RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 PLXND1Q9Y4D7 1925 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 SDHAF1A6NFY7 115 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 PIRO00625 290 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 C1QBP02746 253 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 BPGMP07738 259 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 RBP1P09455 135 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 HIST1H2BOP23527 126 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 HLA-DMBP28068 263 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 HIST1H2BBP33778 126 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 EVX1P49640 407 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 HIST1H2BDP58876 126 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 HSPE1P61604 102 aaKnown RBP2.17□□□□□ -2.06
CSDE1-211ENST00000525970 HIST1H2BCP62807 126 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 RPL19P84098 196 aaKnown RBP2.17□□□□□ -2.06
CSDE1-211ENST00000525970 RPL18Q07020 188 aaKnown RBP2.17□□□□□ -2.06
CSDE1-211ENST00000525970 HIST2H2BEQ16778 126 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.17□□□□□ -2.06
CSDE1-211ENST00000525970 IBA57Q5T440 356 aaKnown RBP2.17□□□□□ -2.06
CSDE1-211ENST00000525970 AADACL3Q5VUY0 350 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 ZNF767PQ75MW2 155 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 TMED4Q7Z7H5 227 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 CROCCP2Q86T23 111 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 LHFPL1Q86WI0 220 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 MMGT1Q8N4V1 131 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 H1FXQ92522 213 aaKnown RBP2.17□□□□□ -2.06
CSDE1-211ENST00000525970 SLC7A6Q92536 515 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 HIST1H2BHQ93079 126 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 MAGOHBQ96A72 148 aaKnown RBP2.17□□□□□ -2.06
CSDE1-211ENST00000525970 IMMP2LQ96T52 175 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 HIST1H2BNQ99877 126 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 HIST1H2BMQ99879 126 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 TUBA4BQ9H853 241 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 OPTCQ9UBM4 332 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 NRXN1Q9ULB1 1477 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 UNC13BO14795 1591 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 INO80Q9ULG1 1556 aaPredicted RBP2.17□□□□□ -2.06
CSDE1-211ENST00000525970 ZC3H13Q5T200 1668 aaKnown RBP2.17□□□□□ -2.06
CSDE1-211ENST00000525970 CPAMD8Q8IZJ3 1885 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 SCN10AQ9Y5Y9 1956 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 IQGAP3Q86VI3 1631 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 LRRC7Q96NW7 1537 aa2.17□□□□□ -2.06
CSDE1-211ENST00000525970 GLI2P10070 1586 aa2.16□□□□□ -2.06
CSDE1-211ENST00000525970 A0A1B0GVG6 124 aa2.16□□□□□ -2.06
CSDE1-211ENST00000525970 C8GP07360 202 aa2.16□□□□□ -2.06
CSDE1-211ENST00000525970 LGALS1P09382 135 aaKnown RBP2.16□□□□□ -2.06
CSDE1-211ENST00000525970 CSRP1P21291 193 aaKnown RBP2.16□□□□□ -2.06
CSDE1-211ENST00000525970 RPL28P46779 137 aaKnown RBP2.16□□□□□ -2.06
CSDE1-211ENST00000525970 ARPC4P59998 168 aa2.16□□□□□ -2.06
CSDE1-211ENST00000525970 HIST1H4AP62805 103 aaKnown RBP2.16□□□□□ -2.06
CSDE1-211ENST00000525970 POU6F1Q14863 301 aa2.16□□□□□ -2.06
CSDE1-211ENST00000525970 RPL22L1Q6P5R6 122 aaKnown RBP2.16□□□□□ -2.06
CSDE1-211ENST00000525970 STX12Q86Y82 276 aa2.16□□□□□ -2.06
CSDE1-211ENST00000525970 LINC00301Q8NCQ3 95 aa2.16□□□□□ -2.06
CSDE1-211ENST00000525970 HOPXQ9BPY8 73 aaPredicted RBP2.16□□□□□ -2.06
CSDE1-211ENST00000525970 BOLA2Q9H3K6 86 aa2.16□□□□□ -2.06
CSDE1-211ENST00000525970 PRO2289Q9P1D8 64 aa2.16□□□□□ -2.06
CSDE1-211ENST00000525970 CYSLTR1Q9Y271 337 aa2.16□□□□□ -2.06
CSDE1-211ENST00000525970 UTP11Q9Y3A2 253 aaKnown RBP2.16□□□□□ -2.06
CSDE1-211ENST00000525970 TIMM22Q9Y584 194 aa2.16□□□□□ -2.06
CSDE1-211ENST00000525970 HEATR5AQ86XA9 2040 aa2.16□□□□□ -2.06
CSDE1-211ENST00000525970 KIF20BQ96Q89 1820 aa2.16□□□□□ -2.06
CSDE1-211ENST00000525970 COL4A2P08572 1712 aa2.16□□□□□ -2.06
CSDE1-211ENST00000525970 KIAA0556O60303 1618 aa2.16□□□□□ -2.06
CSDE1-211ENST00000525970 ABCA6Q8N139 1617 aa2.16□□□□□ -2.06
CSDE1-211ENST00000525970 URB2Q14146 1524 aaKnown RBP2.16□□□□□ -2.06
CSDE1-211ENST00000525970 TOPBP1Q92547 1522 aa2.16□□□□□ -2.06
CSDE1-211ENST00000525970 KDM6AO15550 1401 aaPredicted RBP2.16□□□□□ -2.06
CSDE1-211ENST00000525970 ZNF532Q9HCE3 1301 aa2.16□□□□□ -2.06
CSDE1-211ENST00000525970 SAMD9LQ8IVG5 1584 aa2.15□□□□□ -2.06
CSDE1-211ENST00000525970 VWDEQ8N2E2 1590 aa2.15□□□□□ -2.06
CSDE1-211ENST00000525970 ATP10BO94823 1461 aa2.15□□□□□ -2.06
CSDE1-211ENST00000525970 CDK12Q9NYV4 1490 aaPredicted RBP2.15□□□□□ -2.06
CSDE1-211ENST00000525970 ITSN1Q15811 1721 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 TRAV9-1A0A075B6T8 112 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 hCG_1818297A0A087WSY0 165 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 A8MT66 165 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 H3BT86 120 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 OR2J2O76002 312 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 IGHV3-7P01780 117 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 S100A1P23297 94 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 PHBP35232 272 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 CCR2P41597 374 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 EIF2B2P49770 351 aaKnown RBP2.15□□□□□ -2.07
CSDE1-211ENST00000525970 TPI1P60174 286 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 RAB14P61106 215 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 NCALDP61601 193 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 KISS1Q15726 138 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 MOGQ16653 247 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 AGTRAPQ6RW13 159 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 GOLT1AQ6ZVE7 132 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 OR51T1Q8NGJ9 327 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 GNPDA2Q8TDQ7 276 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 NAT14Q8WUY8 206 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 Q9H521 79 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 RNF122Q9H9V4 155 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 HHLA3Q9XRX5 114 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 TRPM2O94759 1503 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 ABCC6O95255 1503 aa2.15□□□□□ -2.07
CSDE1-211ENST00000525970 CPSF1Q10570 1443 aaKnown RBP2.15□□□□□ -2.07
CSDE1-211ENST00000525970 FRMPD1Q5SYB0 1578 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 353.7 ms