RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 LYL1P12980 280 aa11.61□□□□□ -0.55
CAPN1-213ENST00000527897 FCGR2BP31994 310 aaPredicted RBP11.61□□□□□ -0.55
CAPN1-213ENST00000527897 TFPI2P48307 235 aa11.61□□□□□ -0.55
CAPN1-213ENST00000527897 KLF9Q13886 244 aaPredicted RBP11.61□□□□□ -0.55
CAPN1-213ENST00000527897 ZNF79Q15937 498 aa11.61□□□□□ -0.55
CAPN1-213ENST00000527897 MLANAQ16655 118 aa11.61□□□□□ -0.55
CAPN1-213ENST00000527897 ZFAND6Q6FIF0 208 aa11.61□□□□□ -0.55
CAPN1-213ENST00000527897 LINC00322Q6ZN03 302 aaPredicted RBP11.61□□□□□ -0.55
CAPN1-213ENST00000527897 TRIM63Q969Q1 353 aa11.61□□□□□ -0.55
CAPN1-213ENST00000527897 RNF2Q99496 336 aa11.61□□□□□ -0.55
CAPN1-213ENST00000527897 RHPN1-AS1Q9BWJ2 59 aa11.61□□□□□ -0.55
CAPN1-213ENST00000527897 HIPK2Q9H2X6 1198 aa11.61□□□□□ -0.55
CAPN1-213ENST00000527897 PUS1Q9Y606 427 aaKnown RBP eCLIP11.61□□□□□ -0.55
CAPN1-213ENST00000527897 TMEM56-RWDD3S4R434 201 aa11.61□□□□□ -0.55
CAPN1-213ENST00000527897 SULT1A3P0DMM9 295 aa11.6□□□□□ -0.55
CAPN1-213ENST00000527897 SULT1A4P0DMN0 295 aa11.6□□□□□ -0.55
CAPN1-213ENST00000527897 ANXA3P12429 323 aa11.6□□□□□ -0.55
CAPN1-213ENST00000527897 HTR2BP41595 481 aa11.6□□□□□ -0.55
CAPN1-213ENST00000527897 SPANXN2Q5MJ10 180 aa11.6□□□□□ -0.55
CAPN1-213ENST00000527897 TOMM20LQ6UXN7 152 aa11.6□□□□□ -0.55
CAPN1-213ENST00000527897 ZNF600Q6ZNG1 722 aa11.6□□□□□ -0.55
CAPN1-213ENST00000527897 LYZL2Q7Z4W2 148 aa11.6□□□□□ -0.55
CAPN1-213ENST00000527897 OR52E5Q8NH55 327 aa11.6□□□□□ -0.55
CAPN1-213ENST00000527897 GALNT14Q96FL9 552 aa11.6□□□□□ -0.55
CAPN1-213ENST00000527897 ZNF414Q96IQ9 312 aa11.6□□□□□ -0.55
CAPN1-213ENST00000527897 GINS3Q9BRX5 216 aa11.6□□□□□ -0.55
CAPN1-213ENST00000527897 FNDC4Q9H6D8 234 aaPredicted RBP11.6□□□□□ -0.55
CAPN1-213ENST00000527897 MRPL36Q9P0J6 103 aaKnown RBP11.6□□□□□ -0.55
CAPN1-213ENST00000527897 LOC102724200A0A096LPH7 203 aaPredicted RBP11.59□□□□□ -0.55
CAPN1-213ENST00000527897 IGHV3-66A0A0C4DH42 116 aa11.59□□□□□ -0.55
CAPN1-213ENST00000527897 OR4C46A6NHA9 309 aa11.59□□□□□ -0.55
CAPN1-213ENST00000527897 CHEK1O14757 476 aa11.59□□□□□ -0.55
CAPN1-213ENST00000527897 TMEM50AO95807 157 aa11.59□□□□□ -0.55
CAPN1-213ENST00000527897 VAMP1P23763 118 aa11.59□□□□□ -0.55
CAPN1-213ENST00000527897 INPP1P49441 399 aa11.59□□□□□ -0.55
CAPN1-213ENST00000527897 SUPT4H1P63272 117 aaKnown RBP11.59□□□□□ -0.55
CAPN1-213ENST00000527897 CCDC190Q86UF4 302 aa11.59□□□□□ -0.55
CAPN1-213ENST00000527897 LGI3Q8N145 548 aa11.59□□□□□ -0.55
CAPN1-213ENST00000527897 GBGT1Q8N5D6 347 aa11.59□□□□□ -0.55
CAPN1-213ENST00000527897 IL22RA2Q969J5 263 aa11.59□□□□□ -0.55
CAPN1-213ENST00000527897 OR10C1Q96KK4 312 aa11.59□□□□□ -0.55
CAPN1-213ENST00000527897 GGTLC1Q9BX51 225 aa11.59□□□□□ -0.55
CAPN1-213ENST00000527897 RPS10-NUDT3A0A1W2PQS6 291 aa11.58□□□□□ -0.56
CAPN1-213ENST00000527897 SCGB2A1O75556 95 aa11.58□□□□□ -0.56
CAPN1-213ENST00000527897 CASC10Q5T4H9 136 aa11.58□□□□□ -0.56
CAPN1-213ENST00000527897 SLC24A4Q8NFF2 622 aa11.58□□□□□ -0.56
CAPN1-213ENST00000527897 EDA2RQ9HAV5 297 aa11.58□□□□□ -0.56
CAPN1-213ENST00000527897 A0A0B4J2A0 478 aa11.57□□□□□ -0.56
CAPN1-213ENST00000527897 A0A1B0GU03 582 aa11.57□□□□□ -0.56
CAPN1-213ENST00000527897 ZNF701M0R085 212 aaPredicted RBP11.57□□□□□ -0.56
CAPN1-213ENST00000527897 CLN5O75503 358 aa11.57□□□□□ -0.56
CAPN1-213ENST00000527897 IFNA10P01566 189 aa11.57□□□□□ -0.56
CAPN1-213ENST00000527897 APOHP02749 345 aaPredicted RBP11.57□□□□□ -0.56
CAPN1-213ENST00000527897 BMI1P35226 326 aa11.57□□□□□ -0.56
CAPN1-213ENST00000527897 RPL11P62913 178 aaKnown RBP11.57□□□□□ -0.56
CAPN1-213ENST00000527897 SRPXP78539 464 aa11.57□□□□□ -0.56
CAPN1-213ENST00000527897 SMCO1Q147U7 214 aa11.57□□□□□ -0.56
CAPN1-213ENST00000527897 BSXQ3C1V8 233 aa11.57□□□□□ -0.56
CAPN1-213ENST00000527897 ODF3L2Q3SX64 289 aa11.57□□□□□ -0.56
CAPN1-213ENST00000527897 AARDQ4LEZ3 155 aa11.57□□□□□ -0.56
CAPN1-213ENST00000527897 PVRIGQ6DKI7 326 aa11.57□□□□□ -0.56
CAPN1-213ENST00000527897 TCF24Q7RTU0 167 aa11.57□□□□□ -0.56
CAPN1-213ENST00000527897 WFDC3Q8IUB2 231 aa11.57□□□□□ -0.56
CAPN1-213ENST00000527897 OR4X1Q8NH49 305 aa11.57□□□□□ -0.56
CAPN1-213ENST00000527897 OR1S1Q8NH92 325 aa11.57□□□□□ -0.56
CAPN1-213ENST00000527897 ST8SIA2Q92186 375 aa11.57□□□□□ -0.56
CAPN1-213ENST00000527897 ZFAND3Q9H8U3 227 aa11.57□□□□□ -0.56
CAPN1-213ENST00000527897 SHPKQ9UHJ6 478 aa11.57□□□□□ -0.56
CAPN1-213ENST00000527897 LINC00854A0A1B0GVQ3 168 aa11.56□□□□□ -0.56
CAPN1-213ENST00000527897 RPL35AP18077 110 aaKnown RBP11.56□□□□□ -0.56
CAPN1-213ENST00000527897 NPY1RP25929 384 aa11.56□□□□□ -0.56
CAPN1-213ENST00000527897 CCR6P51684 374 aa11.56□□□□□ -0.56
CAPN1-213ENST00000527897 TNFRSF9Q07011 255 aa11.56□□□□□ -0.56
CAPN1-213ENST00000527897 TIGITQ495A1 244 aa11.56□□□□□ -0.56
CAPN1-213ENST00000527897 C2orf83Q53S99 150 aa11.56□□□□□ -0.56
CAPN1-213ENST00000527897 NMSQ5H8A3 153 aa11.56□□□□□ -0.56
CAPN1-213ENST00000527897 TRIQKQ629K1 86 aa11.56□□□□□ -0.56
CAPN1-213ENST00000527897 APRG1Q8IVJ8 170 aa11.56□□□□□ -0.56
CAPN1-213ENST00000527897 SRRQ9GZT4 340 aa11.56□□□□□ -0.56
CAPN1-213ENST00000527897 RBKSQ9H477 322 aa11.56□□□□□ -0.56
CAPN1-213ENST00000527897 NPPCP23582 126 aa11.55□□□□□ -0.56
CAPN1-213ENST00000527897 RND2P52198 227 aa11.55□□□□□ -0.56
CAPN1-213ENST00000527897 PAFAH1B2P68402 229 aa11.55□□□□□ -0.56
CAPN1-213ENST00000527897 TMEM128Q5BJH2 165 aa11.55□□□□□ -0.56
CAPN1-213ENST00000527897 RNASEH2CQ8TDP1 164 aaKnown RBP11.55□□□□□ -0.56
CAPN1-213ENST00000527897 DTD1Q8TEA8 209 aa11.55□□□□□ -0.56
CAPN1-213ENST00000527897 ACY3Q96HD9 319 aa11.55□□□□□ -0.56
CAPN1-213ENST00000527897 SLC25A21Q9BQT8 299 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-213ENST00000527897 CACFD1Q9UGQ2 172 aa11.55□□□□□ -0.56
CAPN1-213ENST00000527897 DNASE2O00115 360 aaPredicted RBP11.54□□□□□ -0.56
CAPN1-213ENST00000527897 DFFBO76075 338 aa11.54□□□□□ -0.56
CAPN1-213ENST00000527897 SLC25A4P12235 298 aa11.54□□□□□ -0.56
CAPN1-213ENST00000527897 APOC4P55056 127 aa11.54□□□□□ -0.56
CAPN1-213ENST00000527897 ZNF124Q15973 351 aa11.54□□□□□ -0.56
CAPN1-213ENST00000527897 PRSS54Q6PEW0 395 aa11.54□□□□□ -0.56
CAPN1-213ENST00000527897 NOXA1Q86UR1 476 aa11.54□□□□□ -0.56
CAPN1-213ENST00000527897 CENPSQ8N2Z9 138 aa11.54□□□□□ -0.56
CAPN1-213ENST00000527897 LILRB2Q8N423 598 aa11.54□□□□□ -0.56
CAPN1-213ENST00000527897 TMEM170AQ8WVE7 144 aa11.54□□□□□ -0.56
CAPN1-213ENST00000527897 METTL26Q96S19 204 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms