RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 ATP5G3P48201 142 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 MAP1BP46821 2468 aaKnown RBP6.1□□□□□ -1.43
CTNND1-216ENST00000527467 CACNA1GO43497 2377 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 GAGE12HA6NDE8 117 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 NEGR1Q7Z3B1 354 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 REG1AP05451 166 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 WNT2P09544 360 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 ZNF708P17019 499 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 SRD5A1P18405 259 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 SLC25A45Q8N413 288 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 IFI27L2Q9H2X8 130 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 OTORQ9NRC9 128 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 JPT1Q9UK76 154 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 F8W1H4 67 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 NDUFA2O43678 99 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 MMP23AO75900 390 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 C1QAP02745 245 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 CD7P09564 240 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 DSCR9P59020 149 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 TMEM187Q14656 261 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 IGF2-ASQ6U949 168 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 MSRB3Q8IXL7 192 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 CRIPAKQ8N1N5 446 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 NABP1Q96AH0 204 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 CCL19Q99731 98 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 LOXHD1Q8IVV2 1947 aa6.1□□□□□ -1.43
CTNND1-216ENST00000527467 IGHV3OR16-13A0A075B7E8 117 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 IGHV3-74A0A0B4J1X5 117 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 IFNL4K9M1U5 179 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 GNLYP22749 145 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 OR13A1Q8NGR1 328 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 TMEM243Q9BU79 118 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 C1QTNF4Q9BXJ3 329 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 Q9H3A6 140 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 V9GYY9 64 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 TRGV4A0A0C4DH28 118 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 TRBV5-4A0A0C4DH59 114 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 A0A1W2PQD3 144 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 FAM90A9PA6NNJ1 464 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 F2Z2F3 143 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 TBX6O95947 436 aaPredicted RBP6.09□□□□□ -1.43
CTNND1-216ENST00000527467 SLAQ13239 276 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 SP5Q6BEB4 398 aaPredicted RBP6.09□□□□□ -1.43
CTNND1-216ENST00000527467 ATG4DQ86TL0 474 aaPredicted RBP6.09□□□□□ -1.43
CTNND1-216ENST00000527467 WFDC9Q8NEX5 89 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 BRK1Q8WUW1 75 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 DCTN5Q9BTE1 182 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 MCM3APO60318 1980 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 DOCK3Q8IZD9 2030 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 ICE1Q9Y2F5 2266 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 PRSS23O95084 383 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 PRB4P10163 310 aaPredicted RBP6.09□□□□□ -1.43
CTNND1-216ENST00000527467 C6orf226Q5I0X4 101 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 ATRAIDQ6UW56 229 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 OR9G1Q8NH87 305 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 RNASE7Q9H1E1 156 aaKnown RBP6.09□□□□□ -1.43
CTNND1-216ENST00000527467 C5orf66Q9H5L9 145 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 A0A087WX48 190 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 IGHV3-35A0A0C4DH35 117 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 AZU1P20160 251 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 CBLN3Q6UW01 205 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 TEX43Q6ZNM6 134 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 AQP3Q92482 292 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 MRPS18AQ9NVS2 196 aaKnown RBP6.09□□□□□ -1.43
CTNND1-216ENST00000527467 CRIM1Q9NZV1 1036 aa6.09□□□□□ -1.43
CTNND1-216ENST00000527467 UPK3AO75631 287 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 TMEM144Q7Z5S9 345 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 CENPVQ7Z7K6 275 aaPredicted RBP6.08□□□□□ -1.44
CTNND1-216ENST00000527467 CCL4L1Q8NHW4 92 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 PARP14Q460N5 1801 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 SDK1Q7Z5N4 2213 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 TRGV11A0A075B6L2 103 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 IL18BPO95998 194 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 TMEM54Q969K7 222 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 SLC50A1Q9BRV3 221 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 TRAV13-1A0A0B4J241 112 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 TRGV3P03979 118 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 PTGDSP41222 190 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 CRYBA4P53673 196 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 PCOLCEQ15113 449 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 ETDBQ3ZM63 59 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 ZNF362Q5T0B9 420 aaPredicted RBP6.08□□□□□ -1.44
CTNND1-216ENST00000527467 HEPN1Q6WQI6 88 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 FAM214BQ7L5A3 538 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 LIMS2Q7Z4I7 341 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 SCRT1Q9BWW7 348 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 U3KQE9 123 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 RP1L1Q8IWN7 2480 aaPredicted RBP6.08□□□□□ -1.44
CTNND1-216ENST00000527467 A0A1W2PPV9 198 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 FAM231BA6NCW3 169 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 C16orf97H3BN30 126 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 UNQ9370/PRO34162Q6UXP9 181 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 TSKUQ8WUA8 353 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 PILRAQ9UKJ1 303 aa6.08□□□□□ -1.44
CTNND1-216ENST00000527467 FOXA2Q9Y261 457 aaPredicted RBP6.08□□□□□ -1.44
CTNND1-216ENST00000527467 TRBV24-1A0A075B6N3 115 aa6.07□□□□□ -1.44
CTNND1-216ENST00000527467 hDV102S1A0JD36 115 aa6.07□□□□□ -1.44
CTNND1-216ENST00000527467 AHRRA9YTQ3 701 aa6.07□□□□□ -1.44
CTNND1-216ENST00000527467 DUSP14O95147 198 aaKnown RBP6.07□□□□□ -1.44
CTNND1-216ENST00000527467 IGHV3-48P01763 117 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms