RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 FAM24AA6NFZ4 105 aa8.23□□□□□ -1.09
NEDD8-205ENST00000527046 LINC01619G3V211 115 aa8.23□□□□□ -1.09
NEDD8-205ENST00000527046 H3BP45 60 aa8.23□□□□□ -1.09
NEDD8-205ENST00000527046 SSSCA1O60232 199 aa8.23□□□□□ -1.09
NEDD8-205ENST00000527046 DEDDO75618 318 aa8.23□□□□□ -1.09
NEDD8-205ENST00000527046 SCGB1D2O95969 90 aa8.23□□□□□ -1.09
NEDD8-205ENST00000527046 EDN2P20800 178 aa8.23□□□□□ -1.09
NEDD8-205ENST00000527046 HOXD3P31249 432 aaPredicted RBP8.23□□□□□ -1.09
NEDD8-205ENST00000527046 SPANXN5Q5MJ07 72 aa8.23□□□□□ -1.09
NEDD8-205ENST00000527046 PPP1R1CQ8WVI7 109 aa8.23□□□□□ -1.09
NEDD8-205ENST00000527046 EEF1AKMT3Q96AZ1 226 aa8.23□□□□□ -1.09
NEDD8-205ENST00000527046 CIB3Q96Q77 187 aaPredicted RBP8.23□□□□□ -1.09
NEDD8-205ENST00000527046 ATP6V0BQ99437 205 aa8.23□□□□□ -1.09
NEDD8-205ENST00000527046 TXN2Q99757 166 aa8.23□□□□□ -1.09
NEDD8-205ENST00000527046 MED28Q9H204 178 aa8.23□□□□□ -1.09
NEDD8-205ENST00000527046 ZC4H2Q9NQZ6 224 aa8.23□□□□□ -1.09
NEDD8-205ENST00000527046 OR5AC2Q9NZP5 309 aa8.23□□□□□ -1.09
NEDD8-205ENST00000527046 THYN1Q9P016 225 aa8.23□□□□□ -1.09
NEDD8-205ENST00000527046 LSM5Q9Y4Y9 91 aaKnown RBP8.23□□□□□ -1.09
NEDD8-205ENST00000527046 IGKV1OR2-108A0A075B7D4 117 aa8.22□□□□□ -1.09
NEDD8-205ENST00000527046 OR2T8A6NH00 312 aa8.22□□□□□ -1.09
NEDD8-205ENST00000527046 TGOLN2O43493 480 aa8.22□□□□□ -1.09
NEDD8-205ENST00000527046 TSC22D2O75157 780 aa8.22□□□□□ -1.09
NEDD8-205ENST00000527046 MPC2O95563 127 aa8.22□□□□□ -1.09
NEDD8-205ENST00000527046 IGKV1-17P01599 117 aa8.22□□□□□ -1.09
NEDD8-205ENST00000527046 LYL1P12980 280 aa8.22□□□□□ -1.09
NEDD8-205ENST00000527046 GPR183P32249 361 aa8.22□□□□□ -1.09
NEDD8-205ENST00000527046 GPX4P36969 197 aaPredicted RBP8.22□□□□□ -1.09
NEDD8-205ENST00000527046 GAMTQ14353 236 aa8.22□□□□□ -1.09
NEDD8-205ENST00000527046 TREML4Q6UXN2 200 aa8.22□□□□□ -1.09
NEDD8-205ENST00000527046 GPHB5Q86YW7 130 aa8.22□□□□□ -1.09
NEDD8-205ENST00000527046 TMEM116Q8NCL8 245 aa8.22□□□□□ -1.09
NEDD8-205ENST00000527046 OR4X1Q8NH49 305 aa8.22□□□□□ -1.09
NEDD8-205ENST00000527046 BSCL2Q96G97 398 aaPredicted RBP8.22□□□□□ -1.09
NEDD8-205ENST00000527046 PKD1L1Q8TDX9 2849 aa8.21□□□□□ -1.09
NEDD8-205ENST00000527046 TRRAPQ9Y4A5 3859 aa8.21□□□□□ -1.09
NEDD8-205ENST00000527046 A0A1B0GVG6 124 aa8.21□□□□□ -1.1
NEDD8-205ENST00000527046 IGSF23A1L1A6 192 aa8.21□□□□□ -1.1
NEDD8-205ENST00000527046 CORTO00230 105 aa8.21□□□□□ -1.1
NEDD8-205ENST00000527046 CLN5O75503 358 aa8.21□□□□□ -1.1
NEDD8-205ENST00000527046 LY86O95711 162 aa8.21□□□□□ -1.1
NEDD8-205ENST00000527046 IGLC1P0CG04 106 aa8.21□□□□□ -1.1
NEDD8-205ENST00000527046 ARL3P36405 182 aa8.21□□□□□ -1.1
NEDD8-205ENST00000527046 OPRK1P41145 380 aa8.21□□□□□ -1.1
NEDD8-205ENST00000527046 MFAP4P55083 255 aa8.21□□□□□ -1.1
NEDD8-205ENST00000527046 CYCSP99999 105 aaKnown RBP8.21□□□□□ -1.1
NEDD8-205ENST00000527046 UNQ9165/PRO28630Q6UXU0 137 aa8.21□□□□□ -1.1
NEDD8-205ENST00000527046 TMEM252Q8N6L7 170 aa8.21□□□□□ -1.1
NEDD8-205ENST00000527046 ZNF436Q9C0F3 470 aaPredicted RBP8.21□□□□□ -1.1
NEDD8-205ENST00000527046 STRAPQ9Y3F4 350 aaKnown RBP8.21□□□□□ -1.1
NEDD8-205ENST00000527046 IGHV3-35A0A0C4DH35 117 aa8.2□□□□□ -1.1
NEDD8-205ENST00000527046 GGCTO75223 188 aaKnown RBP8.2□□□□□ -1.1
NEDD8-205ENST00000527046 IFNA4P05014 189 aa8.2□□□□□ -1.1
NEDD8-205ENST00000527046 CSN3P07498 182 aa8.2□□□□□ -1.1
NEDD8-205ENST00000527046 METTL15P1P0C7V9 234 aa8.2□□□□□ -1.1
NEDD8-205ENST00000527046 IGLL1P15814 213 aa8.2□□□□□ -1.1
NEDD8-205ENST00000527046 RND2P52198 227 aa8.2□□□□□ -1.1
NEDD8-205ENST00000527046 SYNJ2BPP57105 145 aa8.2□□□□□ -1.1
NEDD8-205ENST00000527046 LRRC37A5PQ49AS3 106 aa8.2□□□□□ -1.1
NEDD8-205ENST00000527046 FAM209BQ5JX69 171 aa8.2□□□□□ -1.1
NEDD8-205ENST00000527046 ACSM6Q6P461 480 aa8.2□□□□□ -1.1
NEDD8-205ENST00000527046 TMEM182Q6ZP80 229 aaPredicted RBP8.2□□□□□ -1.1
NEDD8-205ENST00000527046 SLC16A13Q7RTY0 426 aa8.2□□□□□ -1.1
NEDD8-205ENST00000527046 CACNG8Q8WXS5 425 aa8.2□□□□□ -1.1
NEDD8-205ENST00000527046 NPIPB3Q92617 1050 aa8.2□□□□□ -1.1
NEDD8-205ENST00000527046 DPF1Q92782 380 aa8.2□□□□□ -1.1
NEDD8-205ENST00000527046 RCC1LQ96I51 464 aaKnown RBP8.2□□□□□ -1.1
NEDD8-205ENST00000527046 LYRM2Q9NU23 88 aaPredicted RBP8.2□□□□□ -1.1
NEDD8-205ENST00000527046 LGALS9O00182 355 aa8.19□□□□□ -1.1
NEDD8-205ENST00000527046 CYB5BO43169 146 aa8.19□□□□□ -1.1
NEDD8-205ENST00000527046 PF4P02776 101 aa8.19□□□□□ -1.1
NEDD8-205ENST00000527046 OR8U8P0C7N1 319 aa8.19□□□□□ -1.1
NEDD8-205ENST00000527046 SLC25A4P12235 298 aa8.19□□□□□ -1.1
NEDD8-205ENST00000527046 ZP3P21754 424 aa8.19□□□□□ -1.1
NEDD8-205ENST00000527046 S100A10P60903 97 aa8.19□□□□□ -1.1
NEDD8-205ENST00000527046 NHLH2Q02577 135 aa8.19□□□□□ -1.1
NEDD8-205ENST00000527046 TIGITQ495A1 244 aa8.19□□□□□ -1.1
NEDD8-205ENST00000527046 Q56UQ5 140 aa8.19□□□□□ -1.1
NEDD8-205ENST00000527046 OXLD1Q5BKU9 147 aa8.19□□□□□ -1.1
NEDD8-205ENST00000527046 SAMD5Q5TGI4 173 aa8.19□□□□□ -1.1
NEDD8-205ENST00000527046 SPSB3Q6PJ21 355 aa8.19□□□□□ -1.1
NEDD8-205ENST00000527046 NOXA1Q86UR1 476 aa8.19□□□□□ -1.1
NEDD8-205ENST00000527046 THAP8Q8NA92 274 aa8.19□□□□□ -1.1
NEDD8-205ENST00000527046 UBAC2Q8NBM4 344 aa8.19□□□□□ -1.1
NEDD8-205ENST00000527046 ZFAND3Q9H8U3 227 aa8.19□□□□□ -1.1
NEDD8-205ENST00000527046 ANK2Q01484 3957 aa8.18□□□□□ -1.1
NEDD8-205ENST00000527046 E5RGE8 158 aa8.18□□□□□ -1.1
NEDD8-205ENST00000527046 OVOL1O14753 267 aa8.18□□□□□ -1.1
NEDD8-205ENST00000527046 WIPF1O43516 503 aa8.18□□□□□ -1.1
NEDD8-205ENST00000527046 CST7O76096 145 aa8.18□□□□□ -1.1
NEDD8-205ENST00000527046 GIPP09681 153 aaPredicted RBP8.18□□□□□ -1.1
NEDD8-205ENST00000527046 C8orf88P0DMB2 117 aa8.18□□□□□ -1.1
NEDD8-205ENST00000527046 P2RY1P47900 373 aa8.18□□□□□ -1.1
NEDD8-205ENST00000527046 NPBWR1P48145 328 aa8.18□□□□□ -1.1
NEDD8-205ENST00000527046 RAB11AP62491 216 aa8.18□□□□□ -1.1
NEDD8-205ENST00000527046 RPEL1Q2QD12 228 aa8.18□□□□□ -1.1
NEDD8-205ENST00000527046 VWC2Q2TAL6 325 aa8.18□□□□□ -1.1
NEDD8-205ENST00000527046 TM4SF20Q53R12 229 aa8.18□□□□□ -1.1
NEDD8-205ENST00000527046 ACOT7LQ6ZUV0 252 aa8.18□□□□□ -1.1
NEDD8-205ENST00000527046 REC114Q7Z4M0 266 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms