RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 MUC7Q8TAX7 377 aa13.81□□□□□ -0.2
TSPAN4-216ENST00000526055 GPR146Q96CH1 333 aa13.81□□□□□ -0.2
TSPAN4-216ENST00000526055 CACNG5Q9UF02 275 aa13.81□□□□□ -0.2
TSPAN4-216ENST00000526055 SMPXQ9UHP9 88 aa13.81□□□□□ -0.2
TSPAN4-216ENST00000526055 A0A0B4J2A0 478 aa13.8□□□□□ -0.2
TSPAN4-216ENST00000526055 CD5P06127 495 aa13.8□□□□□ -0.2
TSPAN4-216ENST00000526055 BMI1P35226 326 aa13.8□□□□□ -0.2
TSPAN4-216ENST00000526055 TRIQKQ629K1 86 aa13.8□□□□□ -0.2
TSPAN4-216ENST00000526055 S100ZQ8WXG8 99 aa13.8□□□□□ -0.2
TSPAN4-216ENST00000526055 ZNF414Q96IQ9 312 aa13.8□□□□□ -0.2
TSPAN4-216ENST00000526055 FAM110AQ9BQ89 295 aa13.8□□□□□ -0.2
TSPAN4-216ENST00000526055 GINS3Q9BRX5 216 aa13.8□□□□□ -0.2
TSPAN4-216ENST00000526055 SHPKQ9UHJ6 478 aa13.8□□□□□ -0.2
TSPAN4-216ENST00000526055 IGHV7-4-1A0A0J9YVY3 117 aa13.79□□□□□ -0.2
TSPAN4-216ENST00000526055 RPS10-NUDT3A0A1W2PQS6 291 aa13.79□□□□□ -0.2
TSPAN4-216ENST00000526055 RBMY1BA6NDE4 496 aaKnown RBP13.79□□□□□ -0.2
TSPAN4-216ENST00000526055 RBMY1EA6NEQ0 496 aaKnown RBP13.79□□□□□ -0.2
TSPAN4-216ENST00000526055 YIF1AO95070 293 aa13.79□□□□□ -0.2
TSPAN4-216ENST00000526055 RBMY1DP0C7P1 496 aaKnown RBP13.79□□□□□ -0.2
TSPAN4-216ENST00000526055 SULT1A3P0DMM9 295 aa13.79□□□□□ -0.2
TSPAN4-216ENST00000526055 SULT1A4P0DMN0 295 aa13.79□□□□□ -0.2
TSPAN4-216ENST00000526055 NOXA1Q86UR1 476 aa13.79□□□□□ -0.2
TSPAN4-216ENST00000526055 TMEM116Q8NCL8 245 aa13.79□□□□□ -0.2
TSPAN4-216ENST00000526055 SLC25A21Q9BQT8 299 aaPredicted RBP13.79□□□□□ -0.2
TSPAN4-216ENST00000526055 WFDC10AQ9H1F0 79 aa13.79□□□□□ -0.2
TSPAN4-216ENST00000526055 DNAH7Q8WXX0 4024 aa13.78□□□□□ -0.2
TSPAN4-216ENST00000526055 TRAV14DV4A0A0A6YYC5 116 aa13.78□□□□□ -0.2
TSPAN4-216ENST00000526055 OR4C46A6NHA9 309 aa13.78□□□□□ -0.2
TSPAN4-216ENST00000526055 TMEM50AO95807 157 aa13.78□□□□□ -0.2
TSPAN4-216ENST00000526055 IGHV3-48P01763 117 aa13.78□□□□□ -0.2
TSPAN4-216ENST00000526055 AKR1C4P17516 323 aa13.78□□□□□ -0.2
TSPAN4-216ENST00000526055 OPRK1P41145 380 aa13.78□□□□□ -0.2
TSPAN4-216ENST00000526055 CCR6P51684 374 aa13.78□□□□□ -0.2
TSPAN4-216ENST00000526055 SUPT4H1P63272 117 aaKnown RBP13.78□□□□□ -0.2
TSPAN4-216ENST00000526055 C2orf83Q53S99 150 aa13.78□□□□□ -0.2
TSPAN4-216ENST00000526055 ZNF600Q6ZNG1 722 aa13.78□□□□□ -0.2
TSPAN4-216ENST00000526055 LGI3Q8N145 548 aa13.78□□□□□ -0.2
TSPAN4-216ENST00000526055 OR4X1Q8NH49 305 aa13.78□□□□□ -0.2
TSPAN4-216ENST00000526055 RNASEH2CQ8TDP1 164 aaKnown RBP13.78□□□□□ -0.2
TSPAN4-216ENST00000526055 RHPN1-AS1Q9BWJ2 59 aa13.78□□□□□ -0.2
TSPAN4-216ENST00000526055 HIPK2Q9H2X6 1198 aa13.78□□□□□ -0.2
TSPAN4-216ENST00000526055 HEYLQ9NQ87 328 aaPredicted RBP13.78□□□□□ -0.2
TSPAN4-216ENST00000526055 SELENOKQ9Y6D0 94 aa13.78□□□□□ -0.2
TSPAN4-216ENST00000526055 DUXBA0A1W2PPF3 345 aa13.77□□□□□ -0.21
TSPAN4-216ENST00000526055 CEBPZOSA8MTT3 80 aa13.77□□□□□ -0.21
TSPAN4-216ENST00000526055 CHEK1O14757 476 aa13.77□□□□□ -0.21
TSPAN4-216ENST00000526055 CLN5O75503 358 aa13.77□□□□□ -0.21
TSPAN4-216ENST00000526055 TMEM128Q5BJH2 165 aa13.77□□□□□ -0.21
TSPAN4-216ENST00000526055 NMSQ5H8A3 153 aa13.77□□□□□ -0.21
TSPAN4-216ENST00000526055 FNDC4Q9H6D8 234 aaPredicted RBP13.77□□□□□ -0.21
TSPAN4-216ENST00000526055 EDA2RQ9HAV5 297 aa13.77□□□□□ -0.21
TSPAN4-216ENST00000526055 IGHV3OR16-8A0A075B7F1 116 aa13.76□□□□□ -0.21
TSPAN4-216ENST00000526055 TRAV30A0A087WSZ9 112 aa13.76□□□□□ -0.21
TSPAN4-216ENST00000526055 LOC102724200A0A096LPH7 203 aaPredicted RBP13.76□□□□□ -0.21
TSPAN4-216ENST00000526055 ZNF207O43670 478 aaKnown RBP13.76□□□□□ -0.21
TSPAN4-216ENST00000526055 SLC25A4P12235 298 aa13.76□□□□□ -0.21
TSPAN4-216ENST00000526055 CMC4P56277 68 aaPredicted RBP13.76□□□□□ -0.21
TSPAN4-216ENST00000526055 SMCO1Q147U7 214 aa13.76□□□□□ -0.21
TSPAN4-216ENST00000526055 TOMM20LQ6UXN7 152 aa13.76□□□□□ -0.21
TSPAN4-216ENST00000526055 SLC24A4Q8NFF2 622 aa13.76□□□□□ -0.21
TSPAN4-216ENST00000526055 GGTLC1Q9BX51 225 aa13.76□□□□□ -0.21
TSPAN4-216ENST00000526055 A0A1B0GU03 582 aa13.75□□□□□ -0.21
TSPAN4-216ENST00000526055 ATP5IP56385 69 aaPredicted RBP13.75□□□□□ -0.21
TSPAN4-216ENST00000526055 ETFRF1Q6IPR1 90 aa13.75□□□□□ -0.21
TSPAN4-216ENST00000526055 RNF2Q99496 336 aa13.75□□□□□ -0.21
TSPAN4-216ENST00000526055 HSPB7Q9UBY9 170 aa13.75□□□□□ -0.21
TSPAN4-216ENST00000526055 PUS1Q9Y606 427 aaKnown RBP eCLIP13.75□□□□□ -0.21
TSPAN4-216ENST00000526055 NAP1L6A6NFF2 107 aa13.74□□□□□ -0.21
TSPAN4-216ENST00000526055 LYL1P12980 280 aa13.74□□□□□ -0.21
TSPAN4-216ENST00000526055 TNFRSF9Q07011 255 aa13.74□□□□□ -0.21
TSPAN4-216ENST00000526055 BAK1Q16611 211 aa13.74□□□□□ -0.21
TSPAN4-216ENST00000526055 LYZL2Q7Z4W2 148 aa13.74□□□□□ -0.21
TSPAN4-216ENST00000526055 LRTM2Q8N967 370 aa13.74□□□□□ -0.21
TSPAN4-216ENST00000526055 CCDC32Q9BV29 185 aa13.74□□□□□ -0.21
TSPAN4-216ENST00000526055 WDR12Q9GZL7 423 aaKnown RBP13.74□□□□□ -0.21
TSPAN4-216ENST00000526055 TMEM231Q9H6L2 316 aa13.74□□□□□ -0.21
TSPAN4-216ENST00000526055 VSIRQ9H7M9 311 aa13.74□□□□□ -0.21
TSPAN4-216ENST00000526055 ZFAND3Q9H8U3 227 aa13.74□□□□□ -0.21
TSPAN4-216ENST00000526055 U3KQ87 197 aa13.74□□□□□ -0.21
TSPAN4-216ENST00000526055 CENPXA8MT69 81 aa13.73□□□□□ -0.21
TSPAN4-216ENST00000526055 SLC25A6P12236 298 aa13.73□□□□□ -0.21
TSPAN4-216ENST00000526055 IL7P13232 177 aa13.73□□□□□ -0.21
TSPAN4-216ENST00000526055 NPY1RP25929 384 aa13.73□□□□□ -0.21
TSPAN4-216ENST00000526055 CASC10Q5T4H9 136 aa13.73□□□□□ -0.21
TSPAN4-216ENST00000526055 FAM90A2PQ658T7 463 aa13.73□□□□□ -0.21
TSPAN4-216ENST00000526055 TMED4Q7Z7H5 227 aa13.73□□□□□ -0.21
TSPAN4-216ENST00000526055 SDHCQ99643 169 aaPredicted RBP13.73□□□□□ -0.21
TSPAN4-216ENST00000526055 C7orf50Q9BRJ6 194 aaKnown RBP13.73□□□□□ -0.21
TSPAN4-216ENST00000526055 A0A1W2PS18 150 aa13.72□□□□□ -0.21
TSPAN4-216ENST00000526055 UBE2MP61081 183 aaKnown RBP13.72□□□□□ -0.21
TSPAN4-216ENST00000526055 PAFAH1B2P68402 229 aa13.72□□□□□ -0.21
TSPAN4-216ENST00000526055 RBMS2Q15434 407 aaKnown RBP13.72□□□□□ -0.21
TSPAN4-216ENST00000526055 MLANAQ16655 118 aa13.72□□□□□ -0.21
TSPAN4-216ENST00000526055 ODF3L2Q3SX64 289 aa13.72□□□□□ -0.21
TSPAN4-216ENST00000526055 OR1S2Q8NGQ3 325 aa13.72□□□□□ -0.21
TSPAN4-216ENST00000526055 PRR13Q9NZ81 148 aa13.72□□□□□ -0.21
TSPAN4-216ENST00000526055 MRPL36Q9P0J6 103 aaKnown RBP13.72□□□□□ -0.21
TSPAN4-216ENST00000526055 TRAV2A0A0B4J234 112 aa13.71□□□□□ -0.21
TSPAN4-216ENST00000526055 KIR2DL5BA0A0G2JN68 375 aa13.71□□□□□ -0.21
TSPAN4-216ENST00000526055 KIR2DL5BA0A0G2JPC4 375 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms