RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 RAB40CQ96S21 281 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 SPIN2AQ99865 258 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 SPIN2BQ9BPZ2 258 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 AGMATQ9BSE5 352 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 C1orf43Q9BWL3 253 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 TMEM126AQ9H061 195 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 PIGLQ9Y2B2 252 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 GAGE10A6NGK3 116 aa9.16□□□□□ -0.94
VPS11-202ENST00000526829 NKX2-1P43699 371 aaPredicted RBP9.16□□□□□ -0.94
VPS11-202ENST00000526829 DYNLT3P51808 116 aa9.16□□□□□ -0.94
VPS11-202ENST00000526829 OR8B8Q15620 311 aa9.16□□□□□ -0.94
VPS11-202ENST00000526829 CRIP3Q6Q6R5 217 aa9.16□□□□□ -0.94
VPS11-202ENST00000526829 ZNF66Q6ZN08 573 aa9.16□□□□□ -0.94
VPS11-202ENST00000526829 C1QL2Q7Z5L3 287 aa9.16□□□□□ -0.94
VPS11-202ENST00000526829 ZNF525Q8N782 197 aa9.16□□□□□ -0.94
VPS11-202ENST00000526829 SRSF8Q9BRL6 282 aaKnown RBP9.16□□□□□ -0.94
VPS11-202ENST00000526829 C1QTNF4Q9BXJ3 329 aa9.16□□□□□ -0.94
VPS11-202ENST00000526829 SIRPDQ9H106 197 aa9.16□□□□□ -0.94
VPS11-202ENST00000526829 GNG13Q9P2W3 67 aa9.16□□□□□ -0.94
VPS11-202ENST00000526829 HEATR1Q9H583 2144 aaKnown RBP9.16□□□□□ -0.94
VPS11-202ENST00000526829 MAP1LC3B2A6NCE7 125 aa9.15□□□□□ -0.94
VPS11-202ENST00000526829 ANKRD30BLA7E2S9 258 aa9.15□□□□□ -0.94
VPS11-202ENST00000526829 ACTL6BO94805 426 aa9.15□□□□□ -0.94
VPS11-202ENST00000526829 MDKP21741 143 aaPredicted RBP9.15□□□□□ -0.94
VPS11-202ENST00000526829 GPM6AP51674 278 aa9.15□□□□□ -0.94
VPS11-202ENST00000526829 ZNF121P58317 390 aaPredicted RBP9.15□□□□□ -0.94
VPS11-202ENST00000526829 MZT1Q08AG7 82 aa9.15□□□□□ -0.94
VPS11-202ENST00000526829 OR5C1Q8NGR4 320 aa9.15□□□□□ -0.94
VPS11-202ENST00000526829 OR2AJ1Q8NGZ0 328 aa9.15□□□□□ -0.94
VPS11-202ENST00000526829 OR4F5Q8NH21 305 aa9.15□□□□□ -0.94
VPS11-202ENST00000526829 C10orf105Q8TEF2 133 aa9.15□□□□□ -0.94
VPS11-202ENST00000526829 MBD3L1Q8WWY6 194 aa9.15□□□□□ -0.94
VPS11-202ENST00000526829 MAP1LC3BQ9GZQ8 125 aa9.15□□□□□ -0.94
VPS11-202ENST00000526829 LRP5LA4QPB2 252 aa9.15□□□□□ -0.95
VPS11-202ENST00000526829 ZNF850A8MQ14 1090 aa9.15□□□□□ -0.95
VPS11-202ENST00000526829 NPIPB5A8MRT5 1133 aa9.15□□□□□ -0.95
VPS11-202ENST00000526829 HMGB3O15347 200 aaKnown RBP9.15□□□□□ -0.95
VPS11-202ENST00000526829 NPY1RP25929 384 aa9.15□□□□□ -0.95
VPS11-202ENST00000526829 SRSF2Q01130 221 aaKnown RBP9.15□□□□□ -0.95
VPS11-202ENST00000526829 ACTL10Q5JWF8 245 aa9.15□□□□□ -0.95
VPS11-202ENST00000526829 C6orf201Q7Z4U5 140 aa9.15□□□□□ -0.95
VPS11-202ENST00000526829 TMEM123Q8N131 208 aa9.15□□□□□ -0.95
VPS11-202ENST00000526829 ZIC4Q8N9L1 334 aa9.15□□□□□ -0.95
VPS11-202ENST00000526829 OCC1Q8TAD7 63 aa9.15□□□□□ -0.95
VPS11-202ENST00000526829 Q96M66 194 aa9.15□□□□□ -0.95
VPS11-202ENST00000526829 ATP5SQ99766 215 aa9.15□□□□□ -0.95
VPS11-202ENST00000526829 KCNS2Q9ULS6 477 aa9.15□□□□□ -0.95
VPS11-202ENST00000526829 LHFPL6Q9Y693 200 aa9.15□□□□□ -0.95
VPS11-202ENST00000526829 ARFGEF3Q5TH69 2177 aa9.14□□□□□ -0.95
VPS11-202ENST00000526829 A0A1W2PRX2 142 aa9.14□□□□□ -0.95
VPS11-202ENST00000526829 OR2T8A6NH00 312 aa9.14□□□□□ -0.95
VPS11-202ENST00000526829 F5H5K5 113 aa9.14□□□□□ -0.95
VPS11-202ENST00000526829 PHF1O43189 567 aaPredicted RBP9.14□□□□□ -0.95
VPS11-202ENST00000526829 TIMM8AO60220 97 aaPredicted RBP9.14□□□□□ -0.95
VPS11-202ENST00000526829 GUCA1AP43080 201 aaPredicted RBP9.14□□□□□ -0.95
VPS11-202ENST00000526829 RPS16P62249 146 aaKnown RBP9.14□□□□□ -0.95
VPS11-202ENST00000526829 PHLDA2Q53GA4 152 aa9.14□□□□□ -0.95
VPS11-202ENST00000526829 KCNIP4Q6PIL6 250 aa9.14□□□□□ -0.95
VPS11-202ENST00000526829 C16orf82Q7Z2V1 217 aa9.14□□□□□ -0.95
VPS11-202ENST00000526829 OR5AN1Q8NGI8 311 aa9.14□□□□□ -0.95
VPS11-202ENST00000526829 OR51G1Q8NGK1 321 aa9.14□□□□□ -0.95
VPS11-202ENST00000526829 IL22RA2Q969J5 263 aa9.14□□□□□ -0.95
VPS11-202ENST00000526829 ST6GALNAC6Q969X2 333 aa9.14□□□□□ -0.95
VPS11-202ENST00000526829 OXGR1Q96P68 337 aa9.14□□□□□ -0.95
VPS11-202ENST00000526829 HDHD3Q9BSH5 251 aaPredicted RBP9.14□□□□□ -0.95
VPS11-202ENST00000526829 NPVFQ9HCQ7 196 aa9.14□□□□□ -0.95
VPS11-202ENST00000526829 MED29Q9NX70 200 aa9.14□□□□□ -0.95
VPS11-202ENST00000526829 OR1A1Q9P1Q5 309 aa9.14□□□□□ -0.95
VPS11-202ENST00000526829 DUXBA0A1W2PPF3 345 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 GAGE12JA6NER3 117 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 FABP5P3A8MUU1 101 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 GAGE7O76087 117 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 GAGE12FP0CL80 117 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 GAGE12GP0CL81 117 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 GAGE12IP0CL82 117 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 EDN2P20800 178 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 GALR1P47211 349 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 CNN1P51911 297 aaKnown RBP9.13□□□□□ -0.95
VPS11-202ENST00000526829 RELBQ01201 579 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 GAGE4Q13068 117 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 C3orf36Q3SXR2 165 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 CYP2G1PQ6ZSU1 146 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 ODF3L1Q8IXM7 274 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 ZNF709Q8N972 641 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 OR5A1Q8NGJ0 315 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 C19orf24Q9BVV8 132 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 NPFFR1Q9GZQ6 430 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 FNDC4Q9H6D8 234 aaPredicted RBP9.13□□□□□ -0.95
VPS11-202ENST00000526829 ZNF561-AS1K7EIQ3 104 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 HRASP01112 189 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 IGLV3-1P01715 115 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 IGHV4-31P0DP07 118 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 CLDN17P56750 224 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 TIRAPP58753 221 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 FXYD4P59646 89 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 GRB2P62993 217 aaKnown RBP9.13□□□□□ -0.95
VPS11-202ENST00000526829 RPL24P83731 157 aaKnown RBP9.13□□□□□ -0.95
VPS11-202ENST00000526829 POU3F1Q03052 451 aaPredicted RBP9.13□□□□□ -0.95
VPS11-202ENST00000526829 SPATA45Q537H7 98 aa9.13□□□□□ -0.95
VPS11-202ENST00000526829 LCNL1Q6ZST4 164 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms