RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 IGHV3-49A0A0A0MS15 119 aa12.01□□□□□ -0.49
CTSB-213ENST00000527215 IGHV7-4-1A0A0J9YVY3 117 aa12.01□□□□□ -0.49
CTSB-213ENST00000527215 AKR1C4P17516 323 aa12.01□□□□□ -0.49
CTSB-213ENST00000527215 FAUP35544 74 aaKnown RBP12.01□□□□□ -0.49
CTSB-213ENST00000527215 SUPT4H1P63272 117 aaKnown RBP12.01□□□□□ -0.49
CTSB-213ENST00000527215 BSXQ3C1V8 233 aa12.01□□□□□ -0.49
CTSB-213ENST00000527215 TOMM5Q8N4H5 51 aa12.01□□□□□ -0.49
CTSB-213ENST00000527215 TMEM116Q8NCL8 245 aa12.01□□□□□ -0.49
CTSB-213ENST00000527215 IL22RA2Q969J5 263 aa12.01□□□□□ -0.49
CTSB-213ENST00000527215 FNDC4Q9H6D8 234 aaPredicted RBP12.01□□□□□ -0.49
CTSB-213ENST00000527215 MRPL36Q9P0J6 103 aaKnown RBP12.01□□□□□ -0.49
CTSB-213ENST00000527215 UBQLN2Q9UHD9 624 aa12.01□□□□□ -0.49
CTSB-213ENST00000527215 CHEK1O14757 476 aa12□□□□□ -0.49
CTSB-213ENST00000527215 NXPH3O95157 252 aa12□□□□□ -0.49
CTSB-213ENST00000527215 TMEM50AO95807 157 aa12□□□□□ -0.49
CTSB-213ENST00000527215 OPRK1P41145 380 aa12□□□□□ -0.49
CTSB-213ENST00000527215 MLANAQ16655 118 aa12□□□□□ -0.49
CTSB-213ENST00000527215 TOMM20LQ6UXN7 152 aa12□□□□□ -0.49
CTSB-213ENST00000527215 RNF2Q99496 336 aa12□□□□□ -0.49
CTSB-213ENST00000527215 RHPN1-AS1Q9BWJ2 59 aa12□□□□□ -0.49
CTSB-213ENST00000527215 HEYLQ9NQ87 328 aaPredicted RBP12□□□□□ -0.49
CTSB-213ENST00000527215 IGHV3OR16-13A0A075B7E8 117 aa11.99□□□□□ -0.49
CTSB-213ENST00000527215 TRAV14DV4A0A0A6YYC5 116 aa11.99□□□□□ -0.49
CTSB-213ENST00000527215 IGHV3-74A0A0B4J1X5 117 aa11.99□□□□□ -0.49
CTSB-213ENST00000527215 CEBPZOSA8MTT3 80 aa11.99□□□□□ -0.49
CTSB-213ENST00000527215 ZNF701M0R085 212 aaPredicted RBP11.99□□□□□ -0.49
CTSB-213ENST00000527215 SULT1A3P0DMM9 295 aa11.99□□□□□ -0.49
CTSB-213ENST00000527215 SULT1A4P0DMN0 295 aa11.99□□□□□ -0.49
CTSB-213ENST00000527215 HTR2BP41595 481 aa11.99□□□□□ -0.49
CTSB-213ENST00000527215 AP3S2P59780 193 aa11.99□□□□□ -0.49
CTSB-213ENST00000527215 ZNF600Q6ZNG1 722 aa11.99□□□□□ -0.49
CTSB-213ENST00000527215 CCDC190Q86UF4 302 aa11.99□□□□□ -0.49
CTSB-213ENST00000527215 GINS3Q9BRX5 216 aa11.99□□□□□ -0.49
CTSB-213ENST00000527215 GGTLC1Q9BX51 225 aa11.99□□□□□ -0.49
CTSB-213ENST00000527215 ZFAND3Q9H8U3 227 aa11.99□□□□□ -0.49
CTSB-213ENST00000527215 STARD9Q9P2P6 4700 aa11.99□□□□□ -0.49
CTSB-213ENST00000527215 LOC102724200A0A096LPH7 203 aaPredicted RBP11.98□□□□□ -0.49
CTSB-213ENST00000527215 OR4C46A6NHA9 309 aa11.98□□□□□ -0.49
CTSB-213ENST00000527215 CLN5O75503 358 aa11.98□□□□□ -0.49
CTSB-213ENST00000527215 ODF3L2Q3SX64 289 aa11.98□□□□□ -0.49
CTSB-213ENST00000527215 TMED4Q7Z7H5 227 aa11.98□□□□□ -0.49
CTSB-213ENST00000527215 PUS1Q9Y606 427 aaKnown RBP eCLIP11.98□□□□□ -0.49
CTSB-213ENST00000527215 A0A0B4J2A0 478 aa11.97□□□□□ -0.49
CTSB-213ENST00000527215 A0A1B0GU03 582 aa11.97□□□□□ -0.49
CTSB-213ENST00000527215 ANXA3P12429 323 aa11.97□□□□□ -0.49
CTSB-213ENST00000527215 SRPXP78539 464 aa11.97□□□□□ -0.49
CTSB-213ENST00000527215 C2orf83Q53S99 150 aa11.97□□□□□ -0.49
CTSB-213ENST00000527215 NMSQ5H8A3 153 aa11.97□□□□□ -0.49
CTSB-213ENST00000527215 ZFAND6Q6FIF0 208 aa11.97□□□□□ -0.49
CTSB-213ENST00000527215 LYZL2Q7Z4W2 148 aa11.97□□□□□ -0.49
CTSB-213ENST00000527215 LGI3Q8N145 548 aa11.97□□□□□ -0.49
CTSB-213ENST00000527215 SLC24A4Q8NFF2 622 aa11.97□□□□□ -0.49
CTSB-213ENST00000527215 OR4X1Q8NH49 305 aa11.97□□□□□ -0.49
CTSB-213ENST00000527215 SHPKQ9UHJ6 478 aa11.97□□□□□ -0.49
CTSB-213ENST00000527215 CSMD3Q7Z407 3707 aa11.96□□□□□ -0.49
CTSB-213ENST00000527215 IGKV3-7A0A075B6H7 116 aa11.96□□□□□ -0.49
CTSB-213ENST00000527215 RPS10-NUDT3A0A1W2PQS6 291 aa11.96□□□□□ -0.49
CTSB-213ENST00000527215 APOHP02749 345 aaPredicted RBP11.96□□□□□ -0.49
CTSB-213ENST00000527215 CCR6P51684 374 aa11.96□□□□□ -0.49
CTSB-213ENST00000527215 SMCO1Q147U7 214 aa11.96□□□□□ -0.49
CTSB-213ENST00000527215 SPANXN2Q5MJ10 180 aa11.96□□□□□ -0.49
CTSB-213ENST00000527215 FAM90A2PQ658T7 463 aa11.96□□□□□ -0.49
CTSB-213ENST00000527215 TMEM170AQ8WVE7 144 aa11.96□□□□□ -0.49
CTSB-213ENST00000527215 ST8SIA2Q92186 375 aa11.96□□□□□ -0.49
CTSB-213ENST00000527215 CACFD1Q9UGQ2 172 aa11.96□□□□□ -0.49
CTSB-213ENST00000527215 IGHV3-66A0A0C4DH42 116 aa11.95□□□□□ -0.5
CTSB-213ENST00000527215 LCE6AA0A183 80 aa11.95□□□□□ -0.5
CTSB-213ENST00000527215 TFPI2P48307 235 aa11.95□□□□□ -0.5
CTSB-213ENST00000527215 TNFRSF9Q07011 255 aa11.95□□□□□ -0.5
CTSB-213ENST00000527215 TMEM128Q5BJH2 165 aa11.95□□□□□ -0.5
CTSB-213ENST00000527215 TCF24Q7RTU0 167 aa11.95□□□□□ -0.5
CTSB-213ENST00000527215 RNASEH2CQ8TDP1 164 aaKnown RBP11.95□□□□□ -0.5
CTSB-213ENST00000527215 DEDD2Q8WXF8 326 aa11.95□□□□□ -0.5
CTSB-213ENST00000527215 SRRQ9GZT4 340 aa11.95□□□□□ -0.5
CTSB-213ENST00000527215 VSIRQ9H7M9 311 aa11.95□□□□□ -0.5
CTSB-213ENST00000527215 TRAV30A0A087WSZ9 112 aa11.94□□□□□ -0.5
CTSB-213ENST00000527215 SCGB2A1O75556 95 aa11.94□□□□□ -0.5
CTSB-213ENST00000527215 IGKV1-17P01599 117 aa11.94□□□□□ -0.5
CTSB-213ENST00000527215 NPY1RP25929 384 aa11.94□□□□□ -0.5
CTSB-213ENST00000527215 BMI1P35226 326 aa11.94□□□□□ -0.5
CTSB-213ENST00000527215 RND2P52198 227 aa11.94□□□□□ -0.5
CTSB-213ENST00000527215 TIGITQ495A1 244 aa11.94□□□□□ -0.5
CTSB-213ENST00000527215 PRSS54Q6PEW0 395 aa11.94□□□□□ -0.5
CTSB-213ENST00000527215 LILRB2Q8N423 598 aa11.94□□□□□ -0.5
CTSB-213ENST00000527215 GBGT1Q8N5D6 347 aa11.94□□□□□ -0.5
CTSB-213ENST00000527215 SLC25A21Q9BQT8 299 aaPredicted RBP11.94□□□□□ -0.5
CTSB-213ENST00000527215 RBKSQ9H477 322 aa11.94□□□□□ -0.5
CTSB-213ENST00000527215 HSPB7Q9UBY9 170 aa11.94□□□□□ -0.5
CTSB-213ENST00000527215 DYNC2H1Q8NCM8 4307 aaKnown RBP11.94□□□□□ -0.5
CTSB-213ENST00000527215 TENM2Q9NT68 2774 aa11.93□□□□□ -0.5
CTSB-213ENST00000527215 SLC25A4P12235 298 aa11.93□□□□□ -0.5
CTSB-213ENST00000527215 VAMP1P23763 118 aa11.93□□□□□ -0.5
CTSB-213ENST00000527215 APOC4P55056 127 aa11.93□□□□□ -0.5
CTSB-213ENST00000527215 APRG1Q8IVJ8 170 aa11.93□□□□□ -0.5
CTSB-213ENST00000527215 OR1S1Q8NH92 325 aa11.93□□□□□ -0.5
CTSB-213ENST00000527215 DTD1Q8TEA8 209 aa11.93□□□□□ -0.5
CTSB-213ENST00000527215 OVOL2Q9BRP0 275 aa11.93□□□□□ -0.5
CTSB-213ENST00000527215 RYR2Q92736 4967 aa11.92□□□□□ -0.5
CTSB-213ENST00000527215 DUXBA0A1W2PPF3 345 aa11.92□□□□□ -0.5
CTSB-213ENST00000527215 DFFBO76075 338 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms