RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 OPRK1P41145 380 aa10.01□□□□□ -0.81
USH1C-203ENST00000526181 SUB1P53999 127 aaKnown RBP eCLIP10.01□□□□□ -0.81
USH1C-203ENST00000526181 ANKRD55Q3KP44 614 aa10.01□□□□□ -0.81
USH1C-203ENST00000526181 TOMM20LQ6UXN7 152 aa10.01□□□□□ -0.81
USH1C-203ENST00000526181 CCDC190Q86UF4 302 aa10.01□□□□□ -0.81
USH1C-203ENST00000526181 TOMM5Q8N4H5 51 aa10.01□□□□□ -0.81
USH1C-203ENST00000526181 TMEM116Q8NCL8 245 aa10.01□□□□□ -0.81
USH1C-203ENST00000526181 OR52E5Q8NH55 327 aa10.01□□□□□ -0.81
USH1C-203ENST00000526181 GALNT14Q96FL9 552 aa10.01□□□□□ -0.81
USH1C-203ENST00000526181 RHPN1-AS1Q9BWJ2 59 aa10.01□□□□□ -0.81
USH1C-203ENST00000526181 A0A1B0GU03 582 aa10□□□□□ -0.81
USH1C-203ENST00000526181 CORTO00230 105 aa10□□□□□ -0.81
USH1C-203ENST00000526181 TMEM50AO95807 157 aa10□□□□□ -0.81
USH1C-203ENST00000526181 APOHP02749 345 aaPredicted RBP10□□□□□ -0.81
USH1C-203ENST00000526181 NPBWR1P48145 328 aa10□□□□□ -0.81
USH1C-203ENST00000526181 ODF3L2Q3SX64 289 aa10□□□□□ -0.81
USH1C-203ENST00000526181 ZFAND6Q6FIF0 208 aa10□□□□□ -0.81
USH1C-203ENST00000526181 LAMTOR1Q6IAA8 161 aa10□□□□□ -0.81
USH1C-203ENST00000526181 LYZL2Q7Z4W2 148 aa10□□□□□ -0.81
USH1C-203ENST00000526181 TMED4Q7Z7H5 227 aa10□□□□□ -0.81
USH1C-203ENST00000526181 TMEM170AQ8WVE7 144 aa10□□□□□ -0.81
USH1C-203ENST00000526181 IL22RA2Q969J5 263 aa10□□□□□ -0.81
USH1C-203ENST00000526181 SCGB3A2Q96PL1 93 aa10□□□□□ -0.81
USH1C-203ENST00000526181 ZFAND3Q9H8U3 227 aa10□□□□□ -0.81
USH1C-203ENST00000526181 HEYLQ9NQ87 328 aaPredicted RBP10□□□□□ -0.81
USH1C-203ENST00000526181 KCNIP3Q9Y2W7 256 aa10□□□□□ -0.81
USH1C-203ENST00000526181 PUS1Q9Y606 427 aaKnown RBP eCLIP10□□□□□ -0.81
USH1C-203ENST00000526181 TENM3Q9P273 2699 aa10□□□□□ -0.81
USH1C-203ENST00000526181 IGKV3-7A0A075B6H7 116 aa9.99□□□□□ -0.81
USH1C-203ENST00000526181 TRAV14DV4A0A0A6YYC5 116 aa9.99□□□□□ -0.81
USH1C-203ENST00000526181 IGHV3-66A0A0C4DH42 116 aa9.99□□□□□ -0.81
USH1C-203ENST00000526181 CEBPZOSA8MTT3 80 aa9.99□□□□□ -0.81
USH1C-203ENST00000526181 LYL1P12980 280 aa9.99□□□□□ -0.81
USH1C-203ENST00000526181 FAUP35544 74 aaKnown RBP9.99□□□□□ -0.81
USH1C-203ENST00000526181 TFPI2P48307 235 aa9.99□□□□□ -0.81
USH1C-203ENST00000526181 NMSQ5H8A3 153 aa9.99□□□□□ -0.81
USH1C-203ENST00000526181 SLC24A4Q8NFF2 622 aa9.99□□□□□ -0.81
USH1C-203ENST00000526181 GGTLC1Q9BX51 225 aa9.99□□□□□ -0.81
USH1C-203ENST00000526181 STAB2Q8WWQ8 2551 aa9.98□□□□□ -0.81
USH1C-203ENST00000526181 LOC102724200A0A096LPH7 203 aaPredicted RBP9.98□□□□□ -0.81
USH1C-203ENST00000526181 A0A0B4J2A0 478 aa9.98□□□□□ -0.81
USH1C-203ENST00000526181 OR4C46A6NHA9 309 aa9.98□□□□□ -0.81
USH1C-203ENST00000526181 ZNF701M0R085 212 aaPredicted RBP9.98□□□□□ -0.81
USH1C-203ENST00000526181 CLN5O75503 358 aa9.98□□□□□ -0.81
USH1C-203ENST00000526181 SULT1A3P0DMM9 295 aa9.98□□□□□ -0.81
USH1C-203ENST00000526181 SULT1A4P0DMN0 295 aa9.98□□□□□ -0.81
USH1C-203ENST00000526181 HTR2BP41595 481 aa9.98□□□□□ -0.81
USH1C-203ENST00000526181 AP3S2P59780 193 aa9.98□□□□□ -0.81
USH1C-203ENST00000526181 C2orf83Q53S99 150 aa9.98□□□□□ -0.81
USH1C-203ENST00000526181 ZNF600Q6ZNG1 722 aa9.98□□□□□ -0.81
USH1C-203ENST00000526181 LILRB2Q8N423 598 aa9.98□□□□□ -0.81
USH1C-203ENST00000526181 OR4X1Q8NH49 305 aa9.98□□□□□ -0.81
USH1C-203ENST00000526181 ST8SIA2Q92186 375 aa9.98□□□□□ -0.81
USH1C-203ENST00000526181 SRRQ9GZT4 340 aa9.98□□□□□ -0.81
USH1C-203ENST00000526181 SHPKQ9UHJ6 478 aa9.98□□□□□ -0.81
USH1C-203ENST00000526181 SMCO1Q147U7 214 aa9.97□□□□□ -0.81
USH1C-203ENST00000526181 ZNF124Q15973 351 aa9.97□□□□□ -0.81
USH1C-203ENST00000526181 TIGITQ495A1 244 aa9.97□□□□□ -0.81
USH1C-203ENST00000526181 FAM90A2PQ658T7 463 aa9.97□□□□□ -0.81
USH1C-203ENST00000526181 APRG1Q8IVJ8 170 aa9.97□□□□□ -0.81
USH1C-203ENST00000526181 LGI3Q8N145 548 aa9.97□□□□□ -0.81
USH1C-203ENST00000526181 GBGT1Q8N5D6 347 aa9.97□□□□□ -0.81
USH1C-203ENST00000526181 GINS3Q9BRX5 216 aa9.97□□□□□ -0.81
USH1C-203ENST00000526181 RBKSQ9H477 322 aa9.97□□□□□ -0.81
USH1C-203ENST00000526181 HSPB7Q9UBY9 170 aa9.97□□□□□ -0.81
USH1C-203ENST00000526181 IGKV1-17P01599 117 aa9.96□□□□□ -0.82
USH1C-203ENST00000526181 ANXA3P12429 323 aa9.96□□□□□ -0.82
USH1C-203ENST00000526181 VAMP1P23763 118 aa9.96□□□□□ -0.82
USH1C-203ENST00000526181 NPY1RP25929 384 aa9.96□□□□□ -0.82
USH1C-203ENST00000526181 CCR6P51684 374 aa9.96□□□□□ -0.82
USH1C-203ENST00000526181 RND2P52198 227 aa9.96□□□□□ -0.82
USH1C-203ENST00000526181 TNFRSF9Q07011 255 aa9.96□□□□□ -0.82
USH1C-203ENST00000526181 BAK1Q16611 211 aa9.96□□□□□ -0.82
USH1C-203ENST00000526181 PRSS54Q6PEW0 395 aa9.96□□□□□ -0.82
USH1C-203ENST00000526181 TCF24Q7RTU0 167 aa9.96□□□□□ -0.82
USH1C-203ENST00000526181 VSIRQ9H7M9 311 aa9.96□□□□□ -0.82
USH1C-203ENST00000526181 RPS10-NUDT3A0A1W2PQS6 291 aa9.95□□□□□ -0.82
USH1C-203ENST00000526181 DFFBO76075 338 aa9.95□□□□□ -0.82
USH1C-203ENST00000526181 IGLC1P0CG04 106 aa9.95□□□□□ -0.82
USH1C-203ENST00000526181 SRPXP78539 464 aa9.95□□□□□ -0.82
USH1C-203ENST00000526181 PPP1R1AQ13522 171 aa9.95□□□□□ -0.82
USH1C-203ENST00000526181 TMEM128Q5BJH2 165 aa9.95□□□□□ -0.82
USH1C-203ENST00000526181 SPANXN2Q5MJ10 180 aa9.95□□□□□ -0.82
USH1C-203ENST00000526181 RNASEH2CQ8TDP1 164 aaKnown RBP9.95□□□□□ -0.82
USH1C-203ENST00000526181 DTD1Q8TEA8 209 aa9.95□□□□□ -0.82
USH1C-203ENST00000526181 OVOL2Q9BRP0 275 aa9.95□□□□□ -0.82
USH1C-203ENST00000526181 SFT2D2O95562 160 aa9.94□□□□□ -0.82
USH1C-203ENST00000526181 IFNA10P01566 189 aa9.94□□□□□ -0.82
USH1C-203ENST00000526181 RPL35AP18077 110 aaKnown RBP9.94□□□□□ -0.82
USH1C-203ENST00000526181 WFDC3Q8IUB2 231 aa9.94□□□□□ -0.82
USH1C-203ENST00000526181 FAM24BQ8N5W8 94 aa9.94□□□□□ -0.82
USH1C-203ENST00000526181 OR1S1Q8NH92 325 aa9.94□□□□□ -0.82
USH1C-203ENST00000526181 SDHCQ99643 169 aaPredicted RBP9.94□□□□□ -0.82
USH1C-203ENST00000526181 SLC25A21Q9BQT8 299 aaPredicted RBP9.94□□□□□ -0.82
USH1C-203ENST00000526181 MAP6D1Q9H9H5 199 aa9.94□□□□□ -0.82
USH1C-203ENST00000526181 RYR2Q92736 4967 aa9.94□□□□□ -0.82
USH1C-203ENST00000526181 TRAV30A0A087WSZ9 112 aa9.93□□□□□ -0.82
USH1C-203ENST00000526181 LINC00854A0A1B0GVQ3 168 aa9.93□□□□□ -0.82
USH1C-203ENST00000526181 PITX3O75364 302 aa9.93□□□□□ -0.82
USH1C-203ENST00000526181 SLC25A4P12235 298 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms