 340 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 TMEM200BQ69YZ2 307 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 LHFPL1Q86WI0 220 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 TSKUQ8WUA8 353 aa7.03□□□□□ -1.28
CTNND1-219ENST00000528621 A0A087WV48 116 aa7.02□□□□□ -1.29
CTNND1-219ENST00000528621 THSD7BQ9C0I4 1608 aa7.02□□□□□ -1.29
CTNND1-219ENST00000528621 SMPXQ9UHP9 88 aa7.02□□□□□ -1.29
CTNND1-219ENST00000528621 RPUSD1Q9UJJ7 312 aaKnown RBP7.02□□□□□ -1.29
CTNND1-219ENST00000528621 SLC25A15Q9Y619 301 aa7.02□□□□□ -1.29
CTNND1-219ENST00000528621 LY96Q9Y6Y9 160 aa7.02□□□□□ -1.29
CTNND1-219ENST00000528621 FNDC10F2Z333 226 aa7.02□□□□□ -1.29
CTNND1-219ENST00000528621 LYNX1G3V0Z9 82 aa7.02□□□□□ -1.29
CTNND1-219ENST00000528621 TMEM178BH3BS89 294 aa7.02□□□□□ -1.29
CTNND1-219ENST00000528621 LYNX1P0DP58 116 aa7.02□□□□□ -1.29
CTNND1-219ENST00000528621 Q0VFX4 171 aa7.02□□□□□ -1.29
CTNND1-219ENST00000528621 LY6DQ14210 128 aa7.02□□□□□ -1.29
CTNND1-219ENST00000528621 PNRC2Q9NPJ4 139 aaKnown RBP7.02□□□□□ -1.29
CTNND1-219ENST00000528621 TRAV40A0A0B4J280 105 aa7.02□□□□□ -1.29
CTNND1-219ENST00000528621 HBDP02042 147 aa7.02□□□□□ -1.29
CTNND1-219ENST00000528621 HEPN1Q6WQI6 88 aa7.02□□□□□ -1.29
CTNND1-219ENST00000528621 SLC25A48Q6ZT89 311 aaKnown RBP7.02□□□□□ -1.29
CTNND1-219ENST00000528621 ST6GALNAC3Q8NDV1 305 aa7.02□□□□□ -1.29
CTNND1-219ENST00000528621 ZNF319Q9P2F9 582 aa7.02□□□□□ -1.29
CTNND1-219ENST00000528621 FAM223BA6NKX1 122 aa7.02□□□□□ -1.29
CTNND1-219ENST00000528621 CD55P08174 381 aa7.02□□□□□ -1.29
CTNND1-219ENST00000528621 IGHV1-8P0DP01 117 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms