RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 NPBWR1P48145 328 aa9.61□□□□□ -0.87
TRAPPC4-205ENST00000525079 ANKRD55Q3KP44 614 aa9.61□□□□□ -0.87
TRAPPC4-205ENST00000525079 AARDQ4LEZ3 155 aa9.61□□□□□ -0.87
TRAPPC4-205ENST00000525079 LINC00322Q6ZN03 302 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC4-205ENST00000525079 LGI3Q8N145 548 aa9.61□□□□□ -0.87
TRAPPC4-205ENST00000525079 IL22RA2Q969J5 263 aa9.61□□□□□ -0.87
TRAPPC4-205ENST00000525079 UBQLN2Q9UHD9 624 aa9.61□□□□□ -0.87
TRAPPC4-205ENST00000525079 HUWE1Q7Z6Z7 4374 aaKnown RBP9.61□□□□□ -0.87
TRAPPC4-205ENST00000525079 IGHV7-4-1A0A0J9YVY3 117 aa9.6□□□□□ -0.87
TRAPPC4-205ENST00000525079 LINC00854A0A1B0GVQ3 168 aa9.6□□□□□ -0.87
TRAPPC4-205ENST00000525079 CORTO00230 105 aa9.6□□□□□ -0.87
TRAPPC4-205ENST00000525079 ANXA3P12429 323 aa9.6□□□□□ -0.87
TRAPPC4-205ENST00000525079 VAMP1P23763 118 aa9.6□□□□□ -0.87
TRAPPC4-205ENST00000525079 HTR2BP41595 481 aa9.6□□□□□ -0.87
TRAPPC4-205ENST00000525079 BAK1Q16611 211 aa9.6□□□□□ -0.87
TRAPPC4-205ENST00000525079 BSXQ3C1V8 233 aa9.6□□□□□ -0.87
TRAPPC4-205ENST00000525079 LAMTOR1Q6IAA8 161 aa9.6□□□□□ -0.87
TRAPPC4-205ENST00000525079 TOMM20LQ6UXN7 152 aa9.6□□□□□ -0.87
TRAPPC4-205ENST00000525079 TMEM116Q8NCL8 245 aa9.6□□□□□ -0.87
TRAPPC4-205ENST00000525079 RNF2Q99496 336 aa9.6□□□□□ -0.87
TRAPPC4-205ENST00000525079 SPATA25Q9BR10 227 aa9.6□□□□□ -0.87
TRAPPC4-205ENST00000525079 RHPN1-AS1Q9BWJ2 59 aa9.6□□□□□ -0.87
TRAPPC4-205ENST00000525079 IGKV3-7A0A075B6H7 116 aa9.59□□□□□ -0.87
TRAPPC4-205ENST00000525079 TRAV14DV4A0A0A6YYC5 116 aa9.59□□□□□ -0.87
TRAPPC4-205ENST00000525079 A0A0B4J2A0 478 aa9.59□□□□□ -0.87
TRAPPC4-205ENST00000525079 IGHV3-66A0A0C4DH42 116 aa9.59□□□□□ -0.87
TRAPPC4-205ENST00000525079 A0A1B0GU03 582 aa9.59□□□□□ -0.87
TRAPPC4-205ENST00000525079 CHEK1O14757 476 aa9.59□□□□□ -0.87
TRAPPC4-205ENST00000525079 TSPAN4O14817 238 aa9.59□□□□□ -0.87
TRAPPC4-205ENST00000525079 INPP1P49441 399 aa9.59□□□□□ -0.87
TRAPPC4-205ENST00000525079 CCR6P51684 374 aa9.59□□□□□ -0.87
TRAPPC4-205ENST00000525079 SMCO1Q147U7 214 aa9.59□□□□□ -0.87
TRAPPC4-205ENST00000525079 NMSQ5H8A3 153 aa9.59□□□□□ -0.87
TRAPPC4-205ENST00000525079 ZNF600Q6ZNG1 722 aa9.59□□□□□ -0.87
TRAPPC4-205ENST00000525079 SLC24A4Q8NFF2 622 aa9.59□□□□□ -0.87
TRAPPC4-205ENST00000525079 TMEM170AQ8WVE7 144 aa9.59□□□□□ -0.87
TRAPPC4-205ENST00000525079 OR10C1Q96KK4 312 aa9.59□□□□□ -0.87
TRAPPC4-205ENST00000525079 CITED4Q96RK1 184 aa9.59□□□□□ -0.87
TRAPPC4-205ENST00000525079 SPAG8Q99932 426 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC4-205ENST00000525079 FAM110AQ9BQ89 295 aa9.59□□□□□ -0.87
TRAPPC4-205ENST00000525079 RBKSQ9H477 322 aa9.59□□□□□ -0.87
TRAPPC4-205ENST00000525079 SHPKQ9UHJ6 478 aa9.59□□□□□ -0.87
TRAPPC4-205ENST00000525079 PUS1Q9Y606 427 aaKnown RBP eCLIP9.59□□□□□ -0.87
TRAPPC4-205ENST00000525079 TENM3Q9P273 2699 aa9.59□□□□□ -0.88
TRAPPC4-205ENST00000525079 CLN5O75503 358 aa9.58□□□□□ -0.88
TRAPPC4-205ENST00000525079 APOHP02749 345 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC4-205ENST00000525079 TFPI2P48307 235 aa9.58□□□□□ -0.88
TRAPPC4-205ENST00000525079 SRPXP78539 464 aa9.58□□□□□ -0.88
TRAPPC4-205ENST00000525079 TNFRSF9Q07011 255 aa9.58□□□□□ -0.88
TRAPPC4-205ENST00000525079 PPP1R1AQ13522 171 aa9.58□□□□□ -0.88
TRAPPC4-205ENST00000525079 TIGITQ495A1 244 aa9.58□□□□□ -0.88
TRAPPC4-205ENST00000525079 C2orf83Q53S99 150 aa9.58□□□□□ -0.88
TRAPPC4-205ENST00000525079 TMEM128Q5BJH2 165 aa9.58□□□□□ -0.88
TRAPPC4-205ENST00000525079 TRIQKQ629K1 86 aa9.58□□□□□ -0.88
TRAPPC4-205ENST00000525079 OR4X1Q8NH49 305 aa9.58□□□□□ -0.88
TRAPPC4-205ENST00000525079 OR1S1Q8NH92 325 aa9.58□□□□□ -0.88
TRAPPC4-205ENST00000525079 SDHCQ99643 169 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC4-205ENST00000525079 SLC25A21Q9BQT8 299 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC4-205ENST00000525079 HIPK2Q9H2X6 1198 aa9.58□□□□□ -0.88
TRAPPC4-205ENST00000525079 ZFAND3Q9H8U3 227 aa9.58□□□□□ -0.88
TRAPPC4-205ENST00000525079 RPS10-NUDT3A0A1W2PQS6 291 aa9.57□□□□□ -0.88
TRAPPC4-205ENST00000525079 IFNA10P01566 189 aa9.57□□□□□ -0.88
TRAPPC4-205ENST00000525079 NPY1RP25929 384 aa9.57□□□□□ -0.88
TRAPPC4-205ENST00000525079 CENPSQ8N2Z9 138 aa9.57□□□□□ -0.88
TRAPPC4-205ENST00000525079 LILRB2Q8N423 598 aa9.57□□□□□ -0.88
TRAPPC4-205ENST00000525079 GBGT1Q8N5D6 347 aa9.57□□□□□ -0.88
TRAPPC4-205ENST00000525079 MUC7Q8TAX7 377 aa9.57□□□□□ -0.88
TRAPPC4-205ENST00000525079 ST8SIA2Q92186 375 aa9.57□□□□□ -0.88
TRAPPC4-205ENST00000525079 GINS3Q9BRX5 216 aa9.57□□□□□ -0.88
TRAPPC4-205ENST00000525079 HSPB7Q9UBY9 170 aa9.57□□□□□ -0.88
TRAPPC4-205ENST00000525079 FLVCR2Q9UPI3 526 aa9.57□□□□□ -0.88
TRAPPC4-205ENST00000525079 LOC102724200A0A096LPH7 203 aaPredicted RBP9.56□□□□□ -0.88
TRAPPC4-205ENST00000525079 OR4C46A6NHA9 309 aa9.56□□□□□ -0.88
TRAPPC4-205ENST00000525079 SFT2D2O95562 160 aa9.56□□□□□ -0.88
TRAPPC4-205ENST00000525079 RND2P52198 227 aa9.56□□□□□ -0.88
TRAPPC4-205ENST00000525079 ODF3L2Q3SX64 289 aa9.56□□□□□ -0.88
TRAPPC4-205ENST00000525079 PRSS54Q6PEW0 395 aa9.56□□□□□ -0.88
TRAPPC4-205ENST00000525079 TCF24Q7RTU0 167 aa9.56□□□□□ -0.88
TRAPPC4-205ENST00000525079 WFDC3Q8IUB2 231 aa9.56□□□□□ -0.88
TRAPPC4-205ENST00000525079 RNASEH2CQ8TDP1 164 aaKnown RBP9.56□□□□□ -0.88
TRAPPC4-205ENST00000525079 DTD1Q8TEA8 209 aa9.56□□□□□ -0.88
TRAPPC4-205ENST00000525079 DEDD2Q8WXF8 326 aa9.56□□□□□ -0.88
TRAPPC4-205ENST00000525079 GGTLC1Q9BX51 225 aa9.56□□□□□ -0.88
TRAPPC4-205ENST00000525079 EDA2RQ9HAV5 297 aa9.56□□□□□ -0.88
TRAPPC4-205ENST00000525079 NDUFA13Q9P0J0 144 aa9.56□□□□□ -0.88
TRAPPC4-205ENST00000525079 STAB2Q8WWQ8 2551 aa9.55□□□□□ -0.88
TRAPPC4-205ENST00000525079 C3orf84H3BNL1 204 aa9.55□□□□□ -0.88
TRAPPC4-205ENST00000525079 IGKV1-17P01599 117 aa9.55□□□□□ -0.88
TRAPPC4-205ENST00000525079 HOXB5P09067 269 aa9.55□□□□□ -0.88
TRAPPC4-205ENST00000525079 NPPCP23582 126 aa9.55□□□□□ -0.88
TRAPPC4-205ENST00000525079 RBMS2Q15434 407 aaKnown RBP9.55□□□□□ -0.88
TRAPPC4-205ENST00000525079 ZNF124Q15973 351 aa9.55□□□□□ -0.88
TRAPPC4-205ENST00000525079 FAM90A2PQ658T7 463 aa9.55□□□□□ -0.88
TRAPPC4-205ENST00000525079 APRG1Q8IVJ8 170 aa9.55□□□□□ -0.88
TRAPPC4-205ENST00000525079 NPIPB3Q92617 1050 aa9.55□□□□□ -0.88
TRAPPC4-205ENST00000525079 ACY3Q96HD9 319 aa9.55□□□□□ -0.88
TRAPPC4-205ENST00000525079 CACFD1Q9UGQ2 172 aa9.55□□□□□ -0.88
TRAPPC4-205ENST00000525079 TRAV30A0A087WSZ9 112 aa9.54□□□□□ -0.88
TRAPPC4-205ENST00000525079 DUXBA0A1W2PPF3 345 aa9.54□□□□□ -0.88
TRAPPC4-205ENST00000525079 NAP1L6A6NFF2 107 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms