RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 BPIFB3P59826 476 aa12.35□□□□□ -0.43
USH1C-207ENST00000527720 PRSS8Q16651 343 aa12.35□□□□□ -0.43
USH1C-207ENST00000527720 HIST1H2BLQ99880 126 aa12.35□□□□□ -0.43
USH1C-207ENST00000527720 COL25A1Q9BXS0 654 aaPredicted RBP12.35□□□□□ -0.43
USH1C-207ENST00000527720 DMRT1Q9Y5R6 373 aa12.35□□□□□ -0.43
USH1C-207ENST00000527720 INSIG2Q9Y5U4 225 aa12.35□□□□□ -0.43
USH1C-207ENST00000527720 PPIAL4CA0A0B4J2A2 164 aa12.35□□□□□ -0.43
USH1C-207ENST00000527720 IGHV1-3A0A0C4DH29 117 aa12.35□□□□□ -0.43
USH1C-207ENST00000527720 IGLC7A0M8Q6 106 aa12.35□□□□□ -0.43
USH1C-207ENST00000527720 K7EN84 100 aa12.35□□□□□ -0.43
USH1C-207ENST00000527720 PPIAL4GP0DN37 164 aa12.35□□□□□ -0.43
USH1C-207ENST00000527720 PAX2Q02962 417 aa12.35□□□□□ -0.43
USH1C-207ENST00000527720 NPIPB3Q92617 1050 aa12.35□□□□□ -0.43
USH1C-207ENST00000527720 RITA1Q96K30 269 aa12.35□□□□□ -0.43
USH1C-207ENST00000527720 FAM167A-AS1Q96KT0 104 aa12.35□□□□□ -0.43
USH1C-207ENST00000527720 PACRGQ96M98 296 aaPredicted RBP12.35□□□□□ -0.43
USH1C-207ENST00000527720 SLC25A2Q9BXI2 301 aa12.35□□□□□ -0.43
USH1C-207ENST00000527720 TPSG1Q9NRR2 321 aa12.35□□□□□ -0.43
USH1C-207ENST00000527720 IL36BQ9NZH7 164 aa12.35□□□□□ -0.43
USH1C-207ENST00000527720 CEP295Q9C0D2 2601 aa12.34□□□□□ -0.43
USH1C-207ENST00000527720 COX7A2P2O60397 106 aa12.34□□□□□ -0.43
USH1C-207ENST00000527720 CRYGCP07315 174 aa12.34□□□□□ -0.43
USH1C-207ENST00000527720 RPL27AP46776 148 aaKnown RBP12.34□□□□□ -0.43
USH1C-207ENST00000527720 GNG4P50150 75 aa12.34□□□□□ -0.43
USH1C-207ENST00000527720 OR8B3Q8NGG8 313 aa12.34□□□□□ -0.43
USH1C-207ENST00000527720 OR8B2Q96RD0 313 aa12.34□□□□□ -0.43
USH1C-207ENST00000527720 RNF5Q99942 180 aa12.34□□□□□ -0.43
USH1C-207ENST00000527720 IGKV1D-37A0A075B6S9 117 aa12.34□□□□□ -0.43
USH1C-207ENST00000527720 LYNX1G3V0Z9 82 aa12.34□□□□□ -0.43
USH1C-207ENST00000527720 CORTO00230 105 aa12.34□□□□□ -0.43
USH1C-207ENST00000527720 OR10J4P0C629 311 aa12.34□□□□□ -0.43
USH1C-207ENST00000527720 LYNX1P0DP58 116 aa12.34□□□□□ -0.43
USH1C-207ENST00000527720 CRYBB3P26998 211 aa12.34□□□□□ -0.43
USH1C-207ENST00000527720 GRNP28799 593 aaKnown RBP12.34□□□□□ -0.43
USH1C-207ENST00000527720 C10orf113Q5VZT2 155 aa12.34□□□□□ -0.43
USH1C-207ENST00000527720 RAXQ9Y2V3 346 aa12.34□□□□□ -0.43
USH1C-207ENST00000527720 TRAPPC1Q9Y5R8 145 aa12.34□□□□□ -0.43
USH1C-207ENST00000527720 GGTLC3B5MD39 225 aa12.33□□□□□ -0.44
USH1C-207ENST00000527720 YPEL3P61236 119 aaPredicted RBP12.33□□□□□ -0.44
USH1C-207ENST00000527720 CENPWQ5EE01 88 aa12.33□□□□□ -0.44
USH1C-207ENST00000527720 RAB1BQ9H0U4 201 aa12.33□□□□□ -0.44
USH1C-207ENST00000527720 SIGLEC9Q9Y336 463 aa12.33□□□□□ -0.44
USH1C-207ENST00000527720 PLXNB1O43157 2135 aa12.33□□□□□ -0.44
USH1C-207ENST00000527720 KALRNO60229 2985 aa12.33□□□□□ -0.44
USH1C-207ENST00000527720 IGHV3-72A0A0B4J1Y9 119 aa12.32□□□□□ -0.44
USH1C-207ENST00000527720 HNF1AP20823 631 aa12.32□□□□□ -0.44
USH1C-207ENST00000527720 COMPP49747 757 aaPredicted RBP12.32□□□□□ -0.44
USH1C-207ENST00000527720 CNN1P51911 297 aaKnown RBP12.32□□□□□ -0.44
USH1C-207ENST00000527720 UBE2L3P68036 154 aaKnown RBP12.32□□□□□ -0.44
USH1C-207ENST00000527720 SSBP2P81877 361 aaPredicted RBP12.32□□□□□ -0.44
USH1C-207ENST00000527720 OR5AU1Q8NGC0 362 aa12.32□□□□□ -0.44
USH1C-207ENST00000527720 C22orf15Q8WYQ4 148 aa12.32□□□□□ -0.44
USH1C-207ENST00000527720 LINC00587B1AMM8 73 aa12.32□□□□□ -0.44
USH1C-207ENST00000527720 SUMO1P63165 101 aaKnown RBP12.32□□□□□ -0.44
USH1C-207ENST00000527720 ADORA2A-AS1P86434 159 aa12.32□□□□□ -0.44
USH1C-207ENST00000527720 TNXAQ16473 311 aa12.32□□□□□ -0.44
USH1C-207ENST00000527720 TIGITQ495A1 244 aa12.32□□□□□ -0.44
USH1C-207ENST00000527720 LY6G5BQ8NDX9 201 aa12.32□□□□□ -0.44
USH1C-207ENST00000527720 RPEQ96AT9 228 aa12.32□□□□□ -0.44
USH1C-207ENST00000527720 ANKHD1Q8IWZ3 2542 aaKnown RBP12.31□□□□□ -0.44
USH1C-207ENST00000527720 LIPFP07098 398 aa12.31□□□□□ -0.44
USH1C-207ENST00000527720 HIST1H1BP16401 226 aaKnown RBP12.31□□□□□ -0.44
USH1C-207ENST00000527720 ZNF90Q03938 601 aa12.31□□□□□ -0.44
USH1C-207ENST00000527720 PPP1R27Q86WC6 154 aa12.31□□□□□ -0.44
USH1C-207ENST00000527720 TRGV9Q99603 122 aa12.31□□□□□ -0.44
USH1C-207ENST00000527720 OSTCQ9NRP0 149 aa12.31□□□□□ -0.44
USH1C-207ENST00000527720 ZNF355PQ9NSJ1 428 aa12.31□□□□□ -0.44
USH1C-207ENST00000527720 LY6LH3BQJ8 138 aa12.31□□□□□ -0.44
USH1C-207ENST00000527720 AMBPP02760 352 aa12.31□□□□□ -0.44
USH1C-207ENST00000527720 ERVFC1-1P60608 527 aa12.31□□□□□ -0.44
USH1C-207ENST00000527720 RPEL1Q2QD12 228 aa12.31□□□□□ -0.44
USH1C-207ENST00000527720 PATE2Q6UY27 113 aa12.31□□□□□ -0.44
USH1C-207ENST00000527720 TMEM116Q8NCL8 245 aa12.31□□□□□ -0.44
USH1C-207ENST00000527720 STXBP6Q8NFX7 210 aa12.31□□□□□ -0.44
USH1C-207ENST00000527720 PAXXQ9BUH6 204 aa12.31□□□□□ -0.44
USH1C-207ENST00000527720 GCGP01275 180 aa12.3□□□□□ -0.44
USH1C-207ENST00000527720 REG1AP05451 166 aa12.3□□□□□ -0.44
USH1C-207ENST00000527720 TAS2R60P59551 318 aa12.3□□□□□ -0.44
USH1C-207ENST00000527720 RPL19P84098 196 aaKnown RBP12.3□□□□□ -0.44
USH1C-207ENST00000527720 MORN5Q5VZ52 161 aa12.3□□□□□ -0.44
USH1C-207ENST00000527720 TIMD4Q96H15 378 aa12.3□□□□□ -0.44
USH1C-207ENST00000527720 TNFRSF19Q9NS68 423 aa12.3□□□□□ -0.44
USH1C-207ENST00000527720 CBLN4Q9NTU7 201 aa12.3□□□□□ -0.44
USH1C-207ENST00000527720 MRPL36Q9P0J6 103 aaKnown RBP12.3□□□□□ -0.44
USH1C-207ENST00000527720 V9GYV3 84 aa12.3□□□□□ -0.44
USH1C-207ENST00000527720 TRAV5A0A0B4J249 113 aa12.3□□□□□ -0.44
USH1C-207ENST00000527720 LGALS4P56470 323 aa12.3□□□□□ -0.44
USH1C-207ENST00000527720 OR5R1Q8NH85 324 aa12.3□□□□□ -0.44
USH1C-207ENST00000527720 MISP3Q96FF7 219 aa12.3□□□□□ -0.44
USH1C-207ENST00000527720 IGF2BP2-AS1Q96M15 143 aa12.3□□□□□ -0.44
USH1C-207ENST00000527720 SRSF8Q9BRL6 282 aaKnown RBP12.3□□□□□ -0.44
USH1C-207ENST00000527720 ISLRO14498 428 aa12.29□□□□□ -0.44
USH1C-207ENST00000527720 CNTFRP26992 372 aa12.29□□□□□ -0.44
USH1C-207ENST00000527720 MFAP2P55001 183 aa12.29□□□□□ -0.44
USH1C-207ENST00000527720 NHLH1Q02575 133 aa12.29□□□□□ -0.44
USH1C-207ENST00000527720 HCP5Q6MZN7 132 aa12.29□□□□□ -0.44
USH1C-207ENST00000527720 NEU4Q8WWR8 484 aaPredicted RBP12.29□□□□□ -0.44
USH1C-207ENST00000527720 PERPQ96FX8 193 aa12.29□□□□□ -0.44
USH1C-207ENST00000527720 CDC42EP3Q9UKI2 254 aa12.29□□□□□ -0.44
USH1C-207ENST00000527720 F11RQ9Y624 299 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms