RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 CLUHP3Q96NS8 147 aa9.53□□□□□ -0.88
NKX3-1-202ENST00000523261 C7orf50Q9BRJ6 194 aaKnown RBP9.53□□□□□ -0.88
NKX3-1-202ENST00000523261 TMEM70Q9BUB7 260 aa9.53□□□□□ -0.88
NKX3-1-202ENST00000523261 SLC35B3Q9H1N7 401 aa9.53□□□□□ -0.88
NKX3-1-202ENST00000523261 A0A087WTM6 91 aa9.52□□□□□ -0.89
NKX3-1-202ENST00000523261 SNAPC5O75971 98 aa9.52□□□□□ -0.89
NKX3-1-202ENST00000523261 PLA2G1BP04054 148 aaKnown RBP9.52□□□□□ -0.89
NKX3-1-202ENST00000523261 ATP5G1P05496 136 aa9.52□□□□□ -0.89
NKX3-1-202ENST00000523261 NKX2-1P43699 371 aaPredicted RBP9.52□□□□□ -0.89
NKX3-1-202ENST00000523261 ATP5G3P48201 142 aa9.52□□□□□ -0.89
NKX3-1-202ENST00000523261 ESRGQ1W209 222 aa9.52□□□□□ -0.89
NKX3-1-202ENST00000523261 CADM3Q8N126 398 aa9.52□□□□□ -0.89
NKX3-1-202ENST00000523261 NANOGP1Q8N7R0 232 aa9.52□□□□□ -0.89
NKX3-1-202ENST00000523261 FNDC4Q9H6D8 234 aaPredicted RBP9.52□□□□□ -0.89
NKX3-1-202ENST00000523261 NRN1Q9NPD7 142 aa9.52□□□□□ -0.89
NKX3-1-202ENST00000523261 ANXA10Q9UJ72 324 aa9.52□□□□□ -0.89
NKX3-1-202ENST00000523261 PRNDQ9UKY0 176 aa9.52□□□□□ -0.89
NKX3-1-202ENST00000523261 MRPS16Q9Y3D3 137 aaKnown RBP9.52□□□□□ -0.89
NKX3-1-202ENST00000523261 HES5Q5TA89 166 aa9.51□□□□□ -0.89
NKX3-1-202ENST00000523261 TPRA1Q86W33 373 aa9.51□□□□□ -0.89
NKX3-1-202ENST00000523261 OR13F1Q8NGS4 319 aa9.51□□□□□ -0.89
NKX3-1-202ENST00000523261 SAV1Q9H4B6 383 aaPredicted RBP9.51□□□□□ -0.89
NKX3-1-202ENST00000523261 CBY3A6NI87 242 aa9.5□□□□□ -0.89
NKX3-1-202ENST00000523261 KRASP01116 189 aa9.5□□□□□ -0.89
NKX3-1-202ENST00000523261 OXTP01178 125 aa9.5□□□□□ -0.89
NKX3-1-202ENST00000523261 PRM2P04554 102 aa9.5□□□□□ -0.89
NKX3-1-202ENST00000523261 RANBP1P43487 201 aa9.5□□□□□ -0.89
NKX3-1-202ENST00000523261 AADACL3Q5VUY0 350 aa9.5□□□□□ -0.89
NKX3-1-202ENST00000523261 TMEM91Q6ZNR0 172 aa9.5□□□□□ -0.89
NKX3-1-202ENST00000523261 OR4B1Q8NGF8 309 aa9.5□□□□□ -0.89
NKX3-1-202ENST00000523261 SLC5A7Q9GZV3 580 aa9.5□□□□□ -0.89
NKX3-1-202ENST00000523261 MAGT1Q9H0U3 335 aa9.5□□□□□ -0.89
NKX3-1-202ENST00000523261 FKBP11Q9NYL4 201 aa9.5□□□□□ -0.89
NKX3-1-202ENST00000523261 V9GY05 133 aa9.5□□□□□ -0.89
NKX3-1-202ENST00000523261 FAT3Q8TDW7 4589 aa9.5□□□□□ -0.89
NKX3-1-202ENST00000523261 PPYP01298 95 aa9.49□□□□□ -0.89
NKX3-1-202ENST00000523261 RAB6AP20340 208 aa9.49□□□□□ -0.89
NKX3-1-202ENST00000523261 FCGR2CP31995 323 aa9.49□□□□□ -0.89
NKX3-1-202ENST00000523261 G6PCP35575 357 aa9.49□□□□□ -0.89
NKX3-1-202ENST00000523261 PSG9Q00887 426 aa9.49□□□□□ -0.89
NKX3-1-202ENST00000523261 FCN2Q15485 313 aa9.49□□□□□ -0.89
NKX3-1-202ENST00000523261 ZNF79Q15937 498 aa9.49□□□□□ -0.89
NKX3-1-202ENST00000523261 CDNFQ49AH0 187 aa9.49□□□□□ -0.89
NKX3-1-202ENST00000523261 HACD4Q5VWC8 232 aa9.49□□□□□ -0.89
NKX3-1-202ENST00000523261 FOXI2Q6ZQN5 318 aa9.49□□□□□ -0.89
NKX3-1-202ENST00000523261 ZNF818PQ6ZRF7 136 aa9.49□□□□□ -0.89
NKX3-1-202ENST00000523261 NUDCD2Q8WVJ2 157 aa9.49□□□□□ -0.89
NKX3-1-202ENST00000523261 TMEM230Q96A57 120 aa9.49□□□□□ -0.89
NKX3-1-202ENST00000523261 C9orf16Q9BUW7 83 aa9.49□□□□□ -0.89
NKX3-1-202ENST00000523261 MRPL36Q9P0J6 103 aaKnown RBP9.49□□□□□ -0.89
NKX3-1-202ENST00000523261 PLAC8L1A1L4L8 177 aa9.48□□□□□ -0.89
NKX3-1-202ENST00000523261 METTL21EPA6NDL7 271 aa9.48□□□□□ -0.89
NKX3-1-202ENST00000523261 ZNF705GA8MUZ8 300 aaPredicted RBP9.48□□□□□ -0.89
NKX3-1-202ENST00000523261 P0C879 139 aa9.48□□□□□ -0.89
NKX3-1-202ENST00000523261 PTHLHP12272 177 aa9.48□□□□□ -0.89
NKX3-1-202ENST00000523261 F2RP25116 425 aa9.48□□□□□ -0.89
NKX3-1-202ENST00000523261 ARL6IP1Q15041 203 aa9.48□□□□□ -0.89
NKX3-1-202ENST00000523261 ZNF555Q8NEP9 628 aa9.48□□□□□ -0.89
NKX3-1-202ENST00000523261 OR4C16Q8NGL9 310 aa9.48□□□□□ -0.89
NKX3-1-202ENST00000523261 FCAMRQ8WWV6 532 aa9.48□□□□□ -0.89
NKX3-1-202ENST00000523261 TMEM203Q969S6 136 aa9.48□□□□□ -0.89
NKX3-1-202ENST00000523261 TNFRSF18Q9Y5U5 241 aa9.48□□□□□ -0.89
NKX3-1-202ENST00000523261 M0QYG6 137 aa9.47□□□□□ -0.89
NKX3-1-202ENST00000523261 ATP8B1O43520 1251 aa9.47□□□□□ -0.89
NKX3-1-202ENST00000523261 SSX5O60225 188 aa9.47□□□□□ -0.89
NKX3-1-202ENST00000523261 CLN5O75503 358 aa9.47□□□□□ -0.89
NKX3-1-202ENST00000523261 IGKV1-17P01599 117 aa9.47□□□□□ -0.89
NKX3-1-202ENST00000523261 HNRNPCP07910 306 aaKnown RBP eCLIP9.47□□□□□ -0.89
NKX3-1-202ENST00000523261 LPAR6P43657 344 aa9.47□□□□□ -0.89
NKX3-1-202ENST00000523261 PRCDQ00LT1 54 aa9.47□□□□□ -0.89
NKX3-1-202ENST00000523261 AHSA2Q719I0 299 aa9.47□□□□□ -0.89
NKX3-1-202ENST00000523261 LGALS14Q8TCE9 139 aa9.47□□□□□ -0.89
NKX3-1-202ENST00000523261 RXFP4Q8TDU9 374 aa9.47□□□□□ -0.89
NKX3-1-202ENST00000523261 GNPNAT1Q96EK6 184 aaPredicted RBP9.47□□□□□ -0.89
NKX3-1-202ENST00000523261 TMEM208Q9BTX3 173 aa9.47□□□□□ -0.89
NKX3-1-202ENST00000523261 SCPEP1Q9HB40 452 aa9.47□□□□□ -0.89
NKX3-1-202ENST00000523261 PSORS1C1Q9UIG5 152 aa9.47□□□□□ -0.89
NKX3-1-202ENST00000523261 TRAV26-1A0A087WT03 109 aa9.46□□□□□ -0.9
NKX3-1-202ENST00000523261 TMEM235A6NFC5 223 aa9.46□□□□□ -0.9
NKX3-1-202ENST00000523261 ARL6IP5O75915 188 aa9.46□□□□□ -0.9
NKX3-1-202ENST00000523261 TSPOP30536 169 aa9.46□□□□□ -0.9
NKX3-1-202ENST00000523261 RORCP51449 518 aa9.46□□□□□ -0.9
NKX3-1-202ENST00000523261 FXYD4P59646 89 aa9.46□□□□□ -0.9
NKX3-1-202ENST00000523261 ARPC4P59998 168 aa9.46□□□□□ -0.9
NKX3-1-202ENST00000523261 TIGITQ495A1 244 aa9.46□□□□□ -0.9
NKX3-1-202ENST00000523261 SIGLEC15Q6ZMC9 328 aa9.46□□□□□ -0.9
NKX3-1-202ENST00000523261 FCGR1BQ92637 280 aa9.46□□□□□ -0.9
NKX3-1-202ENST00000523261 RNF125Q96EQ8 232 aa9.46□□□□□ -0.9
NKX3-1-202ENST00000523261 IGF2BP2-AS1Q96M15 143 aa9.46□□□□□ -0.9
NKX3-1-202ENST00000523261 TSC22D3Q99576 134 aa9.46□□□□□ -0.9
NKX3-1-202ENST00000523261 ATG5Q9H1Y0 275 aa9.46□□□□□ -0.9
NKX3-1-202ENST00000523261 FAM30AQ9NZY2 134 aa9.46□□□□□ -0.9
NKX3-1-202ENST00000523261 EBAG9O00559 213 aa9.45□□□□□ -0.9
NKX3-1-202ENST00000523261 CALRP27797 417 aaKnown RBP9.45□□□□□ -0.9
NKX3-1-202ENST00000523261 PAX9P55771 341 aa9.45□□□□□ -0.9
NKX3-1-202ENST00000523261 ERHP84090 104 aaKnown RBP9.45□□□□□ -0.9
NKX3-1-202ENST00000523261 FAM78BQ5VT40 261 aa9.45□□□□□ -0.9
NKX3-1-202ENST00000523261 LAIR2Q6ISS4 152 aa9.45□□□□□ -0.9
NKX3-1-202ENST00000523261 LINC00528Q8N1L1 170 aa9.45□□□□□ -0.9
NKX3-1-202ENST00000523261 BPIFB6Q8NFQ5 453 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms