RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 DUSP18Q8NEJ0 188 aa10.42□□□□□ -0.74
CPSF1-201ENST00000526271 GALNT14Q96FL9 552 aa10.42□□□□□ -0.74
CPSF1-201ENST00000526271 SRSF8Q9BRL6 282 aaKnown RBP10.42□□□□□ -0.74
CPSF1-201ENST00000526271 SMPXQ9UHP9 88 aa10.42□□□□□ -0.74
CPSF1-201ENST00000526271 APLNQ9ULZ1 77 aa10.42□□□□□ -0.74
CPSF1-201ENST00000526271 C14orf166Q9Y224 244 aaKnown RBP10.42□□□□□ -0.74
CPSF1-201ENST00000526271 NSG2Q9Y328 171 aa10.42□□□□□ -0.74
CPSF1-201ENST00000526271 A0A1B0GVY2 172 aa10.41□□□□□ -0.74
CPSF1-201ENST00000526271 FAM240BA0A1B0GVZ2 78 aa10.41□□□□□ -0.74
CPSF1-201ENST00000526271 CHEK1O14757 476 aa10.41□□□□□ -0.74
CPSF1-201ENST00000526271 TCRBP04435 133 aa10.41□□□□□ -0.74
CPSF1-201ENST00000526271 RLN1P04808 185 aa10.41□□□□□ -0.74
CPSF1-201ENST00000526271 NQO2P16083 231 aa10.41□□□□□ -0.74
CPSF1-201ENST00000526271 F2RP25116 425 aa10.41□□□□□ -0.74
CPSF1-201ENST00000526271 S100GP29377 79 aa10.41□□□□□ -0.74
CPSF1-201ENST00000526271 DHODHQ02127 395 aa10.41□□□□□ -0.74
CPSF1-201ENST00000526271 CATR1Q13166 79 aa10.41□□□□□ -0.74
CPSF1-201ENST00000526271 TBC1D26Q86UD7 250 aa10.41□□□□□ -0.74
CPSF1-201ENST00000526271 FAM24BQ8N5W8 94 aa10.41□□□□□ -0.74
CPSF1-201ENST00000526271 CCDC71LQ8N9Z2 235 aa10.41□□□□□ -0.74
CPSF1-201ENST00000526271 OR51H1Q8NH63 302 aa10.41□□□□□ -0.74
CPSF1-201ENST00000526271 TMEM230Q96A57 120 aa10.41□□□□□ -0.74
CPSF1-201ENST00000526271 BSCL2Q96G97 398 aaPredicted RBP10.41□□□□□ -0.74
CPSF1-201ENST00000526271 C20orf24Q9BUV8 137 aa10.41□□□□□ -0.74
CPSF1-201ENST00000526271 FAM212BQ9NTI7 297 aaPredicted RBP10.41□□□□□ -0.74
CPSF1-201ENST00000526271 C21orf62Q9NYP8 219 aa10.41□□□□□ -0.74
CPSF1-201ENST00000526271 F11RQ9Y624 299 aaKnown RBP10.41□□□□□ -0.74
CPSF1-201ENST00000526271 IGHV3OR16-13A0A075B7E8 117 aa10.4□□□□□ -0.74
CPSF1-201ENST00000526271 IGHV3-74A0A0B4J1X5 117 aa10.4□□□□□ -0.74
CPSF1-201ENST00000526271 CRYM-AS1A6NIL9 109 aa10.4□□□□□ -0.74
CPSF1-201ENST00000526271 APOHP02749 345 aaPredicted RBP10.4□□□□□ -0.74
CPSF1-201ENST00000526271 FGF2P09038 288 aa10.4□□□□□ -0.74
CPSF1-201ENST00000526271 SLC25A24Q6NUK1 477 aa10.4□□□□□ -0.74
CPSF1-201ENST00000526271 NRARPQ7Z6K4 114 aa10.4□□□□□ -0.74
CPSF1-201ENST00000526271 GATAD1Q8WUU5 269 aa10.4□□□□□ -0.74
CPSF1-201ENST00000526271 COMMD5Q9GZQ3 224 aa10.4□□□□□ -0.74
CPSF1-201ENST00000526271 CSTL1Q9H114 145 aa10.4□□□□□ -0.74
CPSF1-201ENST00000526271 C11orf68Q9H3H3 251 aaKnown RBP10.4□□□□□ -0.74
CPSF1-201ENST00000526271 PLEKHA2Q9HB19 425 aa10.4□□□□□ -0.74
CPSF1-201ENST00000526271 COPZ2Q9P299 210 aa10.4□□□□□ -0.74
CPSF1-201ENST00000526271 FBXL17Q9UF56 701 aa10.4□□□□□ -0.74
CPSF1-201ENST00000526271 FLVCR2Q9UPI3 526 aa10.4□□□□□ -0.74
CPSF1-201ENST00000526271 IGHV7-4-1A0A0J9YVY3 117 aa10.39□□□□□ -0.75
CPSF1-201ENST00000526271 OR4C46A6NHA9 309 aa10.39□□□□□ -0.75
CPSF1-201ENST00000526271 B3GALNT1O75752 331 aa10.39□□□□□ -0.75
CPSF1-201ENST00000526271 TRAPPC2P0DI81 140 aa10.39□□□□□ -0.75
CPSF1-201ENST00000526271 TRAPPC2BP0DI82 140 aa10.39□□□□□ -0.75
CPSF1-201ENST00000526271 TFPI2P48307 235 aa10.39□□□□□ -0.75
CPSF1-201ENST00000526271 TMEM128Q5BJH2 165 aa10.39□□□□□ -0.75
CPSF1-201ENST00000526271 OR11H2Q8NH07 326 aa10.39□□□□□ -0.75
CPSF1-201ENST00000526271 OR10C1Q96KK4 312 aa10.39□□□□□ -0.75
CPSF1-201ENST00000526271 RARRES2Q99969 163 aa10.39□□□□□ -0.75
CPSF1-201ENST00000526271 RHPN1-AS1Q9BWJ2 59 aa10.39□□□□□ -0.75
CPSF1-201ENST00000526271 NAA60Q9H7X0 242 aa10.39□□□□□ -0.75
CPSF1-201ENST00000526271 HSPG2P98160 4391 aa10.39□□□□□ -0.75
CPSF1-201ENST00000526271 IGKV3-7A0A075B6H7 116 aa10.38□□□□□ -0.75
CPSF1-201ENST00000526271 TEX13DA0A0J9YY54 714 aaPredicted RBP10.38□□□□□ -0.75
CPSF1-201ENST00000526271 C3orf85A0A1B0GTC6 90 aa10.38□□□□□ -0.75
CPSF1-201ENST00000526271 C15orf62A8K5M9 175 aa10.38□□□□□ -0.75
CPSF1-201ENST00000526271 I3L2K1 104 aa10.38□□□□□ -0.75
CPSF1-201ENST00000526271 CYB5BO43169 146 aa10.38□□□□□ -0.75
CPSF1-201ENST00000526271 IGHV3-48P01763 117 aa10.38□□□□□ -0.75
CPSF1-201ENST00000526271 RBMY1A1P0DJD3 496 aaKnown RBP10.38□□□□□ -0.75
CPSF1-201ENST00000526271 RBMY1CP0DJD4 496 aa10.38□□□□□ -0.75
CPSF1-201ENST00000526271 UBE2MP61081 183 aaKnown RBP10.38□□□□□ -0.75
CPSF1-201ENST00000526271 SUPT4H1P63272 117 aaKnown RBP10.38□□□□□ -0.75
CPSF1-201ENST00000526271 RBMY1FQ15415 496 aaKnown RBP10.38□□□□□ -0.75
CPSF1-201ENST00000526271 LAMTOR1Q6IAA8 161 aa10.38□□□□□ -0.75
CPSF1-201ENST00000526271 SPSB3Q6PJ21 355 aa10.38□□□□□ -0.75
CPSF1-201ENST00000526271 CENPSQ8N2Z9 138 aa10.38□□□□□ -0.75
CPSF1-201ENST00000526271 Q8NAQ8 132 aa10.38□□□□□ -0.75
CPSF1-201ENST00000526271 ENKURQ8TC29 256 aa10.38□□□□□ -0.75
CPSF1-201ENST00000526271 C20orf85Q9H1P6 137 aa10.38□□□□□ -0.75
CPSF1-201ENST00000526271 MARCH11A6NNE9 402 aa10.37□□□□□ -0.75
CPSF1-201ENST00000526271 MPTX1A8MV57 137 aa10.37□□□□□ -0.75
CPSF1-201ENST00000526271 H2AFB2P0C5Z0 115 aa10.37□□□□□ -0.75
CPSF1-201ENST00000526271 AKR1C4P17516 323 aa10.37□□□□□ -0.75
CPSF1-201ENST00000526271 UCP1P25874 307 aa10.37□□□□□ -0.75
CPSF1-201ENST00000526271 G6PCP35575 357 aa10.37□□□□□ -0.75
CPSF1-201ENST00000526271 LPAR6P43657 344 aa10.37□□□□□ -0.75
CPSF1-201ENST00000526271 TMED4Q7Z7H5 227 aa10.37□□□□□ -0.75
CPSF1-201ENST00000526271 GBGT1Q8N5D6 347 aa10.37□□□□□ -0.75
CPSF1-201ENST00000526271 TMEM217Q8N7C4 229 aa10.37□□□□□ -0.75
CPSF1-201ENST00000526271 UBAC2Q8NBM4 344 aa10.37□□□□□ -0.75
CPSF1-201ENST00000526271 DMBX1Q8NFW5 382 aa10.37□□□□□ -0.75
CPSF1-201ENST00000526271 OR1L8Q8NGR8 309 aa10.37□□□□□ -0.75
CPSF1-201ENST00000526271 C11orf45Q8TAV5 145 aa10.37□□□□□ -0.75
CPSF1-201ENST00000526271 GLYATL2Q8WU03 294 aa10.37□□□□□ -0.75
CPSF1-201ENST00000526271 TP53RKQ96S44 253 aa10.37□□□□□ -0.75
CPSF1-201ENST00000526271 ATP6V0BQ99437 205 aa10.37□□□□□ -0.75
CPSF1-201ENST00000526271 SCRT1Q9BWW7 348 aa10.37□□□□□ -0.75
CPSF1-201ENST00000526271 COMMD9Q9P000 198 aa10.37□□□□□ -0.75
CPSF1-201ENST00000526271 THYN1Q9P016 225 aa10.37□□□□□ -0.75
CPSF1-201ENST00000526271 KCNIP3Q9Y2W7 256 aa10.37□□□□□ -0.75
CPSF1-201ENST00000526271 TRAV6A0A075B6T7 132 aa10.36□□□□□ -0.75
CPSF1-201ENST00000526271 CDS2O95674 445 aa10.36□□□□□ -0.75
CPSF1-201ENST00000526271 PTTG1O95997 202 aa10.36□□□□□ -0.75
CPSF1-201ENST00000526271 IGKV1-39P01597 117 aa10.36□□□□□ -0.75
CPSF1-201ENST00000526271 IGKV1D-39P04432 117 aa10.36□□□□□ -0.75
CPSF1-201ENST00000526271 OR5AC1P0C628 307 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms