RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 SLC24A4Q8NFF2 622 aa12.28□□□□□ -0.44
SSSCA1-202ENST00000526433 OR2K2Q8NGT1 345 aa12.28□□□□□ -0.44
SSSCA1-202ENST00000526433 CACNG8Q8WXS5 425 aa12.28□□□□□ -0.44
SSSCA1-202ENST00000526433 FNDC4Q9H6D8 234 aaPredicted RBP12.28□□□□□ -0.44
SSSCA1-202ENST00000526433 TECRQ9NZ01 308 aaKnown RBP12.28□□□□□ -0.44
SSSCA1-202ENST00000526433 UFC1Q9Y3C8 167 aa12.28□□□□□ -0.44
SSSCA1-202ENST00000526433 TMEM50AO95807 157 aa12.27□□□□□ -0.45
SSSCA1-202ENST00000526433 C8orf88P0DMB2 117 aa12.27□□□□□ -0.45
SSSCA1-202ENST00000526433 OPRK1P41145 380 aa12.27□□□□□ -0.45
SSSCA1-202ENST00000526433 CD300EQ496F6 205 aaPredicted RBP12.27□□□□□ -0.45
SSSCA1-202ENST00000526433 LCN12Q6JVE5 192 aa12.27□□□□□ -0.45
SSSCA1-202ENST00000526433 COQ8AQ8NI60 647 aa12.27□□□□□ -0.45
SSSCA1-202ENST00000526433 DTD1Q8TEA8 209 aa12.27□□□□□ -0.45
SSSCA1-202ENST00000526433 TMEM170AQ8WVE7 144 aa12.27□□□□□ -0.45
SSSCA1-202ENST00000526433 TMEM190Q8WZ59 177 aa12.27□□□□□ -0.45
SSSCA1-202ENST00000526433 C20orf85Q9H1P6 137 aa12.27□□□□□ -0.45
SSSCA1-202ENST00000526433 U3KQ87 197 aa12.27□□□□□ -0.45
SSSCA1-202ENST00000526433 TRAV6A0A075B6T7 132 aa12.26□□□□□ -0.45
SSSCA1-202ENST00000526433 FAM240BA0A1B0GVZ2 78 aa12.26□□□□□ -0.45
SSSCA1-202ENST00000526433 ADAP1O75689 374 aa12.26□□□□□ -0.45
SSSCA1-202ENST00000526433 IFNA10P01566 189 aa12.26□□□□□ -0.45
SSSCA1-202ENST00000526433 NPY1RP25929 384 aa12.26□□□□□ -0.45
SSSCA1-202ENST00000526433 RELQ04864 619 aaPredicted RBP12.26□□□□□ -0.45
SSSCA1-202ENST00000526433 MZT2BQ6NZ67 158 aa12.26□□□□□ -0.45
SSSCA1-202ENST00000526433 NOXA1Q86UR1 476 aa12.26□□□□□ -0.45
SSSCA1-202ENST00000526433 Q8N1Y9 231 aa12.26□□□□□ -0.45
SSSCA1-202ENST00000526433 MARC2Q969Z3 335 aa12.26□□□□□ -0.45
SSSCA1-202ENST00000526433 ZNF414Q96IQ9 312 aa12.26□□□□□ -0.45
SSSCA1-202ENST00000526433 C20orf24Q9BUV8 137 aa12.26□□□□□ -0.45
SSSCA1-202ENST00000526433 MRPL36Q9P0J6 103 aaKnown RBP12.26□□□□□ -0.45
SSSCA1-202ENST00000526433 MRPL27Q9P0M9 148 aaKnown RBP12.26□□□□□ -0.45
SSSCA1-202ENST00000526433 TBC1D24Q9ULP9 559 aa12.26□□□□□ -0.45
SSSCA1-202ENST00000526433 SELENOKQ9Y6D0 94 aa12.26□□□□□ -0.45
SSSCA1-202ENST00000526433 SMAD5-AS1Q9Y6J3 95 aa12.26□□□□□ -0.45
SSSCA1-202ENST00000526433 IGHV3OR16-8A0A075B7F1 116 aa12.25□□□□□ -0.45
SSSCA1-202ENST00000526433 ZNF785A8K8V0 405 aa12.25□□□□□ -0.45
SSSCA1-202ENST00000526433 FAM90A26D6RGX4 464 aa12.25□□□□□ -0.45
SSSCA1-202ENST00000526433 K7EMT4 169 aa12.25□□□□□ -0.45
SSSCA1-202ENST00000526433 UPK1BO75841 260 aa12.25□□□□□ -0.45
SSSCA1-202ENST00000526433 ASAH1Q13510 395 aa12.25□□□□□ -0.45
SSSCA1-202ENST00000526433 OR52B4Q8NGK2 314 aa12.25□□□□□ -0.45
SSSCA1-202ENST00000526433 OR4X1Q8NH49 305 aa12.25□□□□□ -0.45
SSSCA1-202ENST00000526433 RNASEH2CQ8TDP1 164 aaKnown RBP12.25□□□□□ -0.45
SSSCA1-202ENST00000526433 MLXQ9UH92 298 aa12.25□□□□□ -0.45
SSSCA1-202ENST00000526433 RPS10-NUDT3A0A1W2PQS6 291 aa12.24□□□□□ -0.45
SSSCA1-202ENST00000526433 ZNF207O43670 478 aaKnown RBP12.24□□□□□ -0.45
SSSCA1-202ENST00000526433 CLN5O75503 358 aa12.24□□□□□ -0.45
SSSCA1-202ENST00000526433 MED6O75586 246 aa12.24□□□□□ -0.45
SSSCA1-202ENST00000526433 YIF1AO95070 293 aa12.24□□□□□ -0.45
SSSCA1-202ENST00000526433 IFNA21P01568 189 aa12.24□□□□□ -0.45
SSSCA1-202ENST00000526433 H2AFB2P0C5Z0 115 aa12.24□□□□□ -0.45
SSSCA1-202ENST00000526433 ATP5IP56385 69 aaPredicted RBP12.24□□□□□ -0.45
SSSCA1-202ENST00000526433 IFITM3Q01628 133 aa12.24□□□□□ -0.45
SSSCA1-202ENST00000526433 CD69Q07108 199 aa12.24□□□□□ -0.45
SSSCA1-202ENST00000526433 MITD1Q8WV92 249 aa12.24□□□□□ -0.45
SSSCA1-202ENST00000526433 B9D2Q9BPU9 175 aa12.24□□□□□ -0.45
SSSCA1-202ENST00000526433 MAGT1Q9H0U3 335 aa12.24□□□□□ -0.45
SSSCA1-202ENST00000526433 DAZ1Q9NQZ3 744 aaKnown RBP12.24□□□□□ -0.45
SSSCA1-202ENST00000526433 NUDT15Q9NV35 164 aa12.24□□□□□ -0.45
SSSCA1-202ENST00000526433 C15orf62A8K5M9 175 aa12.23□□□□□ -0.45
SSSCA1-202ENST00000526433 MPTX1A8MV57 137 aa12.23□□□□□ -0.45
SSSCA1-202ENST00000526433 IAPPP10997 89 aa12.23□□□□□ -0.45
SSSCA1-202ENST00000526433 GUCA2BQ16661 112 aa12.23□□□□□ -0.45
SSSCA1-202ENST00000526433 PRSS54Q6PEW0 395 aa12.23□□□□□ -0.45
SSSCA1-202ENST00000526433 WDR89Q96FK6 387 aaPredicted RBP12.23□□□□□ -0.45
SSSCA1-202ENST00000526433 TRAV30A0A087WSZ9 112 aa12.22□□□□□ -0.45
SSSCA1-202ENST00000526433 SYNGR2O43760 224 aa12.22□□□□□ -0.45
SSSCA1-202ENST00000526433 IFNA4P05014 189 aa12.22□□□□□ -0.45
SSSCA1-202ENST00000526433 SLC25A4P12235 298 aa12.22□□□□□ -0.45
SSSCA1-202ENST00000526433 ID3Q02535 119 aa12.22□□□□□ -0.45
SSSCA1-202ENST00000526433 ETFRF1Q6IPR1 90 aa12.22□□□□□ -0.45
SSSCA1-202ENST00000526433 BTNL8Q6UX41 500 aa12.22□□□□□ -0.45
SSSCA1-202ENST00000526433 TOMM20LQ6UXN7 152 aa12.22□□□□□ -0.45
SSSCA1-202ENST00000526433 ZNF600Q6ZNG1 722 aa12.22□□□□□ -0.45
SSSCA1-202ENST00000526433 TMEM61Q8N0U2 210 aa12.22□□□□□ -0.45
SSSCA1-202ENST00000526433 OR10C1Q96KK4 312 aa12.22□□□□□ -0.45
SSSCA1-202ENST00000526433 SMPXQ9UHP9 88 aa12.22□□□□□ -0.45
SSSCA1-202ENST00000526433 COL7A1Q02388 2944 aa12.21□□□□□ -0.45
SSSCA1-202ENST00000526433 WRBO00258 174 aa12.21□□□□□ -0.45
SSSCA1-202ENST00000526433 RND2P52198 227 aa12.21□□□□□ -0.45
SSSCA1-202ENST00000526433 TIGITQ495A1 244 aa12.21□□□□□ -0.45
SSSCA1-202ENST00000526433 GTSCR1Q86UQ5 136 aa12.21□□□□□ -0.45
SSSCA1-202ENST00000526433 TMEM116Q8NCL8 245 aa12.21□□□□□ -0.45
SSSCA1-202ENST00000526433 ZNF431Q8TF32 576 aaPredicted RBP12.21□□□□□ -0.45
SSSCA1-202ENST00000526433 CIB3Q96Q77 187 aaPredicted RBP12.21□□□□□ -0.45
SSSCA1-202ENST00000526433 SEC22CQ9BRL7 303 aa12.21□□□□□ -0.45
SSSCA1-202ENST00000526433 TRAV14DV4A0A0A6YYC5 116 aa12.2□□□□□ -0.46
SSSCA1-202ENST00000526433 TRAV25A0A0B4J276 109 aa12.2□□□□□ -0.46
SSSCA1-202ENST00000526433 IGHV7-4-1A0A0J9YVY3 117 aa12.2□□□□□ -0.46
SSSCA1-202ENST00000526433 SCAF4O95104 1147 aaKnown RBP12.2□□□□□ -0.46
SSSCA1-202ENST00000526433 IGKV1-17P01599 117 aa12.2□□□□□ -0.46
SSSCA1-202ENST00000526433 GPX4P36969 197 aaPredicted RBP12.2□□□□□ -0.46
SSSCA1-202ENST00000526433 RAB11AP62491 216 aa12.2□□□□□ -0.46
SSSCA1-202ENST00000526433 RBPMS2Q6ZRY4 209 aaKnown RBP12.2□□□□□ -0.46
SSSCA1-202ENST00000526433 OR4D5Q8NGN0 318 aa12.2□□□□□ -0.46
SSSCA1-202ENST00000526433 NPIPB3Q92617 1050 aa12.2□□□□□ -0.46
SSSCA1-202ENST00000526433 ASCL2Q99929 193 aa12.2□□□□□ -0.46
SSSCA1-202ENST00000526433 PUS1Q9Y606 427 aaKnown RBP eCLIP12.2□□□□□ -0.46
SSSCA1-202ENST00000526433 IGHV3-49A0A0A0MS15 119 aa12.19□□□□□ -0.46
SSSCA1-202ENST00000526433 SCGB2A1O75556 95 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms