RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 IGKV3-7A0A075B6H7 116 aa13.81□□□□□ -0.2
CAPN1-203ENST00000525013 OPRK1P41145 380 aa13.81□□□□□ -0.2
CAPN1-203ENST00000525013 GPR146Q96CH1 333 aa13.81□□□□□ -0.2
CAPN1-203ENST00000525013 SOSTQ9BQB4 213 aa13.81□□□□□ -0.2
CAPN1-203ENST00000525013 HEYLQ9NQ87 328 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-203ENST00000525013 TMEM50AO95807 157 aa13.8□□□□□ -0.2
CAPN1-203ENST00000525013 TFPI2P48307 235 aa13.8□□□□□ -0.2
CAPN1-203ENST00000525013 ODF3L2Q3SX64 289 aa13.8□□□□□ -0.2
CAPN1-203ENST00000525013 PVRIGQ6DKI7 326 aa13.8□□□□□ -0.2
CAPN1-203ENST00000525013 ZNF600Q6ZNG1 722 aa13.8□□□□□ -0.2
CAPN1-203ENST00000525013 OR52E5Q8NH55 327 aa13.8□□□□□ -0.2
CAPN1-203ENST00000525013 PUS1Q9Y606 427 aaKnown RBP eCLIP13.8□□□□□ -0.2
CAPN1-203ENST00000525013 CEBPZOSA8MTT3 80 aa13.79□□□□□ -0.2
CAPN1-203ENST00000525013 AKR1C4P17516 323 aa13.79□□□□□ -0.2
CAPN1-203ENST00000525013 BMI1P35226 326 aa13.79□□□□□ -0.2
CAPN1-203ENST00000525013 HTR2BP41595 481 aa13.79□□□□□ -0.2
CAPN1-203ENST00000525013 APOC4P55056 127 aa13.79□□□□□ -0.2
CAPN1-203ENST00000525013 MLANAQ16655 118 aa13.79□□□□□ -0.2
CAPN1-203ENST00000525013 PYDC2Q56P42 97 aa13.79□□□□□ -0.2
CAPN1-203ENST00000525013 GBGT1Q8N5D6 347 aa13.79□□□□□ -0.2
CAPN1-203ENST00000525013 FNDC4Q9H6D8 234 aaPredicted RBP13.79□□□□□ -0.2
CAPN1-203ENST00000525013 PRR13Q9NZ81 148 aa13.79□□□□□ -0.2
CAPN1-203ENST00000525013 TMEM56-RWDD3S4R434 201 aa13.79□□□□□ -0.2
CAPN1-203ENST00000525013 CSMD3Q7Z407 3707 aa13.78□□□□□ -0.2
CAPN1-203ENST00000525013 NXPH3O95157 252 aa13.78□□□□□ -0.2
CAPN1-203ENST00000525013 RPL35AP18077 110 aaKnown RBP13.78□□□□□ -0.2
CAPN1-203ENST00000525013 AARDQ4LEZ3 155 aa13.78□□□□□ -0.2
CAPN1-203ENST00000525013 TCF24Q7RTU0 167 aa13.78□□□□□ -0.2
CAPN1-203ENST00000525013 IL17DQ8TAD2 202 aa13.78□□□□□ -0.2
CAPN1-203ENST00000525013 TMEM230Q96A57 120 aa13.78□□□□□ -0.2
CAPN1-203ENST00000525013 OVOL2Q9BRP0 275 aa13.78□□□□□ -0.2
CAPN1-203ENST00000525013 MRPL36Q9P0J6 103 aaKnown RBP13.78□□□□□ -0.2
CAPN1-203ENST00000525013 IGHV3-66A0A0C4DH42 116 aa13.77□□□□□ -0.21
CAPN1-203ENST00000525013 A0A1B0GU03 582 aa13.77□□□□□ -0.21
CAPN1-203ENST00000525013 CLN5O75503 358 aa13.77□□□□□ -0.21
CAPN1-203ENST00000525013 SCGB2A1O75556 95 aa13.77□□□□□ -0.21
CAPN1-203ENST00000525013 SULT1A3P0DMM9 295 aa13.77□□□□□ -0.21
CAPN1-203ENST00000525013 SULT1A4P0DMN0 295 aa13.77□□□□□ -0.21
CAPN1-203ENST00000525013 FAUP35544 74 aaKnown RBP13.77□□□□□ -0.21
CAPN1-203ENST00000525013 TMEM187Q14656 261 aa13.77□□□□□ -0.21
CAPN1-203ENST00000525013 BSXQ3C1V8 233 aa13.77□□□□□ -0.21
CAPN1-203ENST00000525013 APRG1Q8IVJ8 170 aa13.77□□□□□ -0.21
CAPN1-203ENST00000525013 DYNC2H1Q8NCM8 4307 aaKnown RBP13.77□□□□□ -0.21
CAPN1-203ENST00000525013 OR4X1Q8NH49 305 aa13.77□□□□□ -0.21
CAPN1-203ENST00000525013 ST8SIA2Q92186 375 aa13.77□□□□□ -0.21
CAPN1-203ENST00000525013 GALNT14Q96FL9 552 aa13.77□□□□□ -0.21
CAPN1-203ENST00000525013 ZFAND3Q9H8U3 227 aa13.77□□□□□ -0.21
CAPN1-203ENST00000525013 RPS10-NUDT3A0A1W2PQS6 291 aa13.76□□□□□ -0.21
CAPN1-203ENST00000525013 APOHP02749 345 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-203ENST00000525013 S100A5P33763 92 aa13.76□□□□□ -0.21
CAPN1-203ENST00000525013 AP3S2P59780 193 aa13.76□□□□□ -0.21
CAPN1-203ENST00000525013 RPL11P62913 178 aaKnown RBP13.76□□□□□ -0.21
CAPN1-203ENST00000525013 PAFAH1B2P68402 229 aa13.76□□□□□ -0.21
CAPN1-203ENST00000525013 WFDC3Q8IUB2 231 aa13.76□□□□□ -0.21
CAPN1-203ENST00000525013 STPG3Q8N7X2 389 aa13.76□□□□□ -0.21
CAPN1-203ENST00000525013 IL22RA2Q969J5 263 aa13.76□□□□□ -0.21
CAPN1-203ENST00000525013 CD5P06127 495 aa13.75□□□□□ -0.21
CAPN1-203ENST00000525013 ANXA3P12429 323 aa13.75□□□□□ -0.21
CAPN1-203ENST00000525013 NPPCP23582 126 aa13.75□□□□□ -0.21
CAPN1-203ENST00000525013 CMC4P56277 68 aaPredicted RBP13.75□□□□□ -0.21
CAPN1-203ENST00000525013 KLF9Q13886 244 aaPredicted RBP13.75□□□□□ -0.21
CAPN1-203ENST00000525013 DEFB135Q30KP9 77 aa13.75□□□□□ -0.21
CAPN1-203ENST00000525013 TIGITQ495A1 244 aa13.75□□□□□ -0.21
CAPN1-203ENST00000525013 FAM90A2PQ658T7 463 aa13.75□□□□□ -0.21
CAPN1-203ENST00000525013 LILRB2Q8N423 598 aa13.75□□□□□ -0.21
CAPN1-203ENST00000525013 TOMM5Q8N4H5 51 aa13.75□□□□□ -0.21
CAPN1-203ENST00000525013 SLC24A4Q8NFF2 622 aa13.75□□□□□ -0.21
CAPN1-203ENST00000525013 VSIRQ9H7M9 311 aa13.75□□□□□ -0.21
CAPN1-203ENST00000525013 CACFD1Q9UGQ2 172 aa13.75□□□□□ -0.21
CAPN1-203ENST00000525013 DNASE2O00115 360 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-203ENST00000525013 UBE2CO00762 179 aa13.74□□□□□ -0.21
CAPN1-203ENST00000525013 SPRY2O43597 315 aa13.74□□□□□ -0.21
CAPN1-203ENST00000525013 DFFBO76075 338 aa13.74□□□□□ -0.21
CAPN1-203ENST00000525013 SUPT4H1P63272 117 aaKnown RBP13.74□□□□□ -0.21
CAPN1-203ENST00000525013 ZNF124Q15973 351 aa13.74□□□□□ -0.21
CAPN1-203ENST00000525013 C2orf83Q53S99 150 aa13.74□□□□□ -0.21
CAPN1-203ENST00000525013 Q6ZWC4 215 aa13.74□□□□□ -0.21
CAPN1-203ENST00000525013 LYZL2Q7Z4W2 148 aa13.74□□□□□ -0.21
CAPN1-203ENST00000525013 TMED4Q7Z7H5 227 aa13.74□□□□□ -0.21
CAPN1-203ENST00000525013 LGI3Q8N145 548 aa13.74□□□□□ -0.21
CAPN1-203ENST00000525013 RNASEH2CQ8TDP1 164 aaKnown RBP13.74□□□□□ -0.21
CAPN1-203ENST00000525013 TRIM63Q969Q1 353 aa13.74□□□□□ -0.21
CAPN1-203ENST00000525013 METTL26Q96S19 204 aa13.74□□□□□ -0.21
CAPN1-203ENST00000525013 TMEM231Q9H6L2 316 aa13.74□□□□□ -0.21
CAPN1-203ENST00000525013 TRAV30A0A087WSZ9 112 aa13.73□□□□□ -0.21
CAPN1-203ENST00000525013 A0A0B4J2A0 478 aa13.73□□□□□ -0.21
CAPN1-203ENST00000525013 KIR2DL5BA0A0G2JN68 375 aa13.73□□□□□ -0.21
CAPN1-203ENST00000525013 KIR2DL5BA0A0G2JPC4 375 aa13.73□□□□□ -0.21
CAPN1-203ENST00000525013 LCE6AA0A183 80 aa13.73□□□□□ -0.21
CAPN1-203ENST00000525013 IGKV1-17P01599 117 aa13.73□□□□□ -0.21
CAPN1-203ENST00000525013 CCR6P51684 374 aa13.73□□□□□ -0.21
CAPN1-203ENST00000525013 RND2P52198 227 aa13.73□□□□□ -0.21
CAPN1-203ENST00000525013 SRPXP78539 464 aa13.73□□□□□ -0.21
CAPN1-203ENST00000525013 SMCO1Q147U7 214 aa13.73□□□□□ -0.21
CAPN1-203ENST00000525013 KIR2DL5AQ8N109 375 aa13.73□□□□□ -0.21
CAPN1-203ENST00000525013 KIR2DL5BQ8NHK3 375 aa13.73□□□□□ -0.21
CAPN1-203ENST00000525013 MS4A6AQ9H2W1 248 aa13.73□□□□□ -0.21
CAPN1-203ENST00000525013 SHPKQ9UHJ6 478 aa13.73□□□□□ -0.21
CAPN1-203ENST00000525013 V9GYH0 126 aa13.73□□□□□ -0.21
CAPN1-203ENST00000525013 STARD9Q9P2P6 4700 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 219.6 ms