RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, human

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF1-208	ENST00000526821	OR2T10	Q8NGZ9	312 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	TMED6	Q8WW62	240 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	GGACT	Q9BVM4	153 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	PLEKHA3	Q9HB20	300 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	METTL1	Q9UBP6	276 aa	Known RBP	4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	PRRC2A	P48634	2157 aa	Known RBP	4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	CCDC168	Q8NDH2	2452 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	AKAP9	Q99996	3911 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	TRAV40	A0A0B4J280	105 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821		A0A1W2PN81	502 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	IGLC7	A0M8Q6	106 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	TEX22	C9J3V5	150 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	FNDC10	F2Z333	226 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	IFNA10	P01566	189 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	OPN1MW	P04001	364 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	FAM106CP	P0CH98	169 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	OPN1MW2	P0DN77	364 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	OPN1MW3	P0DN78	364 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	CD24	P25063	80 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	NPY1R	P25929	384 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	ATP6V0C	P27449	155 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	BRS3	P32247	399 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	CHRNA7	P36544	502 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	SULT1A2	P50226	295 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	BPIFB3	P59826	476 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	HNF4G	Q14541	408 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	MMD	Q15546	238 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	TWIST1	Q15672	202 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	C5orf64	Q2M2E5	130 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	LRRC75B	Q2VPJ9	315 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	FAM74A1	Q5RGS3	127 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	FAM120AOS	Q5T036	256 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	RUSC1-AS1	Q66K80	236 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	EIF5AL1	Q6IS14	154 aa	Known RBP	4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	C11orf44	Q8N8P7	122 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	ZNF114	Q8NC26	417 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	SLC24A4	Q8NFF2	622 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	OR10P1	Q8NGE3	313 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	OR10W1	Q8NGF6	305 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	LRRC20	Q8TCA0	184 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	PIFO	Q8TCI5	191 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	PINX1	Q96BK5	328 aa	Known RBP	4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	GNPNAT1	Q96EK6	184 aa	Predicted RBP	4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	CLCC1	Q96S66	551 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	FOXC2	Q99958	501 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	SRSF8	Q9BRL6	282 aa	Known RBP	4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	TMEM147	Q9BVK8	224 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	WDR61	Q9GZS3	305 aa	Known RBP	4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	SH3BGRL3	Q9H299	93 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	FBXL15	Q9H469	300 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	ENY2	Q9NPA8	101 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	MED9	Q9NWA0	146 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	CR1	P17927	2039 aa		4.85	□□□□□ -1.63
ATPAF1-208	ENST00000526821	IGHV3OR16-10	A0A075B7F0	116 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821		A0A0U1RQK1	487 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	TGFA	P01135	160 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	IFNA5	P01569	189 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	TMEM11	P17152	192 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	CTRB1	P17538	263 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	RPL27A	P46776	148 aa	Known RBP	4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	RAB14	P61106	215 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	RAB11A	P62491	216 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	DLK1	P80370	383 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	ERH	P84090	104 aa	Known RBP	4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	RUNX1	Q01196	453 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	HES1	Q14469	280 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	TNXA	Q16473	311 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	AANAT	Q16613	207 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	C10orf25	Q5T742	122 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	CTRB2	Q6GPI1	263 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	OR8G2P	Q6IF36	304 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	ZNF562	Q6V9R5	426 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	BRD3OS	Q6XYD6	125 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	C9orf139	Q6ZV77	190 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	CCDC28A	Q8IWP9	274 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821		Q8N9W7	124 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	HSD17B11	Q8NBQ5	300 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	MAPK1IP1L	Q8NDC0	245 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	WFDC11	Q8NEX6	87 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	OR2G3	Q8NGZ4	309 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	PCNP	Q8WW12	178 aa	Known RBP	4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	SRSF12	Q8WXF0	261 aa	Known RBP	4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	TAF15	Q92804	592 aa	Known RBP eCLIP	4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	SAT2	Q96F10	170 aa	Predicted RBP	4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	P2RX4	Q99571	388 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	PSMG3	Q9BT73	122 aa	Predicted RBP	4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	HINT2	Q9BX68	163 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	UQCC1	Q9NVA1	299 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	KIAA1456	Q9P272	454 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	WDR83OS	Q9Y284	106 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	LSM4	Q9Y4Z0	139 aa	Known RBP	4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	TIMM9	Q9Y5J7	89 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	RFNG	Q9Y644	331 aa		4.84	□□□□□ -1.63
ATPAF1-208	ENST00000526821	NAV3	Q8IVL0	2385 aa		4.84	□□□□□ -1.64
ATPAF1-208	ENST00000526821	PLXNB1	O43157	2135 aa		4.84	□□□□□ -1.64
ATPAF1-208	ENST00000526821	CSPG4	Q6UVK1	2322 aa		4.83	□□□□□ -1.64
ATPAF1-208	ENST00000526821	UMAD1	C9J7I0	102 aa		4.83	□□□□□ -1.64
ATPAF1-208	ENST00000526821	TRIM77	I1YAP6	450 aa		4.83	□□□□□ -1.64
ATPAF1-208	ENST00000526821	ACTL6B	O94805	426 aa		4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms