RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 C11orf94C9JXX5 98 aa13.64□□□□□ -0.23
CAPN1-206ENST00000526966 ST8SIA3O43173 380 aa13.64□□□□□ -0.23
CAPN1-206ENST00000526966 APOHP02749 345 aaPredicted RBP13.64□□□□□ -0.23
CAPN1-206ENST00000526966 DEFB131AP59861 70 aa13.64□□□□□ -0.23
CAPN1-206ENST00000526966 PHLDA2Q53GA4 152 aa13.64□□□□□ -0.23
CAPN1-206ENST00000526966 TMEM69Q5SWH9 247 aa13.64□□□□□ -0.23
CAPN1-206ENST00000526966 LEMD1Q68G75 181 aa13.64□□□□□ -0.23
CAPN1-206ENST00000526966 LYSMD2Q8IV50 215 aa13.64□□□□□ -0.23
CAPN1-206ENST00000526966 FAM24BQ8N5W8 94 aa13.64□□□□□ -0.23
CAPN1-206ENST00000526966 DNAH17Q9UFH2 4485 aa13.64□□□□□ -0.23
CAPN1-206ENST00000526966 RGS5O15539 181 aa13.63□□□□□ -0.23
CAPN1-206ENST00000526966 S100A5P33763 92 aa13.63□□□□□ -0.23
CAPN1-206ENST00000526966 HRH1P35367 487 aa13.63□□□□□ -0.23
CAPN1-206ENST00000526966 HSPE1P61604 102 aaKnown RBP13.63□□□□□ -0.23
CAPN1-206ENST00000526966 H2BFWTQ7Z2G1 175 aa13.63□□□□□ -0.23
CAPN1-206ENST00000526966 TBC1D26Q86UD7 250 aa13.63□□□□□ -0.23
CAPN1-206ENST00000526966 OR4A16Q8NH70 328 aa13.63□□□□□ -0.23
CAPN1-206ENST00000526966 PINX1Q96BK5 328 aaKnown RBP13.63□□□□□ -0.23
CAPN1-206ENST00000526966 RYR1P21817 5038 aa13.63□□□□□ -0.23
CAPN1-206ENST00000526966 FAM25AB3EWG3 89 aa13.62□□□□□ -0.23
CAPN1-206ENST00000526966 FAM25CB3EWG5 89 aa13.62□□□□□ -0.23
CAPN1-206ENST00000526966 FAM25GB3EWG6 89 aa13.62□□□□□ -0.23
CAPN1-206ENST00000526966 DNASE2O00115 360 aaPredicted RBP13.62□□□□□ -0.23
CAPN1-206ENST00000526966 GIG44P09565 113 aaPredicted RBP13.62□□□□□ -0.23
CAPN1-206ENST00000526966 LPCAT3Q6P1A2 487 aa13.62□□□□□ -0.23
CAPN1-206ENST00000526966 ZNF600Q6ZNG1 722 aa13.62□□□□□ -0.23
CAPN1-206ENST00000526966 PUS1Q9Y606 427 aaKnown RBP eCLIP13.62□□□□□ -0.23
CAPN1-206ENST00000526966 IGLL5B9A064 214 aa13.61□□□□□ -0.23
CAPN1-206ENST00000526966 S100GP29377 79 aa13.61□□□□□ -0.23
CAPN1-206ENST00000526966 PRSS3P35030 304 aa13.61□□□□□ -0.23
CAPN1-206ENST00000526966 NPBWR1P48145 328 aa13.61□□□□□ -0.23
CAPN1-206ENST00000526966 ERHP84090 104 aaKnown RBP13.61□□□□□ -0.23
CAPN1-206ENST00000526966 PVRIGQ6DKI7 326 aa13.61□□□□□ -0.23
CAPN1-206ENST00000526966 TRPT1Q86TN4 253 aaKnown RBP13.61□□□□□ -0.23
CAPN1-206ENST00000526966 DUSP18Q8NEJ0 188 aa13.61□□□□□ -0.23
CAPN1-206ENST00000526966 MRGPRFQ96AM1 343 aa13.61□□□□□ -0.23
CAPN1-206ENST00000526966 IGHV4-28A0A0C4DH34 117 aa13.6□□□□□ -0.23
CAPN1-206ENST00000526966 IGHV3-66A0A0C4DH42 116 aa13.6□□□□□ -0.23
CAPN1-206ENST00000526966 A0A1B0GU03 582 aa13.6□□□□□ -0.23
CAPN1-206ENST00000526966 INS-IGF2F8WCM5 200 aa13.6□□□□□ -0.23
CAPN1-206ENST00000526966 UPK1BO75841 260 aa13.6□□□□□ -0.23
CAPN1-206ENST00000526966 PTTG1O95997 202 aa13.6□□□□□ -0.23
CAPN1-206ENST00000526966 RBMY1A1P0DJD3 496 aaKnown RBP13.6□□□□□ -0.23
CAPN1-206ENST00000526966 RBMY1CP0DJD4 496 aa13.6□□□□□ -0.23
CAPN1-206ENST00000526966 HLA-DMAP28067 261 aa13.6□□□□□ -0.23
CAPN1-206ENST00000526966 RBMY1FQ15415 496 aaKnown RBP13.6□□□□□ -0.23
CAPN1-206ENST00000526966 TMEM41BQ5BJD5 291 aa13.6□□□□□ -0.23
CAPN1-206ENST00000526966 STHQ8IWL8 128 aa13.6□□□□□ -0.23
CAPN1-206ENST00000526966 GPX8Q8TED1 209 aa13.6□□□□□ -0.23
CAPN1-206ENST00000526966 TMEM231Q9H6L2 316 aa13.6□□□□□ -0.23
CAPN1-206ENST00000526966 EXTL2Q9UBQ6 330 aa13.6□□□□□ -0.23
CAPN1-206ENST00000526966 ZNF705EA8MWA4 302 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-206ENST00000526966 TMEM50AO95807 157 aa13.59□□□□□ -0.23
CAPN1-206ENST00000526966 MIFP14174 115 aa13.59□□□□□ -0.23
CAPN1-206ENST00000526966 TNFSF8P32971 234 aa13.59□□□□□ -0.23
CAPN1-206ENST00000526966 UCP3P55916 312 aa13.59□□□□□ -0.23
CAPN1-206ENST00000526966 DIRAS2Q96HU8 199 aa13.59□□□□□ -0.23
CAPN1-206ENST00000526966 CCDC32Q9BV29 185 aa13.59□□□□□ -0.23
CAPN1-206ENST00000526966 RABL2AQ9UBK7 228 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-206ENST00000526966 RABL2BQ9UNT1 228 aa13.59□□□□□ -0.23
CAPN1-206ENST00000526966 K7EQG2 157 aa13.58□□□□□ -0.24
CAPN1-206ENST00000526966 SPP1P10451 314 aa13.58□□□□□ -0.24
CAPN1-206ENST00000526966 C4BPBP20851 252 aa13.58□□□□□ -0.24
CAPN1-206ENST00000526966 HLA-DMBP28068 263 aa13.58□□□□□ -0.24
CAPN1-206ENST00000526966 DEFA1P59665 94 aa13.58□□□□□ -0.24
CAPN1-206ENST00000526966 DEFA3P59666 94 aa13.58□□□□□ -0.24
CAPN1-206ENST00000526966 TSPAN5P62079 268 aa13.58□□□□□ -0.24
CAPN1-206ENST00000526966 RPL11P62913 178 aaKnown RBP13.58□□□□□ -0.24
CAPN1-206ENST00000526966 MORN3Q6PF18 240 aaPredicted RBP13.58□□□□□ -0.24
CAPN1-206ENST00000526966 C15orf40Q8WUR7 153 aa13.58□□□□□ -0.24
CAPN1-206ENST00000526966 GRAMD2BQ96HH9 432 aa13.58□□□□□ -0.24
CAPN1-206ENST00000526966 SOSTQ9BQB4 213 aa13.58□□□□□ -0.24
CAPN1-206ENST00000526966 RABAC1Q9UI14 185 aa13.58□□□□□ -0.24
CAPN1-206ENST00000526966 X6R8D5 127 aa13.58□□□□□ -0.24
CAPN1-206ENST00000526966 P0C879 139 aa13.57□□□□□ -0.24
CAPN1-206ENST00000526966 IZUMO4Q1ZYL8 232 aa13.57□□□□□ -0.24
CAPN1-206ENST00000526966 SPINK9Q5DT21 86 aa13.57□□□□□ -0.24
CAPN1-206ENST00000526966 Q6ZTC4 211 aa13.57□□□□□ -0.24
CAPN1-206ENST00000526966 ZBTB8BQ8NAP8 495 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-206ENST00000526966 CHAC2Q8WUX2 184 aa13.57□□□□□ -0.24
CAPN1-206ENST00000526966 DYNC1H1Q14204 4646 aaKnown RBP13.57□□□□□ -0.24
CAPN1-206ENST00000526966 IGHV4-4A0A075B6R2 117 aa13.56□□□□□ -0.24
CAPN1-206ENST00000526966 TRAV10A0A0B4J240 114 aa13.56□□□□□ -0.24
CAPN1-206ENST00000526966 A0A1W2PS18 150 aa13.56□□□□□ -0.24
CAPN1-206ENST00000526966 CORTO00230 105 aa13.56□□□□□ -0.24
CAPN1-206ENST00000526966 IGKV1-5P01602 117 aa13.56□□□□□ -0.24
CAPN1-206ENST00000526966 RNASE2P10153 161 aaKnown RBP13.56□□□□□ -0.24
CAPN1-206ENST00000526966 NPPCP23582 126 aa13.56□□□□□ -0.24
CAPN1-206ENST00000526966 CRYBB3P26998 211 aa13.56□□□□□ -0.24
CAPN1-206ENST00000526966 SNCAP37840 140 aa13.56□□□□□ -0.24
CAPN1-206ENST00000526966 SPANXN2Q5MJ10 180 aa13.56□□□□□ -0.24
CAPN1-206ENST00000526966 LINC00336Q6ZUF6 198 aa13.56□□□□□ -0.24
CAPN1-206ENST00000526966 CCDC190Q86UF4 302 aa13.56□□□□□ -0.24
CAPN1-206ENST00000526966 SCPEP1Q9HB40 452 aa13.56□□□□□ -0.24
CAPN1-206ENST00000526966 MRPL36Q9P0J6 103 aaKnown RBP13.56□□□□□ -0.24
CAPN1-206ENST00000526966 DNAH11Q96DT5 4516 aa13.55□□□□□ -0.24
CAPN1-206ENST00000526966 ELOA3CA0A087WX78 387 aaPredicted RBP13.55□□□□□ -0.24
CAPN1-206ENST00000526966 CLN5O75503 358 aa13.55□□□□□ -0.24
CAPN1-206ENST00000526966 RND3P61587 244 aa13.55□□□□□ -0.24
CAPN1-206ENST00000526966 SLC35G3Q8N808 338 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms