RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 METTL15P1P0C7V9 234 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 SLC25A6P12236 298 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 CXCL3P19876 107 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 HTR2BP41595 481 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 SUB1P53999 127 aaKnown RBP eCLIP3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 MFAP4P55083 255 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 KRTAP10-11P60412 298 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 DEFA6Q01524 100 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 ID3Q02535 119 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 ARL16Q0P5N6 197 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 OR2F1Q13607 317 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 KLF5Q13887 457 aaPredicted RBP3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 FCN2Q15485 313 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 BSXQ3C1V8 233 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 TIGITQ495A1 244 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 PDLIM3Q53GG5 364 aaPredicted RBP3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 C2orf83Q53S99 150 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 IL34Q6ZMJ4 242 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 ADAMTSL5Q6ZMM2 481 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 SLC16A13Q7RTY0 426 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 ZNF114Q8NC26 417 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 WFDC9Q8NEX5 89 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 OR11H7Q8NGC8 314 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 VN1R17PQ8TDU5 208 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 BSCL2Q96G97 398 aaPredicted RBP3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 CXorf58Q96LI9 332 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 C2orf50Q96LR7 162 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 PRR25Q96S07 402 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 OR5AC2Q9NZP5 309 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 STAB1Q9NY15 2570 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 PLXNB1O43157 2135 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 hCG_2014768A0A024R1R8 64 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 IGKV3-7A0A075B6H7 116 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 IGSF23A1L1A6 192 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 IZUMO1RA6ND01 250 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 SNRPGP15A8MWD9 76 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 INS-IGF2F8WCM5 200 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 H0YIZ8 118 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 SMLR1H3BR10 107 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 L7N2F9 121 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 NUPL2O15504 423 aaKnown RBP3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 CYB5BO43169 146 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 PRAF2O60831 178 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 MED6O75586 246 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 CST7O76096 145 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 BRI3O95415 125 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 APOHP02749 345 aaPredicted RBP3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 CSN3P07498 182 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 FOLR2P14207 255 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 ZP3P21754 424 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 GATA2P23769 480 aaPredicted RBP3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 CAV2P51636 162 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 VAMP2P63027 116 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 ZNF90Q03938 601 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 CD69Q07108 199 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 IL15RAQ13261 267 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 GAMTQ14353 236 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 OXA1LQ15070 435 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 KLK9Q2XQG4 91 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 BEAN1Q3B7T3 259 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 Q5BKY6 102 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 SAMD5Q5TGI4 173 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 PVRIGQ6DKI7 326 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 PRSS54Q6PEW0 395 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 BTNL8Q6UX41 500 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 ACOT7LQ6ZUV0 252 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 TMEM217Q8N7C4 229 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 OR9G4Q8NGQ1 327 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 MED28Q9H204 178 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 PALMDQ9NP74 551 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 KLK9Q9UKQ9 250 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 STRAPQ9Y3F4 350 aaKnown RBP3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 PUS1Q9Y606 427 aaKnown RBP eCLIP3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 U3KQ87 197 aa3.5□□□□□ -1.85
CHMP4A-202ENST00000524955 IGKV1OR2-108A0A075B7D4 117 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 RPS10-NUDT3A0A1W2PQS6 291 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 WI2-2373I1.2A0A1W2PRP0 233 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 TMEM213A2RRL7 107 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 C2orf70A6NJV1 201 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 ZFP92A6NM28 416 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 PMS2P5A8MQ11 134 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 FAM90A26D6RGX4 464 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 PRSS46E5RG02 174 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 CORTO00230 105 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 CLN5O75503 358 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 SCAF4O95104 1147 aaKnown RBP3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 IGKV1-17P01599 117 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 IGLC1P0CG04 106 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 PRB4P10163 310 aaPredicted RBP3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 CBLN1P23435 193 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 OR10J1P30954 320 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 NPBWR1P48145 328 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 TFPI2P48307 235 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 RAB11AP62491 216 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 NHLH2Q02577 135 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 AKR1C1Q04828 323 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 FAM106AQ4KMX7 169 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 FAM209BQ5JX69 171 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 C9orf66Q5T8R8 295 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 TOMM20LQ6UXN7 152 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms