RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 IGKV3-7A0A075B6H7 116 aa7.71□□□□□ -1.18
PRPF40B-204ENST00000527253 OR4C46A6NHA9 309 aa7.71□□□□□ -1.18
PRPF40B-204ENST00000527253 B3GALNT1O75752 331 aa7.71□□□□□ -1.18
PRPF40B-204ENST00000527253 RPL35AP18077 110 aaKnown RBP7.71□□□□□ -1.18
PRPF40B-204ENST00000527253 NPBWR1P48145 328 aa7.71□□□□□ -1.18
PRPF40B-204ENST00000527253 TFPI2P48307 235 aa7.71□□□□□ -1.18
PRPF40B-204ENST00000527253 HOXA1P49639 335 aaPredicted RBP7.71□□□□□ -1.18
PRPF40B-204ENST00000527253 SPCS3P61009 180 aa7.71□□□□□ -1.18
PRPF40B-204ENST00000527253 DHODHQ02127 395 aa7.71□□□□□ -1.18
PRPF40B-204ENST00000527253 TMEM187Q14656 261 aa7.71□□□□□ -1.18
PRPF40B-204ENST00000527253 TMEM268Q5VZI3 342 aa7.71□□□□□ -1.18
PRPF40B-204ENST00000527253 GBGT1Q8N5D6 347 aa7.71□□□□□ -1.18
PRPF40B-204ENST00000527253 OR52E5Q8NH55 327 aa7.71□□□□□ -1.18
PRPF40B-204ENST00000527253 RBPMSQ93062 196 aaKnown RBP7.71□□□□□ -1.18
PRPF40B-204ENST00000527253 PDCD10Q9BUL8 212 aa7.71□□□□□ -1.18
PRPF40B-204ENST00000527253 VSIRQ9H7M9 311 aa7.71□□□□□ -1.18
PRPF40B-204ENST00000527253 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.71□□□□□ -1.18
PRPF40B-204ENST00000527253 RABL2AQ9UBK7 228 aaPredicted RBP7.71□□□□□ -1.18
PRPF40B-204ENST00000527253 CACNG5Q9UF02 275 aa7.71□□□□□ -1.18
PRPF40B-204ENST00000527253 RABL2BQ9UNT1 228 aa7.71□□□□□ -1.18
PRPF40B-204ENST00000527253 PUS1Q9Y606 427 aaKnown RBP eCLIP7.71□□□□□ -1.18
PRPF40B-204ENST00000527253 TMEM56-RWDD3S4R434 201 aa7.71□□□□□ -1.18
PRPF40B-204ENST00000527253 DNAH1Q9P2D7 4330 aa7.7□□□□□ -1.18
PRPF40B-204ENST00000527253 IGHV3-66A0A0C4DH42 116 aa7.7□□□□□ -1.18
PRPF40B-204ENST00000527253 CLN5O75503 358 aa7.7□□□□□ -1.18
PRPF40B-204ENST00000527253 IGKV1-17P01599 117 aa7.7□□□□□ -1.18
PRPF40B-204ENST00000527253 SUB1P53999 127 aaKnown RBP eCLIP7.7□□□□□ -1.18
PRPF40B-204ENST00000527253 SUPT4H1P63272 117 aaKnown RBP7.7□□□□□ -1.18
PRPF40B-204ENST00000527253 DEFB135Q30KP9 77 aa7.7□□□□□ -1.18
PRPF40B-204ENST00000527253 ZNF600Q6ZNG1 722 aa7.7□□□□□ -1.18
PRPF40B-204ENST00000527253 TCF24Q7RTU0 167 aa7.7□□□□□ -1.18
PRPF40B-204ENST00000527253 WFDC3Q8IUB2 231 aa7.7□□□□□ -1.18
PRPF40B-204ENST00000527253 FAM219AQ8IW50 185 aa7.7□□□□□ -1.18
PRPF40B-204ENST00000527253 OR4X1Q8NH49 305 aa7.7□□□□□ -1.18
PRPF40B-204ENST00000527253 MCFD2Q8NI22 146 aa7.7□□□□□ -1.18
PRPF40B-204ENST00000527253 RNASE11Q8TAA1 199 aaKnown RBP7.7□□□□□ -1.18
PRPF40B-204ENST00000527253 PRRT1Q99946 306 aa7.7□□□□□ -1.18
PRPF40B-204ENST00000527253 ENY2Q9NPA8 101 aa7.7□□□□□ -1.18
PRPF40B-204ENST00000527253 RSL24D1Q9UHA3 163 aaKnown RBP7.7□□□□□ -1.18
PRPF40B-204ENST00000527253 PLECQ15149 4684 aaKnown RBP7.69□□□□□ -1.18
PRPF40B-204ENST00000527253 FABP12A6NFH5 140 aa7.69□□□□□ -1.18
PRPF40B-204ENST00000527253 SPRY2O43597 315 aa7.69□□□□□ -1.18
PRPF40B-204ENST00000527253 DFFBO76075 338 aa7.69□□□□□ -1.18
PRPF40B-204ENST00000527253 NXPH3O95157 252 aa7.69□□□□□ -1.18
PRPF40B-204ENST00000527253 OPRK1P41145 380 aa7.69□□□□□ -1.18
PRPF40B-204ENST00000527253 KLF9Q13886 244 aaPredicted RBP7.69□□□□□ -1.18
PRPF40B-204ENST00000527253 TIGITQ495A1 244 aa7.69□□□□□ -1.18
PRPF40B-204ENST00000527253 Q6ZWC4 215 aa7.69□□□□□ -1.18
PRPF40B-204ENST00000527253 FAM24BQ8N5W8 94 aa7.69□□□□□ -1.18
PRPF40B-204ENST00000527253 TRIM63Q969Q1 353 aa7.69□□□□□ -1.18
PRPF40B-204ENST00000527253 RNF183Q96D59 192 aa7.69□□□□□ -1.18
PRPF40B-204ENST00000527253 GALNT14Q96FL9 552 aa7.69□□□□□ -1.18
PRPF40B-204ENST00000527253 MAP6D1Q9H9H5 199 aa7.69□□□□□ -1.18
PRPF40B-204ENST00000527253 KIR2DL5BA0A0G2JN68 375 aa7.68□□□□□ -1.18
PRPF40B-204ENST00000527253 KIR2DL5BA0A0G2JPC4 375 aa7.68□□□□□ -1.18
PRPF40B-204ENST00000527253 A0A0J9YWU9 116 aa7.68□□□□□ -1.18
PRPF40B-204ENST00000527253 CORTO00230 105 aa7.68□□□□□ -1.18
PRPF40B-204ENST00000527253 UBE2CO00762 179 aa7.68□□□□□ -1.18
PRPF40B-204ENST00000527253 IGLC1P0CG04 106 aa7.68□□□□□ -1.18
PRPF40B-204ENST00000527253 HTR2BP41595 481 aa7.68□□□□□ -1.18
PRPF40B-204ENST00000527253 APOC4P55056 127 aa7.68□□□□□ -1.18
PRPF40B-204ENST00000527253 C2orf83Q53S99 150 aa7.68□□□□□ -1.18
PRPF40B-204ENST00000527253 NMSQ5H8A3 153 aa7.68□□□□□ -1.18
PRPF40B-204ENST00000527253 PRSS54Q6PEW0 395 aa7.68□□□□□ -1.18
PRPF40B-204ENST00000527253 LYZL2Q7Z4W2 148 aa7.68□□□□□ -1.18
PRPF40B-204ENST00000527253 KIR2DL5AQ8N109 375 aa7.68□□□□□ -1.18
PRPF40B-204ENST00000527253 KIR2DL5BQ8NHK3 375 aa7.68□□□□□ -1.18
PRPF40B-204ENST00000527253 IL17DQ8TAD2 202 aa7.68□□□□□ -1.18
PRPF40B-204ENST00000527253 IL22RA2Q969J5 263 aa7.68□□□□□ -1.18
PRPF40B-204ENST00000527253 LYSTQ99698 3801 aa7.68□□□□□ -1.18
PRPF40B-204ENST00000527253 GINS3Q9BRX5 216 aa7.68□□□□□ -1.18
PRPF40B-204ENST00000527253 MS4A6AQ9H2W1 248 aa7.68□□□□□ -1.18
PRPF40B-204ENST00000527253 HEYLQ9NQ87 328 aaPredicted RBP7.68□□□□□ -1.18
PRPF40B-204ENST00000527253 SCP2D1Q9UJQ7 156 aa7.68□□□□□ -1.18
PRPF40B-204ENST00000527253 TP53TG1Q9Y2A0 90 aa7.68□□□□□ -1.18
PRPF40B-204ENST00000527253 V9GYH0 126 aa7.68□□□□□ -1.18
PRPF40B-204ENST00000527253 HYDINQ4G0P3 5121 aa7.68□□□□□ -1.18
PRPF40B-204ENST00000527253 CEBPZOSA8MTT3 80 aa7.67□□□□□ -1.18
PRPF40B-204ENST00000527253 NOL3O60936 208 aaKnown RBP7.67□□□□□ -1.18
PRPF40B-204ENST00000527253 AKR1C4P17516 323 aa7.67□□□□□ -1.18
PRPF40B-204ENST00000527253 CRYBB3P26998 211 aa7.67□□□□□ -1.18
PRPF40B-204ENST00000527253 RND2P52198 227 aa7.67□□□□□ -1.18
PRPF40B-204ENST00000527253 RBMS2Q15434 407 aaKnown RBP7.67□□□□□ -1.18
PRPF40B-204ENST00000527253 ZNF79Q15937 498 aa7.67□□□□□ -1.18
PRPF40B-204ENST00000527253 LYG2Q86SG7 212 aa7.67□□□□□ -1.18
PRPF40B-204ENST00000527253 STPG3Q8N7X2 389 aa7.67□□□□□ -1.18
PRPF40B-204ENST00000527253 SLC24A4Q8NFF2 622 aa7.67□□□□□ -1.18
PRPF40B-204ENST00000527253 RBM38Q9H0Z9 239 aaKnown RBP7.67□□□□□ -1.18
PRPF40B-204ENST00000527253 MCUBQ9NWR8 336 aa7.67□□□□□ -1.18
PRPF40B-204ENST00000527253 U3KQE9 123 aa7.67□□□□□ -1.18
PRPF40B-204ENST00000527253 AGRNO00468 2067 aa7.67□□□□□ -1.18
PRPF40B-204ENST00000527253 EPPK1P58107 5090 aaKnown RBP7.67□□□□□ -1.18
PRPF40B-204ENST00000527253 A0A0B4J2A0 478 aa7.66□□□□□ -1.18
PRPF40B-204ENST00000527253 SULT1A3P0DMM9 295 aa7.66□□□□□ -1.18
PRPF40B-204ENST00000527253 SULT1A4P0DMN0 295 aa7.66□□□□□ -1.18
PRPF40B-204ENST00000527253 NPPCP23582 126 aa7.66□□□□□ -1.18
PRPF40B-204ENST00000527253 BMI1P35226 326 aa7.66□□□□□ -1.18
PRPF40B-204ENST00000527253 CMC4P56277 68 aaPredicted RBP7.66□□□□□ -1.18
PRPF40B-204ENST00000527253 DEFB131AP59861 70 aa7.66□□□□□ -1.18
PRPF40B-204ENST00000527253 TNFRSF9Q07011 255 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms